Empidonax traillii (willow flycatcher): 114060031
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Entry
114060031 CDS
T05887
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114060031 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114060031 (NUP54)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114060031 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
114060031
NCBI-ProteinID:
XP_027744968
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MAFNFGGTAGAGAANPSGAFGGFGTTTTTAAPAFSFSAPTNTGTGGLFGATQNKGFGFGT
SFGTGTGTGLGSGLGTGLGFGGFGTQQQQTTLGSGLFSQPAQTPAQSNQLINTASALSAP
TLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPNNKDE
DGLVVLVFNRKEADIRSQQQQLVESLHKILGGNQTLTINIEGVKTMPDDQTEVIIYVVER
SPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAGVDPI
IWEQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTT
TMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQF
KGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDLED
IKLIEHGLNESIPIRGGVFS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcggcggaacggcgggagccggggccgccaacccgagcggagcgttc
ggagggtttggcaccaccaccaccaccgcggcaccggcattcagcttctctgcgcccacc
aacacgggcaccggtggactctttggtgccacccagaacaaaggctttggatttggcact
agttttggcacaggaactggaactggcttgggtagtgggttgggaactgggcttggcttt
ggaggctttggaacccagcagcagcagaccacgttaggtagcgggttgttcagtcagcct
gcccagacacccgcccagtccaaccagctcatcaatacagccagcgccctgtcagctccg
acactcctgggggatgagagggatgccatcctggccaagtggaaccagctgcaggccttc
tggggaacgggcaaagggtacttcaacaacaacatcgctcccgtggagttcacccaggaa
aaccccttctgcaggtttaaggctgtgggttacagtctaatgcccaacaataaagacgaa
gatggcctcgtggttttggtgtttaacagaaaagaagcagatattcgaagccagcagcag
cagcttgtggagtcactacacaaaattctggggggaaaccagaccctcactatcaacatc
gaaggggttaaaacgatgccagatgaccagacagaggtgatcatttacgttgtggagcgc
tcgcccaacggcacctcgaggagagttcccgccaccaccctctacgcccacttcgaacaa
gccaacatcaagtcgtccctgcagcagctgggggtcagcctctccatggccaggacagag
ctgtccccagcacaggtcaaacagctcctgcagaaccctcctgccggtgttgatcctatt
atttgggaacaagccaaagttgataatcctgatcctgaaaagcttattcctgtgccaatg
gtgggcttcaaggaactgttgagaagattgaaggtccaagatcagatgaccaagcagcat
caaactcgattagatataatatcagaagatatcagcgagctgcagaaaaaccaaacaaca
actatggcaaaaatcgcacagtacaaaaggaagctgatggcactttctcacagaacattg
caggtgttaataaagcaggagatccaaaggaaaagtggttatgccatccaagcagatgag
gagcagctccgtgtacagttggatacgattcagtgtgaacttaacgcaccaacgcagttc
aagggcagactgaatgagctcatgtcccagatcaggatgcagaaccactttggagcagtg
cgggctgaagagcgctattacatagatgcagacctcttaagggaaatcaagcaacacctg
aagcagcagcaagaaggactcagtcacctaatcagcatcatcaaggatgacttggaggac
atcaagctaatagaacacgggctgaatgagagcattcccatcagaggaggagtcttcagt
tga
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