Empidonax traillii (willow flycatcher): 114060486
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Entry
114060486 CDS
T05887
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114060486 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114060486 (SCARF1)
Membrane trafficking [BR:
etl04131
]
Endocytosis
Phagocytosis
Scavenger receptors
114060486 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_PEAR1L
EGF_2
Motif
Other DBs
NCBI-GeneID:
114060486
NCBI-ProteinID:
XP_027745823
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MGSARPILCLQLWLWVHSSAQELDPDGRNVCRLPTGLECCPGWKQDGQECTVALCEGEDA
CGEDEVCVKPGLCRCKPGFFGADCSSRCPEQYWGPDCKQSCPCHPNGRCDPVSGHCTCDP
NHWGQLCQFPCQCGPHGRCDPQTGACRCEPGWWAPNCKKQCQCNLASSHCDPLTGLCRCL
LGWWGKRCSFKCSCNLSPCTQETGRCECKAGFWGLACQWRCECVHGSCSPVTGHCTCEPG
YQGRSCQEPCPAGKYGSQCMHSCGNCKRSQPCSPVDGFCLACQPGWNGTLCKDPCAPGFH
GESCLQPCPRCRRGEPCDPQTGSCLHCDPGWTGPSCNNSCPTGTFGDGCQLLCPECVAGS
CDPVTGVCICQAGYWGESCNDTCPEGYFGVNCSEPCQCSRGTCDPVQGHCVLSLKDHGAL
AAAILVPLLLLLLCVACCCCGAGPADARDRAAVPDDDVVARMKHHVQGVLANLSAMMPCF
NLAGSKLPKVTVSHHDTEIPFNPSFIESPSAAWVSDSSFSSFDTDNEGPEYSVPPREGIP
LLGGAELQDGASPPGEVLPDPSAFDSEDVSQPFAIPRTSSIAKAKRPSVSFAEGTKFGAV
ETPSPSRKPKTLWGPSKLTQTPGDVATEPQSERPASDCYENPEPLSKGEESHRPSPRATP
GGRRRVVSSTRHVAQRVEALEAAAKSGSWEAKGKDPNVTTIYMMVGTAGQDPKAEAGGEG
PVQAVLKRLGSLQKGKWAAEEEPKVRRSMEAIQKPPRRALAQRRDSVNSCKQRESVPGAP
AERSPSKHQNLPAKRLSLLLAALSSKSTGAQDGASEAVGATERGKSPELVVSLETKGQAA
MEEEPKYENVTSSGANSPSSPGKELPATPAAT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggggagtgcccggcccatcctctgcctccagctgtggctgtgggtgcacagctctgcc
caggagcttgaccccgatggcaggaacgtctgcaggctccccactggcctggagtgctgc
cctggctggaagcaggacgggcaggagtgcacagttgcactgtgcgagggggaggatgcc
tgtggggaggacgaggtatgtgtgaaacccgggctctgccgctgcaaacccggcttcttc
ggagcagactgcagttcccgctgccccgagcagtactggggccccgactgcaaacagagc
tgcccgtgccaccccaacgggcgctgcgacccggtgagcggccactgcacctgcgacccc
aaccactggggacagctctgccagttcccctgccagtgtggcccccacggccgctgtgac
ccccagacgggcgcctgccgctgcgagccgggctggtgggcgcccaactgcaagaagcag
tgtcagtgcaacctcgccagctcccactgcgaccctctgactgggctctgccgctgcctg
ctgggctggtggggcaagaggtgcagcttcaagtgctcctgcaacctctctccctgcacc
caggagacgggcaggtgcgagtgcaaggccgggttttgggggctggcgtgccagtggcgc
tgtgagtgcgtgcacggctcctgcagccccgtcaccggccactgcacctgcgagcccggc
taccagggcaggagctgccaggagccctgcccggcggggaaatacggctctcagtgcatg
cacagctgtgggaactgcaagcgcagccagccctgctcgcccgtggatggcttctgcctg
gcctgccagcccggctggaacgggactctctgcaaggatccctgcgctcccggcttccac
ggcgagagctgcctccagccgtgcccccgctgccggcgtggggagccctgtgacccccag
actgggtcctgcctgcactgtgatcccggctggacaggacccagctgcaacaactcctgc
cccacaggcacctttggcgatgggtgccagctcctctgccccgagtgtgttgcggggagc
tgtgaccccgtgacaggagtttgcatctgccaggcaggctactggggagagagctgcaac
gacacctgtccagaggggtattttggagtgaattgttccgagccctgccagtgctcccgg
gggacctgcgaccctgtgcagggtcactgtgtgctgagtttgaaggaccacggagccctt
gcagctgccatccttgtccctctcctgctgctgctgctctgtgttgcctgctgttgctgt
ggagccggcccagcagatgctagagacagggcggccgtgccggacgacgatgtggtggcc
aggatgaagcaccacgtgcagggggtgctggcgaacctcagtgctatgatgccctgcttc
aacctggctggttccaaactccccaaagtcacagtttcccaccacgacacggaaatcccc
ttcaaccccagcttcatcgagtcgccctcagctgcgtgggtttcagacagctccttctcc
tcctttgacaccgacaacgagggacccgagtactctgtccctcccagagaagggatcccg
ctgctggggggggctgagctgcaggatggggcatctccccctggtgaggtgctcccagac
ccatctgcctttgactccgaggatgtgtcccagcccttcgccatccctcgcacctccagc
atcgccaaggccaagcgaccctccgtgtcctttgccgaggggacaaaatttggggcagtg
gagacgcccagccccagtcggaagcccaagaccctgtggggcccatccaagctgacccaa
acaccaggggatgtggcaactgaaccccagagcgagcgaccagccagcgattgctacgag
aaccctgagcccctcagcaagggggaggaaagccaccggccatcgccacgggccaccccg
gggggacgcaggagggtggtctccagcaccaggcacgtggcccagagagtggaggcactg
gaagcagctgcaaaatctggcagctgggaggcgaaggggaaagaccccaatgtcaccacc
atctacatgatggtgggaacggctgggcaggaccccaaggcagaagcaggcggcgaggga
ccggtccaggctgtgctgaagcgtctgggcagcttgcagaagggcaagtgggctgccgag
gaggagcccaaggtgaggaggagcatggaggccatccagaaacctccccgccgggccctg
gcacagcgcagagactctgtgaacagctgcaagcagagggagagtgtcccaggggctcct
gccgagcgatcccccagcaagcaccagaatctccctgcgaagagactgtccctccttctt
gcagctctctcatcaaaaagcaccggagcccaggacggggccagcgaagctgtgggtgcc
actgagaggggcaaaagccctgagttagttgtcagcctcgaaacaaagggccaggccgcc
atggaggaagaacccaaatacgagaatgtgaccagcagtggtgccaattcaccctccagc
cctggcaaggagctgccggccacccctgcagccacctga
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