Empidonax traillii (willow flycatcher): 114060224
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Entry
114060224 CDS
T05887
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
114060224 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etl01009
]
114060224 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etl04515
]
114060224 (PCDH9)
Protein phosphatases and associated proteins [BR:
etl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114060224 (PCDH9)
Cell adhesion molecules [BR:
etl04515
]
Cadherins
Protocadherins
114060224 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
Cadherin_4
DUF6377
Motif
Other DBs
NCBI-GeneID:
114060224
NCBI-ProteinID:
XP_027745355
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSALAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQVNEHFYWS
ISTAYKCPINQY
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattct
gctctagctcaagaacttatttacactattagagaggagctgcctgaaaacgtacccata
gggaacataccaaaggacctgaacatttctcatatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtgtctaaagcgggggatgcacctctggtcaaagtgtccagt
aacacgggggagatctttacaacatctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaatgagtgtttctttgaacttgaagtggtgattctccctaat
gacttttttaggctgattaaaataaaaatcattgtaaaggatactaatgacaatgcacct
atgtttccatcccccgtcataaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaacggtgtgcagcactatgag
ttgttaaatgggcagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgattgtgcagcagaacttggacagagaacaaaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagctatcctgcaagtc
acagtaagtgatgtgaatgataacaggccagtgtttaaagaaagtcaagtagaggtccat
ataccagagaatgcccctgtaggcacctctgtaattcagcttcacgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggagcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccctagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccagcc
cgagcaactgtcaccatcaatgtcactgatgtaaacgataaccctcctaacatagacctc
aggtacataataagtcccatcaacggcacagtgtacttatctgagaaagatcccatcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcatagagagagaggttcccttccacctgaaagcagtttacgacaaccagtacttg
ttagagacctcttctttgttggactatgagggcaccaaagaattcagctttaaaattgtg
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaagctggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggtcctaatgcctccttttttgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggagcgtttcattttc
actgttacagcccgagacaacggcacccctcctttgcagagtcaagcagctgtaattgtt
actgtgttggacgaaaatgacaacagtcccaaatttactcataatcatttccagtttttc
gtatcagagaacttgccaaagtatagcacagtgggggtgatcacagtgactgatgcggat
gctggggaaaataaagcagtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccgtactccggagttataaagtccaatgtttcctttgatcgagaacagcagagctct
tacacctttgatgttaaagcagtggatggagggcaacctcctcgctcttctacagcaaaa
gtaaccataaatgtgatggatgttaatgataatagccccgttgtcatctacccaccttct
aatacttcttttaagctagtgccactctcagcgattccaggatcggtggtagccgaagtc
ttcgctgtggatatagacactggcatgaacgctgagctgaagtacacaattgtaagcggc
aataacaagggtttgtttcggattgatccagtgacaggtaatatcactctggaagaaaaa
ccaactcctaatgatgtggggctgcatcgcctagttgtcaacataagtgatttgggttat
cccaaatccctgcatactcttgtgcttgtatttctctatgtaaatgatactgctggaaat
gcctcttatatttatgacttgatacgcaggactatggaaacacctctggatcggaacata
ggggacagcagccaaccctaccaaaacgaggactatctcacgatcatgattgctattgtg
gcaggtgccatggttgtcatagtggtgatatttgtcacagttcttgttcgctgtcgacat
gcatccagattcaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccaaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgactgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccgcagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccatgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacaggtaaacgagcacttttactggtct
ataagtactgcatacaagtgcccgatcaaccagtattaa
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integrated database retrieval system
