Empidonax traillii (willow flycatcher): 114061514
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Entry
114061514 CDS
T05887
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
etl03037
]
114061514 (TTC28)
Cilium and associated proteins [BR:
etl03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
114061514 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
RPN7
TPR_16
TPR_19
TPR_NPHP3
TPR_6
TPR_11
TPR_9
TPR_17
ANAPC5
DUF3856
Motif
Other DBs
NCBI-GeneID:
114061514
NCBI-ProteinID:
XP_027747854
LinkDB
All DBs
Position
Unknown
AA seq
2474 aa
AA seq
DB search
MEQQAPPPPPGAVAGGRARRERDAEPARISFFGSKSLGRKSPDSPMLSKAEFVEKVRQSN
QACHDGDFHTAIVLYNEALGVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARLLNPKWP
KAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRESLEPTYQQL
QKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWS
LGNTEKSTGYMQQDLDVAKSLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMK
LKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIA
MGDFENAVQCHEQHLKIAKELGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQE
LAEKSIEMRAYAGLGHAARCMQDLERAKQYHEEQLHIAESLQDRAAEGRASSNLGIIHQM
KGDYDTALRLHKTHLSIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISME
VNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCS
RGEYVQAAPYYEQYLRLSPELQDMEGEGKVCHNLGYAHYCLGNYEEAVKYYEQDLALAKD
LHDKLSQAKAYCNLGLAFKALMDFSKAEECQKYLLSLAQSLNNSQAKFRALGNLGDIFVC
KKDVHGAIKFYEQQLSLAHHVKDRRLEASAYAALGSAYRMVQKCDKALGYHTQELEVYQE
LGDMPGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDPSIEAQVYGNMGITKMN
MNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDFEEAIKYYEQYLSV
AQSLNRMQDQAKAYRGLGSGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGELGSL
HSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYETALQYHQLDLQI
AEETNNPAGQGRAYGNLGLTYESLGTYERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRT
HHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEESQHQLYRASAL
FETIRHEVQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVE
RQTGQQDSDPYSPVTLDQVLETVNGQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEYYLG
DSLTENTGDFHEANSVTLQTLTNSALEQHISSVREALGVDSYYTRACASSETESEAGDIM
DQQFEEMNNKLNSMTDPTGFLRMVSRNNLMNRSCQSMTSLFSSTMSPVKDGTSSLPRRQT
SFTKPPLRALYDLLIGPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGSSSNEYL
YERFSLIAVPSIQSLNPSSKSHVRKNTPAYSSSTSMAAVIGNPKLPSAVMDRWLWGPMPS
AEEEAYMVSELLGCQPLVGSASTKERVMSALTQAECVHFATHVSWKLAALVLTPNSDSNP
ASSKSSFGNPYTIPESLRMQDDASDVESISDCPPLQEFLLTAADVLDLRLPVKLVVLGSY
QESSSKVTSDGVIGLTRAFLAAGAQCVLVSLWPVPVAASKMFVHAFYSSLLNGMKASAAL
GEAMKTVQSSKQFSHPANWAGFMLIGSDMKLNSPSSLVGQALIEILQHPERARDALRVLL
HLVEKSLQRIQNGQHNSMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPASGLPAAVFFP
TSDPGDRLQQCSTTIQSLLGLPNPALQALCKLITASETGEQLINRAVKNVVGMLHQVLVQ
LQAGEKEQDFSSAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQATRRT
MHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPVPHYQNPPFSPTCPDSIAS
DAISVYSLSSIASSMSFVSKPESMLDGVGHRGRQDYERPKNIYPHRSAAQSQLSPQATTA
ASKDEEEYEGFSIISNEPLGSYQENTNPRFSPDHKQPKTGQTGGIKESVNSKGSVSTPNS
PVKMTFVPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDSNPKLDPQELAQKILE
ETQSHLIAVERLQRSSSQLSKGSNSDDGAPAPAGVSAFRSSETSAFSRPVSSSQRNQSSP
LAIKPKPPTRSSSLQKVSSGYNSPTTSEMSNREGTGQYSGQPSPGCDSQGSLTEQPPFKL
KYPSSPYSAHISKSPRNISPSSGHQSPGGSTPSPALSYSSAGSARSSPADAPDIDKLKLA
AIDEKVQAIHNLKMFWQSTPHHSTGPIKILRGAPGTMTSKKDVLSLLNLSPRHSKEESAE
KLELKDLSIEQHLAASPQKIPPNGHRHPETTNAVTSAHSPPPGSTGGAVRPLRLPAGNGY
KFLSPGRFFPSSKC
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaggcgccgccgcccccgccgggggccgtggcggggggccgggctcggcgg
gagcgggacgcggagcctgcccggatttctttctttggatcaaaatctcttggaagaaaa
agtcctgacagtcccatgttgagcaaagctgagtttgttgagaaagttcgccagagcaac
caggcttgccatgacggcgatttccacacggcaatcgtgctgtacaacgaggccttgggg
gtggacccccagaactgcatcctctacagcaaccgctcggcagcctacatgaaaatccag
cagtatgacaaggccctggatgatgcaatcaaagcaagacttctgaatcccaaatggcca
aaggcatacttccgacagggcgtggccctgcagtacctgggacgccatgcggatgcgctg
gccgcgtttgcgtcagggctggcgcaggatcccaagagccttcagctcctggttggcatg
gtcgaggccgccatgaagtctcccatgcgagagtccctggagcccacctaccaacaactg
cagaagatgaagctggacaagagcccctttgttgtggtgtctgtgatcggccaggagctc
ctgactgcgggccaccatggggcctctgtggtggtgctagaggctgccctgaagattggc
acttgcagcctgaagctgaggggatcagtgttctctgcactgagcagtgcatactggtcc
cttgggaacacagagaaaagcactggatacatgcagcaggacttggacgtagccaagagt
ttaggtgaccagacgggagaatgccgagctcatggtaatctgggctctgcattcttctcc
aaaggaaattaccgggaggcccttactaaccacagacatcagctggtgcttgccatgaag
ctcaaggacagagaggcagcgtcctcggctctgagcagtctgggccacgtgtacacggcc
atcggggactacccaaacgcgctggccagccacaagcagtgtgtcctcctcgccaagcag
tccaaagacgagctctctgaggcgcgggagctgggcaacatgggagcagtgtacatcgca
atgggggatttcgaaaacgcagtgcagtgccacgaacaacatctgaagatcgccaaggag
ctggggaacaagcgggaggaagctcgagcctacagcaacctgggcagtgcttaccactac
cgcaggaactttgacaaagccatgtcctaccacaactacgtgttggagttggcccaggag
ctggctgagaagtccattgagatgcgagcttatgctggcctgggccacgcggctagatgt
atgcaggacctggagagggctaagcagtaccatgaagagcagttgcacattgctgagagc
ctgcaggaccgagctgctgaaggcagagcctcctccaatctaggaatcattcaccagatg
aaaggcgactacgacactgcgctgcggctgcacaagacacacctgtccatagcgcaggag
ctgagtgattacgcggcccagggccgggcctacggcaacatgggcaacgcttacaacgct
ctcggcatgtacgaccaggctgtcaagtaccatcggcaggagctgcagatttccatggaa
gtcaacgaccgtgcctctcaggcgtccacacatgggaacttggcggttgcctatcaggcg
ctgggtgcccatgaccgtgccctgcagcactaccaaaatcacctcaacatcgcgcgggag
ctgcgggacatccagagcgaagcgcgggccctcagcaatttgggcaacttccactgctcg
cggggagagtacgtgcaggcggccccgtactacgagcagtacctgcgtttgtccccagag
ctgcaggacatggaaggggaggggaaagtttgccacaacctcggctatgcccattattgc
ctcgggaactatgaggaagctgttaagtactacgagcaggatcttgccttagcaaaggat
ctgcatgacaagctgagccaagccaaggcctattgcaacctgggcctggccttcaaagcc
ctgatggacttcagcaaagcagaggagtgtcaaaagtacctcttgtccctggcacagtct
ctgaacaattcccaggccaaattccgagccctggggaacttgggggatatttttgtctgt
aaaaaagacgtacatggtgcaataaaattttacgagcagcagttgagcttagcccatcat
gttaaagacaggagactggaagccagtgcctatgcagccttgggctctgcgtacaggatg
gtacagaagtgtgacaaggctttaggttaccacacgcaggagctggaggtgtatcaggag
ctgggggatatgccgggcgaatgcagagcacacggtcaccttgctgcagtttacatgtca
cttgggaagtacaccatggccttcaagtgctacgaagaacagctggagctggggcagaag
ttaaaggaccccagcatcgaagcccaagtctacggtaacatgggcattaccaagatgaac
atgaatgtcatggaggaggcgattggctactttgaacaacagctggccatgctgcagcag
ctcagtgggaatgaatctgtgttagatcggggtcgagcctatgggaacctgggagattgt
tatgaggctctgggagattttgaggaagctataaagtattatgaacagtacctgtctgtg
gctcaaagcttgaaccgtatgcaagatcaggcaaaggcctaccgaggcttgggcagtggg
cacagggctatgggaagtttgcagcaggctctggtgtgctttgagaagaggcttgtagtg
gcacatgagctgggggaggcatttaacaaagcccaggcctacggggagctgggcagcctg
cacagccagctgggaaactacgagcaagccatctcctgcctggagcggcagctgaacatc
gctcgggagatgaaggaccgagccctggagagcgacgctgcctgtggcctgggcggggtc
taccagcagatgggcgagtacgagaccgccctgcagtaccaccagctggacctgcagatc
gctgaggagaccaacaaccccgctggacaaggccgggcctacggcaacctgggcctgacc
tacgagtccttgggcacctacgagagggcggtggtttatcaggagcagcacctcagcatt
gcagcacaaatgaatgaccttgtagcaaaaactgtgtcttacagcagcctggggaggact
caccatgctttacagaactactctcaggctgtgatgtatctgcaggaaggactgagactg
gcagaacagctgggacgcagagaagatgaagcaaaaatccgtcacggccttggcctctcc
ctctgggcgagtgggaacctggaggagtcccagcaccagctctaccgggcttctgcactg
tttgaaaccattcgacacgaggtgcagctgagcacagattacaagctgtcactcttcgac
ctgcagacatcctcctatcaggccctgcagcgggtgcttgtcagtctgggtcaccatgat
gaggcgttggcagtagcagagagaggacgaacaagggcatttgctgacctgctcgtggaa
cgtcagaccgggcagcaggactcagatccctattctccagtgacccttgaccaggtcctg
gagactgtgaatggccagaggggacttgttctctactactcactggctgcaggttatctg
tacagctggctgctggctcctggggcaggtattctgaaattccatgagtattatctgggt
gacagcctgacagaaaatactggggatttccatgaagccaacagcgtgaccctgcagact
ctgacgaactcggcgctggagcagcacatctccagtgtgcgggaggctctgggagtggat
tcctattatacccgagcctgtgccagtagcgagacggagagtgaagctggggatatcatg
gaccagcagtttgaggagatgaataacaagctgaactcaatgactgatccaactggcttc
ctgaggatggtcagcaggaacaacctgatgaacaggagctgccagagcatgaccagtctg
ttcagcagtaccatgtctcctgttaaggatggaacatcatcgcttccaaggaggcagact
tccttcaccaaacccccgctccgtgcgctctacgacttactgataggacccatggaagga
ggtttgatgcattccagtgggcctgttggccgccaccgtcagctgatcctggttctggag
ggagaactgtacctcattccctttgctctcctgaagggcagttcatccaacgagtacctc
tatgagcgcttcagcctcattgcagtgccgtccatccagtcgctgaatcccagctccaag
tcccatgtgaggaagaatactcctgcttactccagttctacctcaatggcagctgtcata
ggaaatcccaagctcccttcagcagttatggacaggtggctgtggggacctatgccctct
gcagaagaggaagcatatatggtgtctgagttacttggctgccagcctttagtcggcagt
gcgtcaacaaaagagagggtcatgagtgccctcactcaggcagaatgtgtccattttgca
acccatgtctcctggaagctggctgctttggtcctgacacccaacagtgacagcaatcca
gccagcagcaagagttcttttgggaacccctacacaatcccagaatctcttcggatgcag
gatgatgccagtgatgtggaaagcatctcagactgcccccctcttcaggagttcctgctt
acagcagctgatgtcctggatctgcggcttcctgtcaagctcgtggttcttggctcttac
caggagtccagcagcaaagtcacttccgatggagtcattggcttgacaagagcattcctg
gcagctggggctcagtgtgtccttgtgtcactctggcccgtccctgtggctgcttccaaa
atgtttgtgcatgccttctattcctctctcttaaacgggatgaaagccagtgcagccctc
ggagaagcgatgaaaaccgtgcagagcagcaagcagttctcccatccggccaactgggca
ggcttcatgcttattgggagtgatatgaagctgaacagcccttcttcgctggtaggacag
gccctgattgagatcctgcagcaccctgaaagggcccgagatgctctgcgtgtcctgctt
catctggtggagaaatcactgcagcgaatccaaaatgggcagcacaactccatgtacacc
tcccagcaaagtgtggagaataaagttggtggcattccaggctggcaggcactcctcacg
gcagtgggatttcggctggacccgccagccagcggcctcccagcagcagtgttcttccca
acctcagaccccggggaccggctgcagcagtgcagcaccaccatccagtccctcctaggt
ttgcctaaccctgcacttcaggcactttgtaaacttatcactgcttcagaaacaggagaa
cagcttatcaacagggctgttaaaaatgtggtgggaatgctgcatcaagtcctggttcaa
cttcaggcaggcgagaaggagcaagatttctcctctgcaccaatacaggtctccatcagt
gtccagctctggaggctgcctggctgtcatgagtttctggcagctctaggttttgacctt
tgtgaagttggccaagaggaggtgattctgaaaactgggaagcaagctaccaggaggact
atgcactttgctctacaatccttgctggcactttttgattctacagagctgcccaagcgc
cttagcctggacagttcctcatcactggagtcattggcttctgctcagtctgtttccaac
cctgtaccccactatcaaaaccctccattctctcctacctgtccagacagcattgcctca
gatgccatttctgtgtacagcctgagctccattgcttcctccatgagctttgtttccaag
ccagagagcatgctggatggggtgggacacagaggtcgccaggattatgagaggcccaag
aacatctatccacacaggtccgcagctcagagccagctgtccccccaggccaccactgca
gccagcaaagatgaggaagagtatgaaggtttctctataatcagcaacgagcctttgggc
agttaccaagaaaatacaaacccaagattttctcctgatcacaaacagcccaaaactggt
cagactggaggtattaaagagtctgtcaactccaaagggagcgtaagtactccaaattct
cctgttaaaatgactttcgtccccagtccaaattcacctttccaaaaagttgggaaactt
gcaagttctgatactggggaatctgaccagtctagcactgaaaccgacagcactgtcaaa
tcccaggaagacagtaatccaaagctcgatccacaagagctggcacaaaaaattctggag
gaaactcagagtcacctcattgctgttgaacgtcttcagagaagcagcagccagctaagc
aagggcagcaattcggatgatggggctcctgccccggccggcgtgtccgcgttccgctct
tcggagaccagcgcgttcagccggcccgtcagctccagccagaggaatcagtcttcacct
cttgcaattaaaccaaagcctccaacaaggagttcatcccttcagaaggtgagctctggc
tataacagccccacaacatcggagatgtcaaacagagaaggcacgggtcagtacagtggg
cagccgtctccaggttgtgattcacaggggtccctaaccgagcagcctccctttaaactc
aagtaccccagctctccttacagcgctcatatttctaaatcacccagaaatatatctccg
agctcagggcatcagtctcctggtggcagcactccatctcccgctctttcttattcatca
gctggttctgctcgctcgagtccagctgatgccccagacatagacaaattaaaactggct
gccattgatgaaaaagtgcaagcaattcacaacttaaagatgttctggcaaagcactccc
caccactccactggcccaataaagattctccgaggagctcctggaacaatgacttctaag
aaagatgtcctcagcttgctcaatttgtctccgcggcacagcaaagaagagagcgcagag
aagctggaactaaaggacctatctattgagcaacaccttgctgcttcgccacaaaagatc
cctccaaatggacacagacaccctgaaaccacaaatgcagtgacatcagctcattccccg
cctcccggcagcactgggggagccgtgcggcccctgaggctgccagcggggaacgggtat
aaatttttgtcaccgggaagattttttccttcctccaaatgttga
DBGET
integrated database retrieval system
