Empidonax traillii (willow flycatcher): 114060387
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Entry
114060387 CDS
T05887
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114060387 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114060387 (VPS35)
Membrane trafficking [BR:
etl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
114060387 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
114060387
NCBI-ProteinID:
XP_027745663
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MVRPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSML
SPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVY
VKSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISD
SMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERY
KQIVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNI
IIALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKL
KHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAED
PDPEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQ
LAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLR
LRRESPESEGPIYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccaacaacacagcaatctcctcaggatgaacaggaaaaactcctggatgaa
gccattcaggctgtgaaggtgcagtctttccagatgaagagatgcttggacaaaaacaag
ctcatggatgctctgaaacatgcttccaacatgcttggtgagctgcggacttccatgtta
tctccaaagagctattatgagctctacatggcaatttctgatgagctgcactacttggaa
gtctacctgacagatgaatttgccaaaggaaggaaggtggcagacctttacgagctagta
cagtacgcaggaaatatcattccaagactgtatctcctgataacagtaggtgttgtctat
gtcaagtcatttccacagtccaggaaagatattttgaaagacctggtggagatgtgccgt
ggagtgcagcatcctcttagaggcctcttccttaggaactatctcctgcagtgtaccagg
aatatcttaccagatgaaggcgagcaagcagatgaagaaaccactggagacatcagtgat
tcgatggactttgtgctgctgaactttgctgagatgaacaaactctgggtgcggatgcag
caccagggccacagtcgggacagggagaaaagggagcgcgaaaggcaggaactgagaatc
ctggtgggaacaaacctggttcgcctcagccagctggaaggtgtcaatgtggagcgatat
aagcagattgttctgccaggaatactggagcaggttgtgaactgcagagatgctttagct
caggagtacctcatggagtgcatcatacaggttttcccagatgaatttcacctccaaacc
ctgaacccatttctcagagcctgtgctgagctgcaccaaaatgtgaatgtgaaaaatata
attattgctttaattgacaggttagctttatttgcacatcgtgaagatggacctggtatc
ccagcagatatcaaactctttgacatcttttcacagcaggttgctactgttatacagtct
cgacaggacatgccctcagaggatgtggtgtctttgcaagtttctctcattaatttggct
atgaaatgctacccagaccgtgttgactatgttgacaaggtgttggagacaactgtggaa
atattcaataaacttaatctggaacatattgcaacaagcagtgctgtttctaaggagctg
accagacttttgaagattcctgttgatacttacaacaatatcctgacagttctgaaacta
aaacattttcacccactctttgaatactttgattatgagtccaggaagagcatgagttgt
tacgtgcttagcaacgtattggactataacacagaaattgtgtcccaagagcaggttgat
gctatcatgaatttggtatccacgctgatccaggaccaaccagatcagcctgctgaagat
cctgaccccgaggactttgctgatgagcagagccttgtgggaagatttattcaccttctg
cgctccgatgaccctgaccagcagtacctgatcctgaacactgcccggaagcactttggt
gctggtgggaaccagcgcattcgtttcacgctgcccccgttggtttttgctgcataccag
cttgcttttcgctacaaagagaactccaaagtggatgacaaatgggaaaagaagtgccag
aagatcttctcgtttgctcatcagaccatcagtgctctgatcaaagcagagctggcagag
ctgcccctccgtctcttcctgcagggagccctggctgcaggagagattggctttgagaat
cacgaaactgtggcctatgaattcatgtcccaggccttctctctatatgaagatgaaatc
agtgactcaaaagcacagctggctgcaatcaccttgataattgggacatttgagaggatg
aagtgcttcagtgaggagaaccacgagcctttgaggactcagtgtgcactggcagcctct
aaactcctgaagaagccagaccagtgccgggctgtgagcacttgtgcccatctgttttgg
tctggccgaaatactgacaagaatggagaggagcttcatggaggaaaaagagtgatggaa
tgcctaaagaaggctctgaagatagcaaatcagtgcatggacccttctctgcaagtccag
ctcttcatagaaattctgaatagatatatctatttttatgaaaaggaaaatgaggcggtg
acaattcaggttttgaatcagcttatacagaagatcagagaagatctcccaaaccttgag
tctactgaagaaacagaacaaattaacaaacactttcacaacacactggagcacttgcgt
ctgaggagggaatcaccagaatctgaggggccaatttatgaaggtcttgttctttag
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