Empidonax traillii (willow flycatcher): 114060483
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Entry
114060483 CDS
T05887
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03030
DNA replication
etl03420
Nucleotide excision repair
etl03430
Mismatch repair
etl03440
Homologous recombination
etl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114060483 (RPA1)
03420 Nucleotide excision repair
114060483 (RPA1)
03430 Mismatch repair
114060483 (RPA1)
03440 Homologous recombination
114060483 (RPA1)
03460 Fanconi anemia pathway
114060483 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114060483 (RPA1)
03032 DNA replication proteins [BR:
etl03032
]
114060483 (RPA1)
03400 DNA repair and recombination proteins [BR:
etl03400
]
114060483 (RPA1)
Transcription factors [BR:
etl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114060483 (RPA1)
DNA replication proteins [BR:
etl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
114060483 (RPA1)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
114060483 (RPA1)
MMR (mismatch excision repair)
114060483 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
114060483 (RPA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
CATSPERD-E_C
RTL1-8_LDOC
RADX_3rd
Motif
Other DBs
NCBI-GeneID:
114060483
NCBI-ProteinID:
XP_027745819
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSVRLSEGAIAAIMQGENVSKPVLQVVNTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQ
LNPLVEDERLSARCVCQVNRFIVNSLKDGRRVVILMDVNVLQTANEVGGLIGNPQPYNEG
QGQQRPAAPTPNPAPSKPQQQNGSLSVAGPAAPKYHAPSNQFGKASAPSAVKTPGGSQAK
VVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQAD
KFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFV
SISDLENTPKDSIVDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGN
EAEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLE
CASISDVRGGPAAGANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENCMYQACPS
QDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQESAEFILGQS
AAFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATALDVKPVNYREYS
KRLIANIRRNAQLG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgagggggccatcgcggccataatgcagggggagaacgtctcc
aagcccgtgctgcaagtcgtcaatacaagagctattgctacaggaactgggcccccacgt
tacagggtgctgatgagtgatggggttaacacactgtcctccttcatgctggcaacacag
ctgaaccccctggtggaagacgagcgcttgtcagcccggtgtgtttgccaggttaacaga
ttcatcgtcaacagcctgaaagatggaaggagagtggttatactgatggatgtaaatgtt
ctgcaaactgccaatgaggttggtgggcttattggcaatccacagccgtacaatgaaggg
caagggcagcagagacctgcagctccaaccccaaacccagcacccagcaagccccagcaa
caaaatggcagtttgtcagtagcaggtcctgctgctcccaagtaccacgctccctccaac
cagtttggaaaagcaagtgctcccagtgcagtgaagacaccaggagggtcccaggccaaa
gtggtgccaattgccagcttgaatccataccagtccaagtggaccatttgtgctcgtgtt
acccaaaagggccagatccgcacgtggagcaactcccgtggtgaaggaaagctcttttcc
atagagctggttgatgaaagcggcgagattagagctactgcattcaacgatcaagcagac
aagttctttccactcattgaattgaacaaggtgtattattttaccaaaggcaatttgaag
actgctaacaagcaatatacagctgttaagaatgactatgagattacattcactaacgag
acttcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgattttgta
tccatctctgacttggagaacacacccaaagactcgattgttgacgtaattggaatttgt
aagagctatgaagatgtcactaaaattacagtgaaagctaacaatagggaggtttcaaag
aggaacgtgcatctgatggatacatcagggaagctggtgacagctacgctgtggggaaat
gaggctgaacagtttgatggctccagacaacctgtgattgccatcaaaggagccagagtc
tctgattttggtggtagaagcctgtctgtcctgtcctcgagtacagttgtcatcaacccc
gatagcccagaggcttttaaactccgaggatggtttgactctgaggggcagctgctggaa
tgtgcctcgatctctgatgtgaggggtgggccagcagctggagcaaataccaactggaaa
actttgtttgaagccaaatctgagaacttgggacaaggagataaggcagattattttagc
tgtgtgggcacaatcgtacatctgcgcaaggagaactgcatgtaccaggcatgtccctcg
caggactgcaacaagaaagtgatagaccagcaaaatggactctaccgttgcgagaagtgc
gaccgtgagttccccaacttcaagtaccgcatgatgctcctggtgaccattgcagactgt
ctcgagtatcagtgggtgacttgtttccaagagtcggcagaattcattcttgggcaaagt
gcagctttcctgggagaactgaaggaaaagaacgagcaggcgtttgaagaagtgttccaa
aatgcaaacttcaacacgtatgagttcaggatccgagtgaaactggagacttacaatgat
gaatctcgtattaaggccacggcactggacgtcaaacccgtgaactacagggagtacagc
aagaggttgattgccaacatcaggagaaatgctcagctggggtga
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integrated database retrieval system
