Empidonax traillii (willow flycatcher): 114060969
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Entry
114060969 CDS
T05887
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114060969 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114060969 (EXOSC8)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114060969 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114060969
NCBI-ProteinID:
XP_027746685
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MAAAFKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSITTADGSALVKLGNTTVIC
GVKAELAAPAADSANKGYIVPNVELPSLCSERFRSGPPGEEAQAASQFIADVIENSQMIV
KEDLCITNGKLAWVLYCDIICLDYDGNLLDASVFALLAALKNVQLPSVIINEETGLSEVN
LKQKTPLTVRKHPVATSFAIFDDTLLIVDPTAEEEDLAAGTVTVVTDEEGRLCSVHKPGG
SPLTGAKLQDCITRAITRHKEVKKLIDKVIKSIMPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgttcaaaactgtggaaccattggaatattacagaaggtttttgaaagag
aactgtcgacccgatggaagggagttaggtgaattccgggcaaccactgtcaacataggt
tcaattacaactgcagatggttctgccctggtgaagttaggaaataccacggtgatttgt
ggagtgaaagcggaacttgctgcacctgcagcagattctgctaataaggggtatatcgta
ccaaatgtagaactgccatccctctgttcagagaggtttcgctctggaccacctggtgaa
gaggctcaagcagcgagccagttcattgcagatgtgattgaaaattcacagatgatcgtg
aaagaagatctgtgtattacaaatggcaagcttgcttgggtgttatactgtgatatcata
tgtctggactatgatggaaaccttttggatgccagtgtctttgctttgttagcagcctta
aaaaatgtacaattgccatcagttattataaatgaagaaactggtttatcagaagtgaat
ttaaaacagaagactcctttgactgtcagaaagcatcctgttgccacatcatttgctata
tttgatgacacattgctcattgttgatccaactgctgaagaggaagatttagcagctgga
acagtaaccgttgtcactgatgaagaagggagactatgttctgttcataaaccaggtgga
agtcctcttacaggagccaagcttcaggactgtatcaccagagcaattacaagacacaaa
gaagtaaagaagctgattgacaaagtaataaaaagtataatgcccaagtga
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