Empidonax traillii (willow flycatcher): 114061337 Help Entry 114061337         CDS       T05887                                  Symbol ACTN1 Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism etl  Empidonax traillii (willow flycatcher) Pathway etl04510   Focal adhesion etl04517   IgSF CAM signaling etl04518   Integrin signaling etl04519   Cadherin signaling etl04520   Adherens junction etl04530   Tight junction etl04810   Regulation of actin cytoskeleton Brite KEGG Orthology (KO) [BR:etl00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     114061337 (ACTN1)    04518 Integrin signaling     114061337 (ACTN1)    04519 Cadherin signaling     114061337 (ACTN1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     114061337 (ACTN1)    04520 Adherens junction     114061337 (ACTN1)    04530 Tight junction     114061337 (ACTN1)   09142 Cell motility    04810 Regulation of actin cytoskeleton     114061337 (ACTN1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:etl04131]     114061337 (ACTN1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:etl04812]     114061337 (ACTN1)    04147 Exosome [BR:etl04147]     114061337 (ACTN1) Membrane trafficking [BR:etl04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     114061337 (ACTN1) Cytoskeleton proteins [BR:etl04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      114061337 (ACTN1) Exosome [BR:etl04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    114061337 (ACTN1)   Exosomal proteins of colorectal cancer cells    114061337 (ACTN1)   Exosomal proteins of bladder cancer cells    114061337 (ACTN1) SSDB OrthologParalogGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 XisI FAZ1_C Uds1 U3_assoc_6 Motif Other DBs NCBI-GeneID:  114061337 NCBI-ProteinID:  XP_027747515 LinkDB All DBs Position Unknown AA seq 892 aa AA seqDB search MDHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM VSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQK DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPHEI NGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY DIGNDAQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK NYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL NT seq 2679 nt NT seq  +upstreamnt  +downstreamnt atggatcactacgacccgcagcagaccaatgactacatgcagccggaggaggactgggac cgggacctgctcctcgacccagcctgggagaagcagcagaggaagacatttacagcatgg tgtaattctcatctccgcaaggctgggacacagattgagaatatagaggaagatttcagg gatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtttggctaagcct gaaagaggcaaaatgcgagtgcacaaaatatccaacgtgaacaaggccttggatttcatt gccagcaaaggagtcaaattagtatctattggagcagaagaaattgtggatggcaatgtt aaaatgacccttggaatgatctggaccatcatccttcgttttgccattcaggatatctca gttgaagaaacatctgctaaagaaggacttttgttatggtgtcagaggaagacagccccc tacaaaaatgtaaacatccagaacttccatatcagttggaaggatggccttggtttctgt gctttaattcatagacatcgtccagagctcatcgactatgggaagctacgaaaggatgat cctctcactaatctaaacacagcttttgatgtggctgagaaatatctagatattccgaag atgctggacgcggaagacattgttggaactgcccgtcctgatgagaaagccatcatgacc tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagcaaat agaatctgcaaggtgctggcagtcaaccaagaaaatgaacagctcatggaagactacgaa aaactggccagtgatctgctggagtggattcgtcgcaccatcccctggctggagaaccgg gccccagagaacaccatgcaagccatgcagcagaagctggaggacttcagggactaccgc cgcctgcacaaaccccccaaggtccaagagaagtgccaacttgagatcaatttcaacacc ttgcagaccaagctgcgactcagcaacaggccagccttcatgccttcagaagggaaaatg gtctcggatataaacaatgcctggggtggcctagagcaggctgagaagggctacgaggag tggttattgaacgagatccggaggctagagaggctggatcacctggcagagaagttccgg cagaaggcatccattcatgagtcctggacagatggtaaggaagcaatgctgcagcaaaag gattatgaaactgcaaccctctcggagataaaggccctgctgaagaaacacgaggcgttt gagagtgacctggctgcacaccaggaccgcgtggaacagattgctgcaattgcacaagag ctgaatgagctggactattatgactctcccagcgtcaatgccaggtgccagaagatctgt gatcagtgggataatctgggtgccctaacccagaaacgtagagaagccttggagaggaca gagaagttactggaaacaattgaccagttgtacctggaatatgccaaacgagctgcccct ttcaataactggatggagggggccatggaggacctgcaggacacattcattgttcacacc attgaggagatccagggcttgaccacagctcatgagcagttcaaagccacgttgccagat gccgacaaggagcgacaggccattctgggaatccacaatgaagtctcaaagattgtccag acataccatgtcaacatggcaggaacgaatccttacactaccatcaccccacatgaaatc aacggcaaatgggaacatgtgcggcaactggttcccagaagggatcaggccctgatggaa gaacatgctcgccaacagcaaaatgaacgacttcgtaaacagtttggtgcacaggccaat gtcattggaccctggatccagaccaagatggaggagattggccgcatttcaatagagatg cacgggaccctggaggaccagctcaaccacttgcggcaatatgagaaaagcatcgtgaat tacaaaccaaagattgaccagttggaaggagaccaccagctgatccaggaagcgcttatc tttgacaacaagcacaccaactacaccatggagcatatccgagtgggctgggaacagtta ctaacaacaattgctagaaccatcaacgaagtggaaaaccagattctgacccgtgatgcc aaaggaatcagccaggaacagatgaatgagttccgggcttctttcaaccattttgacagg gaccactccggcacacttggccctgaggaattcaaagcctgtctcatcagcttgggttac gatattggaaacgatgcacagggagaggcagagtttgcccgcatcatgagcattgtggac cctaaccgtttgggtgtagtgacgttccaggccttcatcgacttcatgtcccgggaaaca gcagataccgatactgctgaccaagttatggcttccttcaagatcctggctggagataag aactacatcactgtggatgaattacggcgggaactgcctcctgatcaagctgaatattgc attgctagaatggcaccctacaatggccgcgatgctgtacccggtgccctggactacatg tccttctccacagcgctctatggcgaaagtgacctttaa

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