Empidonax traillii (willow flycatcher): 114061046
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Entry
114061046 CDS
T05887
Symbol
LRRC7
Name
(RefSeq) leucine-rich repeat-containing protein 7
KO
K24055
leucine-rich repeat-containing protein 7
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
etl04990
]
114061046 (LRRC7)
Domain-containing proteins not elsewhere classified [BR:
etl04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
114061046 (LRRC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_2
LRR_13
PDZ_6
LRR_EndoS
LRR_NXF1-5
LRR_5
LRR_Zer-1
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
114061046
NCBI-ProteinID:
XP_027746860
LinkDB
All DBs
Position
Unknown
AA seq
1509 aa
AA seq
DB search
MDARSRLHLCCLEMTTKRKIIGRLVPCRCFRGEEEIVSVLDYSHCGLQQVPKEVFNFERT
LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDF
PENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE
LRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQVLPGSIG
KLKQLVYLDVSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQ
LTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNV
TVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTFTKLKELAALWLSDNQSKALI
PLQTEAHPETKQRVLTNYMFPQQPRSDEDFQSDSDSFNPTLWEEQRQQRMTVAFEFEDKK
EEEENPGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKPSHGVRPENSVPAANSDQGVK
DTYEHKWPMAPKEISVEVQDKENKEFPKNPLSETENTQESPLETSDREEKTEGTKSSEDA
YGHPASEMRIGELRPSMPETPLYPPKLVLLGKDKKESTDESEADKIHCLNNSVSSGTYSD
YSPSQASSGSSNAHVKMGSLQTTAKEAVNNSLWGNRLAQSFPQPLETKPLLSQRESAPAG
NLPARPERRPLSDTFAEGWTDGSHYDNTGFVAEESTVENPNANPLLTTKSRSSSAHGRRP
LIRQDRIVGIPLELEQPTLRNTHESEVPPPNPWQNWTRTPSPFEDRTAFPSKLESTPTTS
PLPERKDHVKESPEMTSTFPPGIAWEYHDSNANRSLTNVFSHIHCRPDPSKNVISISKST
ERLSPMMRDLKTNKFKKSQSIDEIDIGTYKVYNIPLENYASGNDTVGPHERVDKLLGPEH
GMLSMSRSQSVPMLDDELLTYGSVKVQPQQKSSVTKKVYQFDQSFNPQGAVEVTADKRLL
PPFQLNPEYIPQPPKNLPQELVSPRGYHGYAPVDPMFSFSQPSVSEEPVGPPFGSQGARP
GFLRRADSLASSTEMSMFRRVSEPQELPPGDRYGRAPFRAAADRQSGMAVPEAQFLKRNG
RYEDELPSYQEVKAQTGSFPVKNLTQRRPLSARSYSTESYGTSQTRPVSARPTMAALLEK
IPSDYNLGNYGDKPSDNSDIKPRPPPGKGNESCAKMPADWRQQLLRHIEARRLDRTAAYK
HHTVSLGMLHSGGVSAMHAGRSMTLNLQTKSKFENQMLQELPLPKTPSQQSSILDNGQDE
VSVGSQWNPYPLGRRDVPPDTVTKKAGSHIQTLMGSQSLQHRSREQPYEGSMNKVTIQQY
QPPLPIQIPAAQSSRAPQTGRCLIQTKGQRSTDAYQEQFCVRIEKNPGLGFSISGGISGQ
GNPFKPSDKGIFVTRVQPDGPASSLLQPGDKILQANGHSFVHMEHEKAVLLLKSFQNTVD
LVIQRELTV
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcgctcccgcctgcacctatgctgcttggagatgacaaccaaaaggaagatc
atcggccgcctggtgccgtgccggtgtttccgaggggaggaagagattgtgtccgtgttg
gattactctcactgtggcctgcagcaggtgccaaaggaggttttcaattttgagaggacc
ttggaggagctttatctcgatgccaaccagattgaagagctacccaagcaactgttcaac
tgtcaggctttacggaagctgagcatccctgacaacgacctgtccagcctccccaccacc
atcgccagcctcgtgaacctcagagagcttgacatcagtaaaaatggaattcaagatttt
ccagaaaatatcaagtgttgtaaatgtttaacaattatcgaagccagtgtgaaccctgtg
tccaagctgccagatggcttcacacaacttctaaatctgacccagctctatctaaatgat
gcctttttggagtttcttccagctaactttggaagacttgtcaaattgcgaattttggag
ttaagagaaaaccacttgaaaactctaccaaagtcaatgcacaaactgactcagctggag
agacttgatctgggcaataatgaattctctgagctgcctgaggttcttgaacaaattcag
aatctaaaggaactgtggatggacaataattctttgcaagtgctacctgggtctataggg
aagttaaaacagctcgtgtacctggatgtgtccaaaaacaggatagaaacggtggatttg
gacatctcgggatgtgaagggcttgaggatctcctgttgtcatccaacatgttgcagcag
ctgccagattccatcgggctgttgaagagactgacaactctgaaagtagatgacaaccag
ctcacaattctgcccaatgccattggaaatttatctttgttagaagaatttgactgcagc
tgcaatgagttggagtctctgccctccaccatcgggtacctccacaacctgaggaccttg
gctgtggatgagaatttcctcccggagctgcccagagaaattggaagctgtaaaaatgtt
acagtgatgtctctgcgctccaacaagctggaatttcttcccgatgaaattgggcagatg
cagaagctgagagtgttaaacctgagtgataacagactgaagaatttacccttcactttt
actaaactcaaagaacttgcagctttgtggctttctgacaaccagtccaaggctctcatc
ccactgcagacggaggcacatcctgaaaccaagcagcgagtgctcaccaactacatgttc
ccccagcagccccgcagtgatgaagatttccagtcggacagtgacagttttaaccccacg
ctgtgggaggagcagaggcagcagcgcatgactgtggcctttgagtttgaagacaaaaag
gaagaggaggaaaacccagggaaagttaaagttgaaataaatctaaaacgttaccccact
ccctacccggaggatttaaagaatatggtcaaatcagtccaaaacctggtgggcaaaccc
agccatggagtgcggcccgagaactctgtacccgctgccaacagtgaccaaggggtgaaa
gacacgtatgagcacaaatggcccatggcacccaaggagatctcagtggaggttcaagat
aaagaaaataaagaattcccaaagaatcccctgtctgagacagagaacactcaggaatca
cctctggaaacctcagacagggaggagaaaaccgagggcaccaagagttcagaggatgcc
tatggacatcctgccagtgagatgaggataggggagctccgtccttccatgcctgagact
ccgttgtacccccccaaactcgttctgctgggtaaagacaagaaagagtcgacagatgag
tctgaagcagataagatccattgtctgaataacagcgtttcctcaggcacttactcagac
tattccccttcccaggcttcctcagggtcctccaatgcgcatgttaaaatgggctccttg
cagacaacggctaaagaagcagtgaataactctctgtgggggaacaggctggcacagtcg
ttcccacagcccctggagaccaagccattgctgagccagcgggaatcagctccagctggg
aacctgccggcgcggccggaacggcgcccgctgagcgacacgttcgccgagggctggact
gatgggtcccactacgacaacacggggttcgtggccgaggagagcacggtggagaacccc
aacgccaaccccctgctcaccaccaaatcgaggagctcatctgcacacgggcgcaggccg
ctgatccgacaggacaggatagttggcatccccttggagctggagcagccgacgctcaga
aacacacacgaatctgaagtgcctcctcccaatccttggcaaaattggaccagaaccccc
agtccctttgaagacaggacagcttttccttccaaactggaaagcacccccaccaccagc
cctttgcctgagaggaaagatcatgtcaaagagtctcctgaaatgacaagtactttccct
ccaggaatagcatgggaatatcacgactcaaacgctaacagaagcctcacaaatgtcttt
tcccatatccactgtcgcccagatccttccaaaaacgtcatttccatcagcaagagcacg
gagcggctttccccaatgatgagggatttaaaaacgaacaagtttaagaagtctcagagt
attgatgagatagatattggtacatacaaggtgtacaacatccccctagaaaactatgca
tccgggaatgatactgtagggcctcacgagagggtggacaagctgctgggcccagagcac
ggcatgctgagcatgtcccgcagccagtccgtgcccatgctggacgacgagctgctgacc
tacggcagtgtcaaggtgcagccgcagcagaaatcgtccgtcaccaagaaagtctaccag
ttcgaccaaagcttcaacccccagggtgccgtggaggtcacggccgacaagaggctcctg
ccgcccttccaactcaaccccgagtacatcccccaaccacccaaaaacctgccccaggag
ctggtgagcccgcgggggtaccacgggtatgcgcccgtggatcccatgttctccttctca
cagccctcggtgagcgaggagcccgtggggccccccttcggcagccagggcgcacggccg
ggcttcctgcgcagagcggattccctggccagctccaccgagatgtccatgttccgcagg
gtcagtgagccccaggagctgcccccgggcgacaggtacggccgggccccgttccgcgcg
gcagccgatcgccagagcggcatggccgtgcccgaggcacagttcctcaagcgcaacggg
cgctacgaagacgagctcccttcctaccaggaggtgaaagcccagactgggagcttccca
gttaaaaacctcacgcaaaggaggcccttgtctgcacgaagttacagtacagagagctac
ggcacatcccaaacccggcccgtctcagcgaggccgacaatggcagcgctgctggaaaag
attccatcagactataacttgggtaactatggcgacaagccttccgataacagtgatata
aagccaaggcctccccctgggaagggaaatgagagctgtgctaaaatgcctgctgactgg
agacaacagctacttagacatatagaagctagaaggttagacaggaccgctgcttacaaa
caccacacagttagccttggcatgctgcactctggaggggtttcagcaatgcatgccggc
cgaagcatgactttaaacttgcagactaaatctaaatttgaaaaccaaatgcttcaagag
ctacctctaccgaaaaccccgtcgcagcagagcagcatcctggacaacgggcaggacgag
gtgtccgtgggcagccagtggaacccgtacccgctggggcggcgggatgttccccccgac
accgtcaccaagaaggcaggtagccacatccagaccctcatgggatcccagagcctgcag
caccggagccgggagcagccctacgaggggagcatgaacaaggtcaccatccagcagtac
cagccgccgctgcccatccagatcccagcggcccagagctcccgagccccccagaccggg
cggtgcctcatccagaccaagggccagcggagcaccgatgcctaccaggagcagttttgt
gtgaggatagagaagaatcctggcctggggtttagtatcagtggtggaataagtggacaa
ggaaatccattcaaaccttctgataagggtatctttgttactagggttcagcctgacggc
cccgcatccagcctgctccagcccggggacaagatcctgcaggccaatggacacagcttt
gtacatatggaacacgagaaggctgtgcttctactgaagagtttccagaacacagtagac
cttgttattcaacgtgagcttactgtctaa
DBGET
integrated database retrieval system
