Empidonax traillii (willow flycatcher): 114060826
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Entry
114060826 CDS
T05887
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03030
DNA replication
etl03410
Base excision repair
etl03420
Nucleotide excision repair
etl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114060826 (RFC4)
03410 Base excision repair
114060826 (RFC4)
03420 Nucleotide excision repair
114060826 (RFC4)
03430 Mismatch repair
114060826 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
etl03032
]
114060826 (RFC4)
03036 Chromosome and associated proteins [BR:
etl03036
]
114060826 (RFC4)
03400 DNA repair and recombination proteins [BR:
etl03400
]
114060826 (RFC4)
DNA replication proteins [BR:
etl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114060826 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
114060826 (RFC4)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114060826 (RFC4)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114060826 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
114060826 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
AAA_30
AAA_22
AAA_11
AAA_16
AAA_24
SLFN-g3_helicase
Mg_chelatase
AAA_14
AAA_19
AAA_28
AAA_5
TIP49_C
AAA_2
AAA_23
DNAX_ATPase_lid
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
114060826
NCBI-ProteinID:
XP_027746440
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
VLRFSVGFAGFCLFYLFAFLKNGAWLFQLPNLLFYGPPGTGKTSTILAAARELFGPELFR
QRVLELNASDERGIQVIREKVKAFAQLTASGSRSDGKMCPPFKIVILDEADSMTSAAQAA
LRRTMEKESKTTRFCLICNYISRIIEPLTSRCSKFRFKPLSDSVQQQRLLEVSEKEHVKI
SNEAVSYLVKVSEGDLRKAITFLQSATRLMGGKEITEKIVTEIAGVIPKETIDELLLGCQ
SGSFEKLETLAKNLINEGFAVAQLVNQLHDTVVESEDLSDKQKSVIVEKLAEVDKCLADG
ADEFLQLMSLCALVMQQLTQNT
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgctcagattttcagtaggttttgctgggttttgtttgttttacttatttgcttttcta
aaaaatggtgcctggctgtttcagcttcccaatctgttgttctatggcccacctggaact
ggaaagacttccacgattttagcagctgccagagaactgtttgggcctgaattattccgg
caaagagtccttgagttaaatgcttctgatgagcgtggaattcaagtgattcgggagaaa
gtgaaagcttttgctcagctcactgcatctggaagccgttcagatggtaaaatgtgtcct
ccttttaaaattgtgatcctggatgaagcagactcgatgacttcagcagcacaggcagct
ttaagacgcaccatggaaaaggaatcgaaaacaacacgtttctgccttatttgtaactac
atcagcagaataattgaacctttaacatctcgatgctccaaattccgcttcaagcctctg
tcggacagtgtccaacagcagcggctgctggaggtttctgagaaggagcacgtgaaaatc
agtaatgaggcagtgtcgtaccttgtgaaagtgtcagaaggggatttaagaaaagcaatt
actttccttcaaagtgccactcgcctaatgggtgggaaggagatcacagagaagatagtc
actgaaattgctggggtcatccctaaagagacaattgatgaactgctgttggggtgccag
agtggttcctttgagaaactggaaacactggcaaagaatctcatcaatgaggggtttgct
gttgctcagcttgtaaaccagctgcacgacacggtggtggagagtgaagatctcagtgac
aagcagaaatctgtcatagtggaaaaacttgcggaagtggacaaatgcctggcagatggt
gctgatgaattcttgcagctgatgagtctctgtgcccttgtgatgcagcagctcacacag
aacacctga
DBGET
integrated database retrieval system
