Empidonax traillii (willow flycatcher): 114060176
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Entry
114060176 CDS
T05887
Symbol
SDK1
Name
(RefSeq) protein sidekick-1 isoform X1
KO
K16353
protein sidekick
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etl04515
]
114060176 (SDK1)
Cell adhesion molecules [BR:
etl04515
]
Immunoglobulin superfamily
Other
114060176 (SDK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Fn3_VIN3
V-set
Tissue_fac
Ig_RIMBP2
Ig_Rha78A_N
Ig_5
C1-set
Motif
Other DBs
NCBI-GeneID:
114060176
NCBI-ProteinID:
XP_027745260
LinkDB
All DBs
Position
Unknown
AA seq
2271 aa
AA seq
DB search
MCFTFLTGCFGAINTSTRNIDLGGDCHSGRHTECSSRLAGRVSTNQRARRSWEAGASLPP
GLRGRGSRATPGSPARRCGMSNDQSAVRSGGQPDPMGISEARAVERKVDREIIARRNSRR
GGMMIKLNFCFIFCRGWWAFLLLQLHMLQALAQDDVAPYFKTEPGLPQIHLEGNRLVLTC
LAEGSWPLEFKWLHNDSEITSYSSEYKYIIPALQRSDGGFYQCIVRNRMGALLQRRSEVQ
VAYMGDFMDTDQRKTVTEGQAAVLNFPRILSHPRPQVTWFRDGHKIIPSSRIAITLENQL
VILGTSATDAGGYYVQAVNEKNGENKTSPFIHLNVASAADPSELLAPAIVIRPHNTSVVA
GSSEATLECVANARPLEKLSVTWKRNGIKITSGISSFGRRLTITNPTSADVGMYICEAKL
RESTEEPARAKAFLSILEPPYFTAEPESLILAEVEKDVDILCQAMGVPIPTLVWYKDSVP
LSKLENPRYKVLLSGGLRIHSLRPQDAGIFQCFASNKAGEIQTYTYLDVTNIKPAFIQPP
EDTTVTEGMTAVLTCEVSGAPRPAISWKKGNRILASGSVQIPRFVLLESGGLQITPVFLQ
DAGNYTCCAVNSEGALNAFVMLTVWNRTSIVRPPEDSTVIKGTTATLHCEATHDPRISIR
YLWKKDSVVINPSSSSRITVEKDGTLLISQTWSGDIGDYTCEVISSGGNDSRMARLEVIE
LPHSPQNLLATLNSSHSRSVMLSWVRPFDGNSPVLYYVVELSENNSPWKVHLSDLDPKMT
SVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIM
VQWQPPPESEHNGVLHGYILRYRLAGLPGEYQYKNITSAEINYCLVKDLIIWTQYEIQVA
SYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWNPPPQQFINGINQGYK
LLAWPVDAPESVTVVTIAPDFHGVHSGCITNLKKYTTYYASVLCFTTPGDGPRSTPQLLR
TLEDKPGAVGHLSFTEILDTSLKVSWQEPVEKNGIITGYQISWEVYGRNESRLARTLSNT
TLEYKITGLSSLTTYTIEVAAVTAKGSGWVTSSTISSGVPPELPGAPSNLVISNISPRSA
TLQFRPGYDGKTSISKWIVEGQVGVLGDEEEWVSLHEVENEPDAQMLEVPNLTPYTHYRF
RMRQVNVVGASPLSQPSRVIQTLQAPPDVSPGSVTVRTASETSLWLRWVPLPDTQYNGNP
ESVGYRIRFWRVDLQSPVLTKVVNDRLEREYTVEDLEEWTEYELQIQAFNAIGAGPWSEV
VRGRTRESVPSAPPENVTAEAVSSTQILLTWAAVPESEQNGLILGYKILFKAKDFDSEAK
SQTVRGNHTQSVLLSGLRKYVLYEIQVLAFTRIGDGVPSSPAVIERTKDDAPGPPVRLVF
PEVRLTSVRIVWQPPEEPNGIILGYQVAYRLASSSPNKFTTVEVGSTVRQFTATDLTPES
AYIFRTSAKTRQGWGEPLEATVITTEKRERPAPPRQVMTPQSDVSSRSLLLKWVPGSDGS
SPIRYFTVQVRELPNGDWQTYSSSISHEATSCVIESLNPFTSYKLRVKATNDIGDSDFSA
ETEAVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQPPKVESLNGLLLGYRIYYRELDYDAG
PGTESKNIQNPSALRAELTPQSSFKTVNSSSALTTYELTQLKKYKRYEVLMTAYNVIGES
PTSTPVEVFVGEAAPALAPQNIQVNSLSASQLELTWDPPPADSQNGNIQGYKIYYWESDT
QNDTEKVKVLFLPETTVRLKNLTSHTRYMVCISAFNAAGDGPRSSPSQGRTHQAAPSAPS
FLAFSEITCTTLNVSWGEPTAANGVLQGYRVVYEPLAPVQGVSKVVTVDIKGNWQRWLKV
RDLTKGMTYLFRVQARTIAYGPELQANITAGPAEGSPGSPQEILVTKSSSGLTLRWTEGD
SGEKPTTGYIIEARPSDEGLWDMFVKDIPRSATSYTVGLDKLRQGVTYEFRVVAVNEFGY
GEPSVPSVAVSAQTEAPFYEEWWFLLVMALSSLILILLVVFALVLHGQSKKYKNCNGGKT
ISNVEESVTLDNGGFTALELNSRHLNIKSTFSKKNGTRSPPRPSPGGLHYSDEDICNKYN
GAVLTEGLGLNEKPLEVSESEVTDSDYEDELPKHSFVNHYMSDPTYYNSWKRQQKGVKHP
ASYRYEECTASETEPYFQTVITTQSSGGVYTPTGQPAPGSRTPVTGFSSFV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttcacatttctgactggttgttttggtgcaatcaatacctccacgagaaacatt
gacttaggtggcgactgtcatagcgggaggcacacggagtgcagctctcggcttgcaggc
agagtgagcacaaatcaaagagcccgccgttcctgggaagcgggggcttcgcttcccccc
ggactgcggggcagaggctcccgagccaccccggggagcccggcccggcggtgcggaatg
agcaatgaccaaagcgctgtcaggagtggcgggcagccggatccgatggggatcagtgag
gcaagagcggttgaaagaaaggtggatcgcgaaattattgcccgaaggaatagcaggcga
ggcggaatgatgataaagttaaacttctgtttcatcttctgtcggggatggtgggcgttt
ctgttgcttcagctccacatgttgcaagcactggcacaagatgatgttgccccatacttc
aagacagagccaggcttgccccagatacacttggaagggaaccgactcgtcctgacgtgc
cttgccgaaggcagctggcccttggagttcaagtggttgcacaacgacagcgaaatcacc
tcctactccagtgaatacaagtacatcatcccagctctgcagaggtctgatggtggcttt
tatcagtgcattgtacggaacaggatgggggccctgctgcagaggagatctgaagtccaa
gtggcatacatgggagatttcatggacacagaccagagaaaaacagtgactgaaggacaa
gctgcagttctgaacttcccacgcatcctcagccacccgagaccccaagtgacgtggttt
cgagacgggcacaagattatcccgagcagcagaatagccatcaccctggagaatcagctg
gtgatccttggaacatcagcgaccgacgcaggaggttactatgtccaggcagtcaatgaa
aagaacggggagaacaagacaagtccctttattcatctcaacgtagcaagtgctgcagac
ccctctgagctcctggctcccgccatcgtcatccgtccccacaacaccagcgtggtcgcc
gggagcagcgaggccactctggagtgcgtggccaacgccagacctcttgagaaactaagt
gtgacctggaagagaaatggaataaagataaccagtggcattagcagctttgggaggcga
ctcactatcaccaacccaacctctgctgatgtggggatgtacatctgtgaagcaaaactg
agagagagcacagaggaaccagcaagagcaaaagccttcctttctatactggaaccaccg
tattttacggctgagcccgagagcctgattttggctgaggtggagaaggacgtggacatc
ctgtgccaggccatgggtgttcccattcccaccctggtgtggtacaaggactctgttccc
ctcagcaagctggaaaacccccgttacaaagtgctgctgagtggtgggctgaggatccac
tccctgcgccctcaggatgccggaatcttccagtgttttgccagtaacaaagctggggag
atccagacctacacctacctggatgtgaccaacattaaaccagcatttatccagcctcca
gaggacaccacagtcacggaggggatgactgcagtgctgacctgtgaagtgtcaggggct
ccaagacctgccatctcatggaagaaagggaaccggatcttagccagtggctcagttcag
attcctcgcttcgttcttctcgaatctggagggctccagataacacccgttttcctccag
gatgctggcaattatacttgctgtgcagtcaactctgaaggagctctgaatgcttttgtg
atgctgacagtgtggaatcgcacctccatcgtccgccctcccgaggacagcactgtgatc
aaaggaaccacggccaccctgcactgcgaggcgactcatgatcccagaatttcaatcagg
tacctttggaagaaggacagtgttgtaataaatccatccagcagttccaggatcacagta
gagaaagatggaaccctcctcatcagccagacgtggtcaggtgacattggagattatacc
tgtgaggtcatttcttcaggaggaaacgactccagaatggctcgcctagaagtgattgag
ctgcctcattcccctcagaatcttctggccactctgaattcctcccacagccggagcgtg
atgctctcctgggtgcgccccttcgatgggaacagccccgtgctctactacgtggtcgag
ctctccgagaacaattccccctggaaggttcacctctcagaccttgaccccaagatgacc
agtgtcactgtgagtggactcaccccagccaggacctaccagttcagggtgtgtgcagtc
aaccaggtgggaaagggccagtacagcactgagaccagcaggttgatgttaccagaggag
cctcccagtgccccaccaaaaaacatagtggccagtgggcgaaccaatcagtctatcatg
gtccagtggcagcctcctcctgagagtgagcataatggagttcttcatggctacatccta
aggtatcgcctggccggcctccctggagaataccagtataagaacatcaccagtgcagaa
atcaactactgcttagtgaaagacctgatcatttggacccagtatgaaatccaggtggca
tcttacaatggagctgggctgggagccttcagcagacccgtgacagagtacactttacag
ggagtgcccacggctccaccacagaacgtgcaagtcgaagccgtgaactccacaaccatc
cagttcctctggaaccctccgccccagcagttcatcaacggcatcaaccaaggatacaag
cttctggcctggccggtggacgctccagagagcgtgactgtggtcaccatcgctccggat
ttccatggagttcacagtggctgcatcaccaacctgaagaaatacaccacttactacgcc
tcagttctgtgcttcaccacgccaggggacggccctcggagcacaccccagctcctgcgc
accctggaggacaagccaggagcagtggggcacctgagtttcaccgagatcctggacacc
tcgctcaaggtcagctggcaagagcctgtggagaaaaacggcatcatcacagggtaccag
atctcctgggaggtgtatggcaggaatgagtctcgcctggcccgcacactgtccaacaca
accctggagtacaagatcacggggctctcgtccctcaccacctacaccatcgaggtggca
gctgtgactgccaaagggagcgggtgggtcacgtcctccaccatctcctctggcgtgccc
ccagaacttccaggtgctccatccaacctggtgatttccaacatcagccctcgctctgcc
acgcttcagttccgtccaggatacgacggcaaaacctccatctccaagtggatagttgaa
ggccaggttggtgtgctgggtgatgaggaggaatgggtgagtcttcatgaggtggagaat
gaacctgatgctcagatgctggaggtaccaaaccttactccttacactcattacaggttc
cggatgaggcaggtgaacgtggtgggtgccagccccctgagccagccctccagggtcatc
cagacgctgcaggcccctccggatgtgtcccccgggagcgtcaccgtgcgcacggccagc
gagaccagcctgtggctgcgatgggtgcccctccctgacacgcagtacaacggcaatccg
gagtcagtggggtacaggatcaggttctggcgtgtggacctgcagtcccctgtcctgacg
aaggtcgttaatgacagactggagagagagtacacggtggaagacctggaggagtggaca
gagtatgagctgcagatccaggccttcaacgccatcggggcagggccgtggagcgaagtc
gtgaggggccgtacccgagagtctgttccctctgctcctcctgagaatgtcactgctgaa
gctgtgagttccacccagatcctgctgacatgggctgcagtccctgagtctgagcagaat
ggtctcatcctggggtacaagatccttttcaaagcgaaagatttcgactctgaagcaaag
agccagacggtgagagggaaccacacccagtctgtcctgctctcgggcctgcggaaatac
gtcctgtacgagatccaggtgctggcgttcactcggatcggagatggagtccccagctct
cctgcagtgatagagagaaccaaggacgatgcccctggcccccccgtgaggctggtgttc
cccgaggtgaggctgacatctgtacggattgtttggcagccaccggaggagcccaatgga
attatcctggggtaccaggtcgcctatcgcctggccagcagcagccccaacaagttcacc
acggtggaggtcggctcgacggtgcggcagttcacggccacagacctcaccccggagtca
gcctacatcttcaggacgtccgccaagaccaggcagggctggggggagcccctggaagcc
acggtgatcaccacagagaaacgagaacgaccagcacctcccaggcaggtgatgaccccc
cagagcgacgtgtcctcccggagtctgctgctgaagtgggtccctggaagtgatggatct
tccccgatccgatacttcacagtccaagtgcgagaactgcccaatggagactggcaaacc
tactcctcttccatcagccacgaggcgacgtcctgcgttatcgaaagcttgaaccccttc
acctcttacaaactgcgagtgaaggcaaccaacgatatcggggacagcgacttcagtgcg
gagacagaggcggtcacgactctgcaggatgttccagatgaaccacccagttctgtgtta
gtgactccccacacgacttcctctgtccttgtgcagtggcagccgcccaaagtggagagt
ctgaatggtttgctgttgggataccggatctactaccgggagctggattatgacgctgga
cctggaacagaatccaaaaacatccagaacccttcagctctaagggcagagctcacaccc
caaagcagcttcaagacagtgaacagcagctctgcattaacgacgtatgaattaacacag
ttgaaaaaatacaagagatatgaagtactaatgacagcatacaatgtcattggtgagagc
cctaccagcacaccggtggaagtgtttgtgggtgaagcagcaccggcgctggccccacag
aacatccaagtaaactccctctctgcaagccagctggagctcacctgggacccccctcct
gccgacagccaaaatgggaacatccaaggctacaagatttattactgggagagcgacacc
cagaacgacacggagaaggtgaaggtccttttcctcccggagacaacggtgcggctgaag
aacctgacgagccacacgcggtacatggtctgcatctccgccttcaacgccgccggggat
ggcccccgcagcagcccctcgcagggcaggacgcaccaggcggcacccagtgctcccagc
ttcttggcgttctctgaaatcacttgcactacactcaatgtgtcttggggcgagccgaca
gcagcaaatggagtcctgcagggttatcgagtagtctatgagcctctggctcccgtccag
ggggtgagcaaggtggtgactgtggacattaaagggaactggcagcgctggttgaaggtc
cgtgatctcaccaagggcatgacctatttattccgagtgcaagcccgaaccattgcctat
ggacctgaactgcaagccaacatcacagctgggccagcagaagggtctcctggctcccct
caggaaattctggtgacaaaatcttcttctgggctgacgctgcgatggactgagggagat
tcaggagaaaaacccacaactggttacattatagaggcacgaccctcagatgaaggactc
tgggatatgtttgtgaaggacatccctcgcagcgccacctcctacacagtcggcctggac
aagctcagacagggggtcacctatgaatttcgggtggtggctgtcaacgaatttggctat
ggagagccaagtgttccgtctgtggcagtatcagcacaaacagaagcccctttctacgag
gagtggtggtttctgctggtgatggctctctccagcttgatcctcatcctcctggtggtg
tttgcattggtcctgcatggccagagcaagaagtacaagaactgcaacggaggtaaaacc
atctccaatgtggaagagtcggtcaccctggataacggaggcttcactgctctggagctc
aacagcagacacctgaacatcaagagcaccttctcaaagaaaaatggaaccaggtctcct
cctcgcccaagcccaggggggctgcactactctgatgaggacatctgcaacaagtacaat
ggagctgtgctgaccgagggcttgggcctcaacgagaagcccttggaagtgtcggagtca
gaggtcacggactcagactacgaggacgagctgccaaagcactccttcgtgaaccactac
atgagcgaccccacctactacaactcgtggaagcggcagcagaaaggggtgaagcacccg
gcgtcctacagatacgaggagtgcaccgccagcgagacagaaccctatttccagactgtc
atcacgacacagagctcaggaggggtgtacacccccacgggacagcccgcgcccggctcc
cggactccagtgacagggttctcctccttcgtctga
DBGET
integrated database retrieval system