Empidonax traillii (willow flycatcher): 114061261
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Entry
114061261 CDS
T05887
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114061261 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etl04040
]
114061261 (TRPV1)
Ion channels [BR:
etl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114061261 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
114061261
NCBI-ProteinID:
XP_027747353
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MSSILGKMKKFGSFDMEESEGADEHAEGEDSVLETSDSSQGPPSTRVQPPKSNIFARRGR
FVMGDSDKNMAPMDSFYQMDHLVAPSVIKFNVNLERGKLHKLLSTDSITGCSEKAFKFYD
RRRIFDAVARGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANIAAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPSGTCWSQ
QDSPLSPSAQNRHEMLLVEPLNRLLQDKWDRFVKHLFYFNFFVYTLHISILTAAAYYRPV
QKDQKPPFAFGHTTGEYFRVTGEILSVLGGLYFFFRGIQYFVQRRPSLKTLIIDGYSEVL
FFVHSLLLLSSVVLYFCGQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILR
DLCRFMFVYLVFLLGFSTAVVTLIEDDNEGQETNTPDSSRCCHVKRGRTSYNSLYYTCLE
LFKFTIGMGDLEFTENYRFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSI
WKLQRAITILDIENSYLNCLRRSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNL
GIINEDPGYSGDLRRNPSFSIKPGRVSGKHWKTLVPLLRDGSRREDAHKLPEEVKLKPVL
EPYYEPEDSEVLKESLPNNHRGGKRSGAANPSGWICKDNQEKYLTEKIGRF
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccatccttgggaagatgaagaaattcggcagctttgacatggaggaatctgaa
ggggcagatgaacatgcagaaggggaggactctgtcctggaaacatctgacagctcccag
ggcccccccagcaccagggtgcagccacccaagagcaacatctttgcgaggcgtgggcgg
tttgtgatgggggacagcgacaagaacatggctcccatggactccttttaccagatggat
cacctggtggcaccttctgtcatcaaatttaatgtcaatttggagagggggaaacttcac
aagctcctgtctacagattccatcacaggctgctcagaaaaagctttcaaattttacgac
cgcagaaggatctttgatgccgtagcccgaggcaacacaaaggacctgagtgacctgctg
ctctaccttaacagaaccttcaagcatctcacagatgaggagttcaaagagcctgaaact
gggaaaacctgtttactgaaagccatgctgaacctgcatgacgggaaaaatgataccatt
cccttgctgctggacattgcaaggaaaactggaactctgaaagagtttgttaatgcagaa
tacactgacaactactacaagggccagactgctcttcacatcgccatcgagagaaggaac
atgtacctggtgaagctcttggtccagaacggagcagatgttcatgcaagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggggagctgcccttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggagaatccctaccag
gcagccaacattgctgctgaggattccatgggcaacatggtcctgcacaccctggtggag
atcgcagataacaccaaggataacaccaagtttgtaaccaagatgtacaataacatattg
atccttggggccaagattaatccaatcctgaagctggaagagctcaccaacaagaaaggg
ctgactccattaaccctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgagagatcaaagatcccgagtgcagacacctgtctaggaagttcactgaatgggca
tatggacctgtccactcctctctttatgacctgtcctgtatagacacatgtgagaaaaat
tcagtgctggagattcttgcctacagcagtgagacaccatctggtacgtgctggtcccag
caagactctcctctttctccttctgctcagaaccggcacgagatgctgctggtggagccc
cttaacaggctcctgcaggacaagtgggaccggtttgtcaagcacttgttttacttcaac
ttctttgtctacaccttgcacatcagcatcctcactgcagctgcttactacagacctgtg
cagaaggaccagaagcctcccttcgcctttggtcacaccactggggagtattttcgagtg
actggagagatcctgagtgttctgggaggcctctatttttttttcagagggatccaatac
ttcgtgcagaggcgcccgtcactcaagacgctgatcattgatggctacagtgaagttctt
ttctttgttcactccttgctcctcctgagctctgtggtgctgtacttctgtggtcaggaa
ctctacgtggcttccatggtgttctccttggccctgggctgggccaacatgctctactac
acccgtggcttccagcagatgggcatttactctgtcatgattgccaagatgatccttaga
gatttgtgtcgcttcatgtttgtctatctggtgttcctcttgggattttctacagctgtg
gtgactttaatcgaagatgacaacgaggggcaagagacgaacacccctgacagttcccgc
tgctgccacgtgaaacgaggccgcacgtcctacaacagcctgtattacacctgcctggag
ctcttcaagttcaccatcggcatgggggacctggagttcacagagaactacaggttcaag
tctgtctttgtcatcctcctggttctctacgtcatcctcacctacatcctcctgctcaac
atgctcatcgcgctgatgggggagaccgtcaacaaaatcgcccaggagagcaagagcatc
tggaaactgcagagagccatcacaatcttggacatcgaaaacagctacttgaactgcttg
aggcgctcgttccgctccgggaagcaagtcctggtggggatcacacctgatggccaggat
gattacagatggtgctttagggttgatgaagtgaactggtccacatggaacacgaatctg
ggcataatcaacgaagaccccggatactccggggacctcaggcggaatcccagtttctct
attaaacctggcagagtttcagggaaacactggaaaacgttggttccgcttttgagggac
ggaagcaggagagaagatgctcacaagttaccagaggaagtcaaattaaaacctgttttg
gaaccttattatgagccagaagattctgaggtgttgaaggagtcacttccaaacaaccac
agggggggaaagagatctggtgctgcaaatccatctggctggatttgcaaagataatcag
gaaaaatatctgacagagaaaataggcagattctaa
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