Empidonax traillii (willow flycatcher): 114061027
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Entry
114061027 CDS
T05887
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114061027 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etl04515
]
114061027 (LRRC4C)
Cell adhesion molecules [BR:
etl04515
]
Immunoglobulin superfamily
NGL family
114061027 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRR_LRWD1
Ig_6
Herpes_gE_N
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
114061027
NCBI-ProteinID:
XP_027746811
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTLQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
NWETTNMTTSLTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtactgttggctcttcagcttcttgtggtggctggt
ctagtgagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagtaaagta
atctgtgtgcggaaaaatctgagggacgtgccagacggcatctccaccaacacccggtta
ctcaatctccatgagaaccagatccaaatcattaaagttaatagcttcaagcatctaaga
cacctagaaatcctgcagctcagcaggaatcacatcagaacaattgaaataggggctttc
aatggtctggccaatctcaacaccttggaactctttgacaatcgtctgaccactatccca
aatggggcttttgtatacctgtcaaaattgaaggaactgtggttgagaaacaaccccatt
gagagcatcccttcttatgcttttaacagaatcccttctctccggaggttggatttgggg
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaacttgaga
tatttgaaccttgccatgtgcaatctgcgagagattcctaaccttaccccacttgtaaaa
ctggatgagttagatctttctgggaatcacctgactgccatccggccaggttctttccaa
gggttgatgcatcttcagaaattgtggatgatacagtcccagattcaagtgatagaaagg
aatgcttttgataaccttcagtcacttgtagagatcaacctggcacacaacaatctaaca
ctactgcctcatgacctgttcacgccacttcgcctcgaaaggatccacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggattaaagacaaggcaccc
tccaatactgcatgctgcgcccgttgccacacacctcccagtttaaaaggaaggtacatt
ggtgagctggacctgaattacttcacgtgttatgctccagtcatagtggagccaccagca
gacctcaacgtcacagaaggcatggctgcagaaatgaaatgccgggcatcaacctccctg
acctctgtatcttggattactccaaatggatctgttatgacacatggggcatacagagtt
cggattgctgtgctcagtgatggcacattaaattttacaaaggtaactctgcaagacacg
ggtttgtatacatgcatggtgagtaactctgttgggaataccacagcttctgccacactg
aatgtgaccgccctggataaccctggttacacgtacttttcaactgtcacggtagagact
gtggaaccttctcaggacgaggcacagaccacagagcaggttgggcccacaccagttacc
aactgggaaaccactaacatgacaacctcactcactccacagagcacaagatctacagaa
aaaactttcaccattcctgtgacggacgcaaacaatgggatcccgggaatagatgaggtt
atgaagactaccaaaattataattggttgttttgtggctatcactctcatggctgctgtg
atgctggtaattttctacaaaatgaggaaacagcatcaccggcagaaccatcatgctcca
acacggactgtagagatcattaatgtggatgatgagcttacaggtgacacacctatagag
agtcatttgcccatgccagcaatagagcatgagcacctaaatcactataactcttataaa
tctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcat
gaaccgttattgatccgaatgaactcaaaagacaatgtacaagagactcagatctga
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