Empidonax traillii (willow flycatcher): 114060024
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Entry
114060024 CDS
T05887
Symbol
SHROOM3
Name
(RefSeq) protein Shroom3 isoform X1
KO
K18625
protein Shroom
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
etl04812
]
114060024 (SHROOM3)
Cytoskeleton proteins [BR:
etl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
114060024 (SHROOM3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASD2
ASD1
PDZ
Motif
Other DBs
NCBI-GeneID:
114060024
NCBI-ProteinID:
XP_027744955
LinkDB
All DBs
Position
Unknown
AA seq
2014 aa
AA seq
DB search
MRMLDNINTSISSSECSITHKGRYIYLEALLHGGAPWGFTLKGGLEHGEPLIISKIEEGG
KADSLPSKLQAGDEVVNINEVELSSSRREAISLVKGSYKKLKLVVRRDTHAAKGCTDLSP
SPLVPDCVTTDFQPSKATWSGGVKLRLKTRRSETPGRPHSWHSTKLAENQPDPSMMQISQ
GTLGTPWHQSYHSSSSTSDLSGYEHGYLRRSPDQYSSRGSMESLDHSSPGYHPCHLSPAK
STNSIDQLSHLHSKRDSAYSSFSTNSSIPEYPTAPLGKEQCCSPDSAQCRAGPQEGLRQA
DIRYVRTVYDAQQRVSEEYEVKPSLLPSSDARASLDGRGHARLHGLGRHGTAPSWAQPDS
KSQPHKGPPLPPARSDSYAAIRHHERPGSGAGLDLSKPGRTQPKGAWTPLISSLSQGPLL
KPPFGDGHLHTVVEKSPESSPTLKPKQSYSQAAQPGQPLLPTGVYAVPSPEPHYAQVPQP
SAGNPGTLYPALAKESGYSPSLPVSFNKAAASGTLGFDENGNQSTTNRSTVFYQPPPAER
KLEAKLLQQKPPGTAGPELSLATSRKEELLPLYKAAQSHRETPGTPQASKPIFQAPQPQL
RDASERKSLYQPKEDWTAGSQEDKNGNAQLHEREAAAHHQWGHGKAKQYGFSSLQNIPES
SRRQSSSELRETQAGECYSNTKLSFLNSSSKEEKDHRGQGHRQWSDVDPQAFARQEEEEN
VSVTLFRAAEPKCKEPPSPQHPKTSDFGRSRLSSSSTQSIPYGKPEAGKPRCSVLEKVSK
FEQREQSSPRPQSAGIPSFGQHYGLSRTSQPSGTRGSLLSPEDVRSKLPTEPARGSSPSI
RNGKLDEADWHPVELQMVASVKQARPSDYYSLCPDHEGQVRAAQLPRSKSTFQLAGEPEK
DILWKDNIQDAHGSQLDTPFNRAYRNSIKDAQSRVLRATSFRRISPPFGSAPKRIPQRPA
SAHVGTRSTAPSPHTPKERHSITPTEGSLSALDYARTQHVLRIGGRRRLTAEQKKRSYSE
PEKMNEVGISDGEPSPFSFQKKSIHFVFPENTVADRRKIFERDGKASSTASLSKPELKQL
QQSALADYIERKTGRRPSSQDVGLRERSHSSYLQVGGTDSQSLSSASSMNSLQDQNLYRR
RESIERISRMGRMSSTVPVGLMDYLDTSGDERVGRQDSSGTSRPKAERCWDYRARTELTK
GTQTDPLGVQGQPRYRNQEQVFETPSTARKSGKSVSVEDLLDRYDNQPVPVHVRSRSSPT
ADKKHQELLRRESSEFGPMVRDPFYVVSAGARSFSKKERSRSERLAFTSYYPHPPRSSDV
VTGSAVLTENHKPSELSRPDSRTSAFFPAPTEARSHYPEQKQGFKPFLNLTPSGSAQPSP
APSDFQSTGEGQALRQHHAKPEALPAEGNRNIQAHPLDAMQDKSPETPMEEMVWRRKAGL
LHRSLPPKVAWAPPVKDNSSTRALVSPPAAGPKFSQRWQSLPTQSSTSSDPETPSPQGTT
QLRISESGLQLTPPPLLQDEGDDEVFIAPSQPPFSPPPPSRPLPELSSCTSANGTGEFPP
PLPAVALEGNGAAGDKSPRLPEEASVSFKSFPKAPAEREITRLGTSTGENNSPLSPTASK
RTSSPSAVDQQHQSPAASEGSQSTDTQPITQPEGDPREPELENTSPDSGMLGTAPPVKAK
KKTPEDIKSEALAKEIVHKDKSLADILDPDSKMKTTMDLMEGIFPSGTSLLKENNMKRKM
SQKQASRTAVREDTREEKEAPATLVTCPAYYSVSAPKAELLNKIKDLPEEVGEEEELLDI
NEKKAELIGSLTHKLEILKEAKEGLLADIKMNNALGEEVELLISTLCKPNEFDKYKMFIG
DLDKVVNLLLSLSGRLARVENVLSSLGENANSEERSSLNEKRKLLAGQHEDARELKENLD
RRERVVLEILGNYLSEEQLQDYQHFVKMKSALLIEQRELDDKIKLGQEQLKCLMESLPTD
FTPRDAAAAAALAAALATSAGVGGKTPPAASSSL
NT seq
6045 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgttagacaatattaacaccagcatatcatcttcagagtgcagcatcacccac
aaaggaagatacatctacctggaggcgctgctgcacggaggcgctccatggggattcacg
ctgaaaggagggctggagcacggcgagccattaatcatctcaaagatcgaagagggaggc
aaggcagactccctgccttccaagctgcaggctggtgatgaagtggtgaacatcaacgag
gtggagctgagcagctccaggagagaggccatctccctggtgaaagggtcctacaagaag
ctgaagcttgtcgtccgcagggacacgcatgcagcaaagggatgcaccgacctgtctccc
agcccactcgttccggactgtgtgaccactgacttccagcccagcaaagccacgtggtct
ggaggagttaagttacggctgaagaccaggcggagtgaaactccaggccgacctcactcc
tggcattcaaccaaacttgcggagaaccaacccgatcccagcatgatgcaaatatctcag
ggtacgcttggcaccccttggcatcagtcctaccactccagctcctccaccagcgatctc
tctggctatgagcatggctatctgaggaggagtccggatcagtacagctcccggggcagc
atggagagcttggaccactcctcccccggctaccacccttgtcacctgtccccggccaaa
tccaccaacagcatcgaccagctctcccacctgcacagcaagagggactctgcctacagc
tccttctccaccaactccagcatccccgagtatcccaccgccccgctgggcaaggagcag
tgctgctccccggacagcgcgcagtgccgggccgggccgcaggagggcctgaggcaggcg
gacatcaggtacgtgcggacggtgtacgacgcccagcagcgcgtctccgaggagtacgag
gtgaagccctccctgctcccgagcagcgatgcccgggcctcgctggacggccgcggccac
gccaggctgcacggcctgggccggcacggcacggctccctcctgggcgcagcccgacagc
aagagccagccccacaagggaccccccttgcctcccgctcgcagcgacagctacgcggcc
atcaggcaccacgagaggcctggctcgggcgccggcctggatctgagcaagcctggccgg
acccagcctaaaggggcctggacgccgctgatcagctccctgtcccagggcccgctgctg
aaaccccccttcggagacgggcatctgcacaccgtggtggagaagagcccggagagcagc
cccaccctgaagcccaagcagagctattcccaggcagcccagccggggcagcccctgctg
cccactggtgtctacgccgtgccctccccagagccgcactatgcccaggtgccccagcct
tccgcgggcaatcccgggacgctttacccagctctggccaaagaaagcgggtactctcca
tccctcccagtctccttcaacaaggccgcagccagcggcaccctgggctttgatgagaat
ggaaaccaaagcactacaaacagatccaccgtcttctaccagcctcccccagctgagaga
aagctggaagccaaacttctccagcagaaacctcccggcacagcaggcccggagctctcc
ctggccacgtcacggaaggaggagctgttacccctttacaaggcagcacaaagccaccga
gagaccccaggtaccccccaggcctccaaacccattttccaggctccacagccccagctg
agggatgctagtgagagaaaatccctttaccagcccaaagaggactggacagctggatcc
caggaggacaaaaatggcaacgcacagttacatgagagagaagctgctgctcatcaccag
tggggtcacggcaaggccaagcagtacggcttctcctccctgcagaacatcccagagagc
tccaggaggcaaagcagctccgagttaagagagacacaagcaggcgagtgttattccaac
accaaactgtccttcctgaacagcagcagcaaagaggagaaggatcacaggggacagggc
cacagacagtggagcgatgtggacccacaggccttcgcgaggcaggaggaggaggagaac
gtgagcgtgactctgttccgtgctgctgagccaaagtgcaaagagcctccttctccgcag
cacccaaagacctcagatttcgggaggagccggctcagctccagcagcacccaaagcatt
ccctacggcaaaccagaagctggcaagccccgctgctcggtgctggagaaggtcagcaag
tttgagcagcgggagcagagcagcccccggccccagagcgctggcattcccagcttcggc
cagcactatgggctgagcaggacgagccagccctctggcaccaggggctccctgctcagc
ccggaggatgtgcggagcaagctgcccacggagccagccaggggctccagcccctccatc
aggaacgggaagctggacgaggctgactggcaccccgtagagctgcagatggtggcttcg
gtgaagcaggcgagacccagtgactactacagcctgtgtcccgaccacgaggggcaggta
agggcggcccagctgccgcgcagtaaaagcacgttccagctggcaggggagcctgagaaa
gacatcctctggaaggacaacatccaggacgcccacgggtcgcagctggacacgccattt
aacagggcctacaggaacagcataaaggatgcccagtccagggtgctgagggccacctcg
ttccgtcgcatcagccccccgttcgggagcgctcccaagaggatcccccagcgtcctgcc
tcggcccacgtgggcacaaggagcacggcgccgtctccgcacacgcccaaggagaggcac
agcatcacgcccacggaaggcagcctctccgcgctggactacgccaggacgcagcacgtg
ctgcgcatcgggggccgcaggcggctgacggcggagcagaagaagcgctcctactcggag
ccggagaagatgaacgaggtgggcatctcggatggggagccatcgcccttctccttccag
aagaagagcatccattttgtcttcccggagaacacggtggctgaccggcggaagatcttc
gagagggacggcaaggcttcctccacagccagcctgtccaagcctgagctcaagcagctc
cagcagagcgcccttgccgactacatcgagcggaaaacggggagacggccgtcctcgcag
gacgtggggctgagggagcgctcccacagctcctacctgcaggtggggggcacagacagc
cagagcctttcctctgcctccagcatgaattccctgcaggaccagaacctttaccgccgg
agggagtccatagagcggatatccaggatgggacggatgtcttctaccgttcctgtgggg
ctgatggactacttggacacgagtggagatgagagggtggggcgccaggacagctcaggc
acaagccggccaaaagcagagaggtgctgggattacagagccaggacggagctcaccaaa
ggcacccagacagacccgctgggcgtgcagggccagcctcgctacaggaaccaggagcag
gtctttgaaacaccctccaccgccaggaaatcggggaaatcggtgtccgtggaagacctg
ctcgataggtacgacaatcagcccgtccctgtgcacgtacgttccagatcgtctccgacg
gcggataagaaacaccaggagctgctgagaagggagagcagtgaattcggccccatggtg
agggatcccttctacgtggtcagcgcaggagccaggtctttcagcaagaaagaaagaagc
cgctcagagagactggcattcaccagttactatccccaccctccccgcagcagcgatgtt
gtcactgggtctgccgtgctgacagagaaccacaagccctcagaactttccaggccagat
agcaggacttctgcatttttcccagccccaacagaggcaaggagtcactatcccgagcaa
aagcaaggctttaaaccgttccttaaccttacaccttctggatctgcccagccctccccg
gctccctcagacttccagagcacgggcgagggccaggctctgagacagcaccatgccaaa
ccagaggctcttcccgctgagggcaacaggaatatccaggcacatcccttggatgccatg
caggataaatccccggagactcccatggaagaaatggtgtggagaaggaaggccgggctg
ctccacagatccctgccccccaaagtggcgtgggctcctccggtcaaggacaacagctcc
accagggccctggtgtctcccccagcggctgggcccaagttctcccagaggtggcagtcc
ttgcccacacagagcagcacttcttccgacccggagactccctctccccaggggaccacc
cagctgcggatctcggagtcggggctgcagctcacgcccccgcccttgctgcaggacgag
ggggacgatgaggtgttcatcgcgccttcccagccgcccttctccccaccgccaccatcc
cgtcctcttcccgagctcagctcttgcacttctgccaacggcaccggggaattcccacct
cccctcccggccgtggcacttgaggggaatggggcagctggagacaaatccccccggctc
ccagaggaggccagcgtgagcttcaaaagctttcccaaagccccggccgagagggagatc
acacggttgggcaccagtactggtgaaaataactcgcccctctcaccaactgcatcaaag
aggactagctctccatctgctgtggaccagcagcaccagtcacctgctgcttctgaaggg
tctcaaagcactgatacacagcccataactcagcctgaaggtgaccccagagagccagag
ttggaaaacaccagccccgactctgggatgctcggcacagcacccccagtgaaggcaaag
aaaaagaccccagaggacattaagtcagaggctctggcaaaagaaattgtccacaaagac
aagtctctggcagatatcctggatccagattccaaaatgaagactaccatggacttaatg
gaagggattttccccagcggaaccagcttgctgaaggagaacaacatgaagaggaagatg
tcgcagaagcaagccagcaggacggccgtcagggaggacacgagagaggaaaaggaagct
cctgccaccctggtcacctgtcctgcttattacagcgtttcagcacccaaagcagagctg
ctaaataaaatcaaggacttgccagaagaagtaggcgaggaagaggagctgctggacatc
aatgagaagaaggctgagctcatcgggagcttgacccacaaactggaaatcctgaaggaa
gccaaggagggcctgctcgcagacattaagatgaataacgccctcggagaggaggtggag
ctgttgatcagcacgctgtgcaaacccaacgagtttgacaagtacaagatgttcattggc
gatctggataaggtggtgaacctcttactctccctctcgggacgcctggcccgtgtggag
aatgtcctgagtagtctgggggaaaatgccaacagtgaggagcggagctcactgaacgag
aagaggaagctgctggctggccagcacgaagacgcccgggaactcaaggaaaaccttgac
cgtagggaacgggtggtcttggagatcctgggcaactacctctccgaggagcagctccag
gattaccagcactttgtgaagatgaagtccgcgctcctcatcgagcagcgggagctggat
gataaaatcaaactgggccaggagcagctcaagtgcctcatggaaagcctccccacggac
ttcacacccagggatgcagcggcagcagctgccctggctgcagcacttgctacctccgcg
ggggtcggtggtaaaacacctccagcagcctcttcctcactctaa
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