KEGG   Empidonax traillii (willow flycatcher): 114060176
Entry
114060176         CDS       T05887                                 
Symbol
SDK1
Name
(RefSeq) protein sidekick-1 isoform X1
  KO
K16353  protein sidekick
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:etl04515]
    114060176 (SDK1)
Cell adhesion molecules [BR:etl04515]
 Immunoglobulin superfamily
  Other
   114060176 (SDK1)
SSDB
Motif
Pfam: fn3 Ig_3 I-set FN3_DSCAM-DSCAML_C Pur_ac_phosph_N Ig_2 ig Fn3_VIN3 V-set Tissue_fac Ig_RIMBP2 Ig_Rha78A_N Ig_5 C1-set
Other DBs
NCBI-GeneID: 114060176
NCBI-ProteinID: XP_027745260
LinkDB
Position
Unknown
AA seq 2271 aa
MCFTFLTGCFGAINTSTRNIDLGGDCHSGRHTECSSRLAGRVSTNQRARRSWEAGASLPP
GLRGRGSRATPGSPARRCGMSNDQSAVRSGGQPDPMGISEARAVERKVDREIIARRNSRR
GGMMIKLNFCFIFCRGWWAFLLLQLHMLQALAQDDVAPYFKTEPGLPQIHLEGNRLVLTC
LAEGSWPLEFKWLHNDSEITSYSSEYKYIIPALQRSDGGFYQCIVRNRMGALLQRRSEVQ
VAYMGDFMDTDQRKTVTEGQAAVLNFPRILSHPRPQVTWFRDGHKIIPSSRIAITLENQL
VILGTSATDAGGYYVQAVNEKNGENKTSPFIHLNVASAADPSELLAPAIVIRPHNTSVVA
GSSEATLECVANARPLEKLSVTWKRNGIKITSGISSFGRRLTITNPTSADVGMYICEAKL
RESTEEPARAKAFLSILEPPYFTAEPESLILAEVEKDVDILCQAMGVPIPTLVWYKDSVP
LSKLENPRYKVLLSGGLRIHSLRPQDAGIFQCFASNKAGEIQTYTYLDVTNIKPAFIQPP
EDTTVTEGMTAVLTCEVSGAPRPAISWKKGNRILASGSVQIPRFVLLESGGLQITPVFLQ
DAGNYTCCAVNSEGALNAFVMLTVWNRTSIVRPPEDSTVIKGTTATLHCEATHDPRISIR
YLWKKDSVVINPSSSSRITVEKDGTLLISQTWSGDIGDYTCEVISSGGNDSRMARLEVIE
LPHSPQNLLATLNSSHSRSVMLSWVRPFDGNSPVLYYVVELSENNSPWKVHLSDLDPKMT
SVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIM
VQWQPPPESEHNGVLHGYILRYRLAGLPGEYQYKNITSAEINYCLVKDLIIWTQYEIQVA
SYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWNPPPQQFINGINQGYK
LLAWPVDAPESVTVVTIAPDFHGVHSGCITNLKKYTTYYASVLCFTTPGDGPRSTPQLLR
TLEDKPGAVGHLSFTEILDTSLKVSWQEPVEKNGIITGYQISWEVYGRNESRLARTLSNT
TLEYKITGLSSLTTYTIEVAAVTAKGSGWVTSSTISSGVPPELPGAPSNLVISNISPRSA
TLQFRPGYDGKTSISKWIVEGQVGVLGDEEEWVSLHEVENEPDAQMLEVPNLTPYTHYRF
RMRQVNVVGASPLSQPSRVIQTLQAPPDVSPGSVTVRTASETSLWLRWVPLPDTQYNGNP
ESVGYRIRFWRVDLQSPVLTKVVNDRLEREYTVEDLEEWTEYELQIQAFNAIGAGPWSEV
VRGRTRESVPSAPPENVTAEAVSSTQILLTWAAVPESEQNGLILGYKILFKAKDFDSEAK
SQTVRGNHTQSVLLSGLRKYVLYEIQVLAFTRIGDGVPSSPAVIERTKDDAPGPPVRLVF
PEVRLTSVRIVWQPPEEPNGIILGYQVAYRLASSSPNKFTTVEVGSTVRQFTATDLTPES
AYIFRTSAKTRQGWGEPLEATVITTEKRERPAPPRQVMTPQSDVSSRSLLLKWVPGSDGS
SPIRYFTVQVRELPNGDWQTYSSSISHEATSCVIESLNPFTSYKLRVKATNDIGDSDFSA
ETEAVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQPPKVESLNGLLLGYRIYYRELDYDAG
PGTESKNIQNPSALRAELTPQSSFKTVNSSSALTTYELTQLKKYKRYEVLMTAYNVIGES
PTSTPVEVFVGEAAPALAPQNIQVNSLSASQLELTWDPPPADSQNGNIQGYKIYYWESDT
QNDTEKVKVLFLPETTVRLKNLTSHTRYMVCISAFNAAGDGPRSSPSQGRTHQAAPSAPS
FLAFSEITCTTLNVSWGEPTAANGVLQGYRVVYEPLAPVQGVSKVVTVDIKGNWQRWLKV
RDLTKGMTYLFRVQARTIAYGPELQANITAGPAEGSPGSPQEILVTKSSSGLTLRWTEGD
SGEKPTTGYIIEARPSDEGLWDMFVKDIPRSATSYTVGLDKLRQGVTYEFRVVAVNEFGY
GEPSVPSVAVSAQTEAPFYEEWWFLLVMALSSLILILLVVFALVLHGQSKKYKNCNGGKT
ISNVEESVTLDNGGFTALELNSRHLNIKSTFSKKNGTRSPPRPSPGGLHYSDEDICNKYN
GAVLTEGLGLNEKPLEVSESEVTDSDYEDELPKHSFVNHYMSDPTYYNSWKRQQKGVKHP
ASYRYEECTASETEPYFQTVITTQSSGGVYTPTGQPAPGSRTPVTGFSSFV
NT seq 6816 nt   +upstreamnt  +downstreamnt
atgtgtttcacatttctgactggttgttttggtgcaatcaatacctccacgagaaacatt
gacttaggtggcgactgtcatagcgggaggcacacggagtgcagctctcggcttgcaggc
agagtgagcacaaatcaaagagcccgccgttcctgggaagcgggggcttcgcttcccccc
ggactgcggggcagaggctcccgagccaccccggggagcccggcccggcggtgcggaatg
agcaatgaccaaagcgctgtcaggagtggcgggcagccggatccgatggggatcagtgag
gcaagagcggttgaaagaaaggtggatcgcgaaattattgcccgaaggaatagcaggcga
ggcggaatgatgataaagttaaacttctgtttcatcttctgtcggggatggtgggcgttt
ctgttgcttcagctccacatgttgcaagcactggcacaagatgatgttgccccatacttc
aagacagagccaggcttgccccagatacacttggaagggaaccgactcgtcctgacgtgc
cttgccgaaggcagctggcccttggagttcaagtggttgcacaacgacagcgaaatcacc
tcctactccagtgaatacaagtacatcatcccagctctgcagaggtctgatggtggcttt
tatcagtgcattgtacggaacaggatgggggccctgctgcagaggagatctgaagtccaa
gtggcatacatgggagatttcatggacacagaccagagaaaaacagtgactgaaggacaa
gctgcagttctgaacttcccacgcatcctcagccacccgagaccccaagtgacgtggttt
cgagacgggcacaagattatcccgagcagcagaatagccatcaccctggagaatcagctg
gtgatccttggaacatcagcgaccgacgcaggaggttactatgtccaggcagtcaatgaa
aagaacggggagaacaagacaagtccctttattcatctcaacgtagcaagtgctgcagac
ccctctgagctcctggctcccgccatcgtcatccgtccccacaacaccagcgtggtcgcc
gggagcagcgaggccactctggagtgcgtggccaacgccagacctcttgagaaactaagt
gtgacctggaagagaaatggaataaagataaccagtggcattagcagctttgggaggcga
ctcactatcaccaacccaacctctgctgatgtggggatgtacatctgtgaagcaaaactg
agagagagcacagaggaaccagcaagagcaaaagccttcctttctatactggaaccaccg
tattttacggctgagcccgagagcctgattttggctgaggtggagaaggacgtggacatc
ctgtgccaggccatgggtgttcccattcccaccctggtgtggtacaaggactctgttccc
ctcagcaagctggaaaacccccgttacaaagtgctgctgagtggtgggctgaggatccac
tccctgcgccctcaggatgccggaatcttccagtgttttgccagtaacaaagctggggag
atccagacctacacctacctggatgtgaccaacattaaaccagcatttatccagcctcca
gaggacaccacagtcacggaggggatgactgcagtgctgacctgtgaagtgtcaggggct
ccaagacctgccatctcatggaagaaagggaaccggatcttagccagtggctcagttcag
attcctcgcttcgttcttctcgaatctggagggctccagataacacccgttttcctccag
gatgctggcaattatacttgctgtgcagtcaactctgaaggagctctgaatgcttttgtg
atgctgacagtgtggaatcgcacctccatcgtccgccctcccgaggacagcactgtgatc
aaaggaaccacggccaccctgcactgcgaggcgactcatgatcccagaatttcaatcagg
tacctttggaagaaggacagtgttgtaataaatccatccagcagttccaggatcacagta
gagaaagatggaaccctcctcatcagccagacgtggtcaggtgacattggagattatacc
tgtgaggtcatttcttcaggaggaaacgactccagaatggctcgcctagaagtgattgag
ctgcctcattcccctcagaatcttctggccactctgaattcctcccacagccggagcgtg
atgctctcctgggtgcgccccttcgatgggaacagccccgtgctctactacgtggtcgag
ctctccgagaacaattccccctggaaggttcacctctcagaccttgaccccaagatgacc
agtgtcactgtgagtggactcaccccagccaggacctaccagttcagggtgtgtgcagtc
aaccaggtgggaaagggccagtacagcactgagaccagcaggttgatgttaccagaggag
cctcccagtgccccaccaaaaaacatagtggccagtgggcgaaccaatcagtctatcatg
gtccagtggcagcctcctcctgagagtgagcataatggagttcttcatggctacatccta
aggtatcgcctggccggcctccctggagaataccagtataagaacatcaccagtgcagaa
atcaactactgcttagtgaaagacctgatcatttggacccagtatgaaatccaggtggca
tcttacaatggagctgggctgggagccttcagcagacccgtgacagagtacactttacag
ggagtgcccacggctccaccacagaacgtgcaagtcgaagccgtgaactccacaaccatc
cagttcctctggaaccctccgccccagcagttcatcaacggcatcaaccaaggatacaag
cttctggcctggccggtggacgctccagagagcgtgactgtggtcaccatcgctccggat
ttccatggagttcacagtggctgcatcaccaacctgaagaaatacaccacttactacgcc
tcagttctgtgcttcaccacgccaggggacggccctcggagcacaccccagctcctgcgc
accctggaggacaagccaggagcagtggggcacctgagtttcaccgagatcctggacacc
tcgctcaaggtcagctggcaagagcctgtggagaaaaacggcatcatcacagggtaccag
atctcctgggaggtgtatggcaggaatgagtctcgcctggcccgcacactgtccaacaca
accctggagtacaagatcacggggctctcgtccctcaccacctacaccatcgaggtggca
gctgtgactgccaaagggagcgggtgggtcacgtcctccaccatctcctctggcgtgccc
ccagaacttccaggtgctccatccaacctggtgatttccaacatcagccctcgctctgcc
acgcttcagttccgtccaggatacgacggcaaaacctccatctccaagtggatagttgaa
ggccaggttggtgtgctgggtgatgaggaggaatgggtgagtcttcatgaggtggagaat
gaacctgatgctcagatgctggaggtaccaaaccttactccttacactcattacaggttc
cggatgaggcaggtgaacgtggtgggtgccagccccctgagccagccctccagggtcatc
cagacgctgcaggcccctccggatgtgtcccccgggagcgtcaccgtgcgcacggccagc
gagaccagcctgtggctgcgatgggtgcccctccctgacacgcagtacaacggcaatccg
gagtcagtggggtacaggatcaggttctggcgtgtggacctgcagtcccctgtcctgacg
aaggtcgttaatgacagactggagagagagtacacggtggaagacctggaggagtggaca
gagtatgagctgcagatccaggccttcaacgccatcggggcagggccgtggagcgaagtc
gtgaggggccgtacccgagagtctgttccctctgctcctcctgagaatgtcactgctgaa
gctgtgagttccacccagatcctgctgacatgggctgcagtccctgagtctgagcagaat
ggtctcatcctggggtacaagatccttttcaaagcgaaagatttcgactctgaagcaaag
agccagacggtgagagggaaccacacccagtctgtcctgctctcgggcctgcggaaatac
gtcctgtacgagatccaggtgctggcgttcactcggatcggagatggagtccccagctct
cctgcagtgatagagagaaccaaggacgatgcccctggcccccccgtgaggctggtgttc
cccgaggtgaggctgacatctgtacggattgtttggcagccaccggaggagcccaatgga
attatcctggggtaccaggtcgcctatcgcctggccagcagcagccccaacaagttcacc
acggtggaggtcggctcgacggtgcggcagttcacggccacagacctcaccccggagtca
gcctacatcttcaggacgtccgccaagaccaggcagggctggggggagcccctggaagcc
acggtgatcaccacagagaaacgagaacgaccagcacctcccaggcaggtgatgaccccc
cagagcgacgtgtcctcccggagtctgctgctgaagtgggtccctggaagtgatggatct
tccccgatccgatacttcacagtccaagtgcgagaactgcccaatggagactggcaaacc
tactcctcttccatcagccacgaggcgacgtcctgcgttatcgaaagcttgaaccccttc
acctcttacaaactgcgagtgaaggcaaccaacgatatcggggacagcgacttcagtgcg
gagacagaggcggtcacgactctgcaggatgttccagatgaaccacccagttctgtgtta
gtgactccccacacgacttcctctgtccttgtgcagtggcagccgcccaaagtggagagt
ctgaatggtttgctgttgggataccggatctactaccgggagctggattatgacgctgga
cctggaacagaatccaaaaacatccagaacccttcagctctaagggcagagctcacaccc
caaagcagcttcaagacagtgaacagcagctctgcattaacgacgtatgaattaacacag
ttgaaaaaatacaagagatatgaagtactaatgacagcatacaatgtcattggtgagagc
cctaccagcacaccggtggaagtgtttgtgggtgaagcagcaccggcgctggccccacag
aacatccaagtaaactccctctctgcaagccagctggagctcacctgggacccccctcct
gccgacagccaaaatgggaacatccaaggctacaagatttattactgggagagcgacacc
cagaacgacacggagaaggtgaaggtccttttcctcccggagacaacggtgcggctgaag
aacctgacgagccacacgcggtacatggtctgcatctccgccttcaacgccgccggggat
ggcccccgcagcagcccctcgcagggcaggacgcaccaggcggcacccagtgctcccagc
ttcttggcgttctctgaaatcacttgcactacactcaatgtgtcttggggcgagccgaca
gcagcaaatggagtcctgcagggttatcgagtagtctatgagcctctggctcccgtccag
ggggtgagcaaggtggtgactgtggacattaaagggaactggcagcgctggttgaaggtc
cgtgatctcaccaagggcatgacctatttattccgagtgcaagcccgaaccattgcctat
ggacctgaactgcaagccaacatcacagctgggccagcagaagggtctcctggctcccct
caggaaattctggtgacaaaatcttcttctgggctgacgctgcgatggactgagggagat
tcaggagaaaaacccacaactggttacattatagaggcacgaccctcagatgaaggactc
tgggatatgtttgtgaaggacatccctcgcagcgccacctcctacacagtcggcctggac
aagctcagacagggggtcacctatgaatttcgggtggtggctgtcaacgaatttggctat
ggagagccaagtgttccgtctgtggcagtatcagcacaaacagaagcccctttctacgag
gagtggtggtttctgctggtgatggctctctccagcttgatcctcatcctcctggtggtg
tttgcattggtcctgcatggccagagcaagaagtacaagaactgcaacggaggtaaaacc
atctccaatgtggaagagtcggtcaccctggataacggaggcttcactgctctggagctc
aacagcagacacctgaacatcaagagcaccttctcaaagaaaaatggaaccaggtctcct
cctcgcccaagcccaggggggctgcactactctgatgaggacatctgcaacaagtacaat
ggagctgtgctgaccgagggcttgggcctcaacgagaagcccttggaagtgtcggagtca
gaggtcacggactcagactacgaggacgagctgccaaagcactccttcgtgaaccactac
atgagcgaccccacctactacaactcgtggaagcggcagcagaaaggggtgaagcacccg
gcgtcctacagatacgaggagtgcaccgccagcgagacagaaccctatttccagactgtc
atcacgacacagagctcaggaggggtgtacacccccacgggacagcccgcgcccggctcc
cggactccagtgacagggttctcctccttcgtctga

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