Empidonax traillii (willow flycatcher): 114061232
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Entry
114061232 CDS
T05887
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
114061232 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
etl02000
]
114061232 (SLC6A4)
Transporters [BR:
etl02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
114061232 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
DUF3439
Motif
Other DBs
NCBI-GeneID:
114061232
NCBI-ProteinID:
XP_027747276
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All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEKKATSNETEPLTSKKDASDCNKGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGEKGE
AAQISNGYSAVQSSAPCNGMGEGEDAQGTAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLISSFTAELPWTSC
TNPWNTGNCTNYFSKDNVSWALHSTSPAEEFYTRQVLQVHRSEGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCLTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWGKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVSWFYGITQFCNDVKEMLGSAPGWYWRVCWVAISPLFLLFVTCSFLSNP
PELRLFEYDYPYWTTVVGYCIGTSSIIFIPIYMVYRLIVTPGTLKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacaagcaatgagactgagccactgacttccaagaaagatgcctca
gactgtaacaaaggagaagactgtaaagagaacggactcctggtcaggaaccctaaatct
gccctccggctggtggaggatggcaataaagtccatcccagccagggggagaaaggggag
gccgctcagatctccaatggttattcagcagttcagagctcagccccctgcaatgggatg
ggagagggggaggatgcccagggcacggccccggcagccaccaccaccaccaccaccacc
acgtccaccacctgcggggccgaggggcagcagcagctgatggagctggaagacagagag
acctggagtaaaaaaattgactttctcctctctgtcattggatacgcagtggatctggga
aatgtgtggaggtttccttatatatgctaccaaaatggaggaggagccttcctcattcct
tacaccatcatggccatcttcggagggattcccctcttctacatggaattagctctagga
cagtaccacaggaatgggtgtatttccatttggagaaaaatatgtcctatattcaaagga
atcggctttgccatctgtataatagatctttacgtggcctcctactacaacaccatcatg
gcttgggccttttactacctcatctcctccttcacggcggagctgccgtggaccagctgc
acaaacccctggaacacgggcaactgcaccaactacttcagcaaggacaacgtcagctgg
gccctgcactccacctctcctgcagaggaattttatacccgccaagttctacaggtgcac
aggtctgaggggctggatgacctggggggcatcagctggcaactgaccctctgcttgttg
ttaatcttcaccatcgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtttgggtgacagccacgttcccttacatcatcctcttcatcctgctggtgagaggtgca
accctgcctggggcttggagaggtgtcctctactacttgaaacctgactggcagaaactc
ctggccactgaggtttgggtggatgcagcagctcagatttttttctccctgggaccaggt
tttggggtcctgttggcttatgccagctacaacaaattccacaacaactgctaccaagat
gctctggttaccagcaccgtgaactgcctgaccagttttgtgtctggatttgtcatcttc
accgtgctgggatacatggccgagatgaggaacgaagatgtgtcagaggttgccaaagac
actggccccagcctgctcttcatcacatacgccgaggccattgccaacatgccggcttcc
accttctttgccatcatcttcttcctgatgctgctcacgctgggattggacagcacgttt
gcaggactagagggagtgattaccggagtcctggatgaattcccgcacgtctggggcaaa
cgcagggaattgttcgtccttgggctgaccattgtttgcttcctgggctcactggcgacc
ctgacatttgggggagcatacgtggtgaagctgtttgaggaatacgccaccggtccagct
gtcctgaccgtcgtgttcctggaggcagtcgctgtgtcctggttctatggcatcacccag
ttctgcaacgacgtgaaggaaatgctgggctctgccccaggctggtactggcgagtttgc
tgggtggcaattagtcccctcttccttctgttcgtcacgtgcagctttctgtccaaccct
cctgagctgaggctttttgaatacgattatccctactggaccacagtggtgggttattgc
ataggaacctcctccatcatcttcatccccatctacatggtctatcggttgatcgtcact
ccgggaacacttaaggagcgtattctgaaaagcatcactccagaaacagctacagaaatt
ccctttggagacatccgcatgaacgcagtataa
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