Empidonax traillii (willow flycatcher): 114061518
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Entry
114061518 CDS
T05887
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl00600
Sphingolipid metabolism
etl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
114061518 (SMPD4)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
114061518 (SMPD4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
114061518
NCBI-ProteinID:
XP_027747864
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MAGPHLQQPSFLLATLKADCVNKPFAQRCHDLETVIEELPAKELHGIFPWLVESIFGSLD
GIIVGWNLRCLQGRTNPNEYSVALDFLDPSGPMMKLVYKLQAEEYRYDFPVSYLPGPVKA
SIQEQVLPECSLYHNKVQFPSSGGLGLNLALNPFEYYMFYFAISLITQKNSPVTHHVSPS
NSAYFILVDTYLKCFLPTEGSVLPPPSSNPGGAIPSPTPRSPAVPFSSYGMHHTSLLKRH
IAHQPSVNADPASQEIWRSETLLQIFVEMWLHHYSLEMYQKMQSPHVKLEVLHYRLSISS
KHHGSPAQSSYQALHAYQESFKPTEEHVLVVRLLVKHLHAFSNSLKPEPLSPSAHSHTAS
PLEEFKRVVIPRFVQEKLYIFLQHCFGHWPLDASFRAVLEMWLSYLQPWRYAPEKPPQSA
EPLPRSVSEKWAAFIQENLLMYTKLFVGFLNRALRTDLVSPKNALMVFRVAKVFAQPNLA
EMILKGEQLFLEPELVIPHRQHRLFMSPTLGGSFLSSRSPAVTDASFKVKSHVYSLEGQD
FQYKQMFGTEVRNLVLKLAQLICQAQQTAKSISDHSAETMATQSFFSWFRFTPSDMNGSY
TGNDLDEIGQDSIKKTDEYLEKALEYLCQIFKLSEAQLTQMMMKCGTAQDENGKNQLPDC
IQSENGLILTPLGRYQIINGLRRFEVQYQGDAELQPIRSYENATLVRLLFRLSSVLNERF
ADQMEVLCSREDFVGRLCRYHLINPHLVQKIRFSPVVRDRTSQNWGPRISLRFLASYRTL
ISLLMIYFLASWFYIGPVGCTFIILIGYFLYAVIMTFFFEGWKPHEH
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggccgggccgcacctgcagcagcccagcttcctgttggccacgctgaaggcggactgt
gtcaacaaaccgttcgcgcagcggtgccacgacctggagaccgtcatcgaggagctcccc
gccaaggaactgcatggcatcttcccgtggctggtggagagcatttttggtagcctggat
ggcatcattgtgggctggaatcttcgctgtttgcaaggaagaacaaatcctaatgaatat
tctgtggctttggatttcctggatcccagtggcccgatgatgaagctggtttacaaactc
caagcagaagagtacagatatgatttcccagtctcttatcttccaggccctgtgaaggct
tcaatacaagagcaagttctgccagaatgttctttataccacaacaaagtccagtttcct
tcatctggtggtttaggtttgaatttggctcttaatccatttgaatattacatgttttac
tttgcaattagtttgattacacagaagaactcacctgtcacccaccacgtcagcccttcc
aacagtgcttacttcatcctggtggacacgtacctcaagtgtttcctgcccacagaagga
agtgtccttcctccaccttcttcaaatcccgggggagccatcccgtccccgacgcccagg
tctccagcagtgcccttctcttcctatggcatgcaccacaccagcctgctgaaacgccac
attgctcaccagccctctgtgaacgctgacccggcttcccaggagatctggagatcagaa
acgctgcttcagatctttgttgaaatgtggcttcatcattattcactggaaatgtatcag
aaaatgcagtcccctcacgtcaagctggaggttctccactaccgactcagtatctccagt
aaacaccacggtagtcctgcccaatccagctaccaggccctccacgcataccaagagtca
tttaagcccactgaagagcacgtgctagtggtaagactgcttgtgaaacatctgcatgct
ttcagcaacagcctgaaaccagagcccctctccccttcagcccactcccacacagccagt
ccactggaggagtttaaaagggttgtaattcctcggtttgtccaggagaagctttacatc
tttctgcaacactgctttggccactggcctctggatgcctctttcagagcagtcctggag
atgtggctgagttacctgcagccttggagatacgctcccgaaaagccgccccaaagcgcg
gagcctttgcctcgcagcgtgtcggagaaatgggctgccttcattcaagaaaacctactc
atgtataccaagctgtttgtaggatttctgaacagagctcttcgaacagacttggtcagc
cccaaaaacgccctcatggtgttccgagtagctaaggtctttgctcagcccaaccttgct
gaaatgatcctgaaaggagaacagttattcctggagccagaacttgttattccccaccgt
caacaccgactttttatgagccccacacttggggggagttttttgtcatcacggtctcca
gctgttacagatgcctcatttaaggtgaagagtcatgtttacagcctggaaggacaggac
ttccagtataaacagatgtttggcacagaagtcaggaatttggtgttaaaacttgctcag
ttaatttgtcaggcacagcagacagcaaaatccatatcagaccattctgcagagacaatg
gctacccagtccttcttttcatggtttagatttacaccatctgacatgaatggttcctac
acaggcaatgaccttgatgaaattgggcaagacagcatcaaaaaaacagatgaatattta
gagaaggcactggaatacttgtgccaaatctttaagctgagtgaagcccaactgacccag
atgatgatgaagtgtgggacagctcaagacgagaatggaaaaaaccagcttccagactgc
attcaaagcgagaacggcctcattctcacaccccttggcaggtaccagatcataaacggc
ttgcggcggtttgaggtgcagtaccagggagacgctgagctccagcccatccgcagctac
gaaaatgccacccttgtccgcctcctgttccgcctgtcctcggtgctcaacgagaggttt
gccgatcagatggaagtgctttgctccagggaagattttgttggcagactttgtcgctat
catctcatcaacccccaccttgtacagaaaatcaggttcagtcccgtggtgagggacaga
acgagccagaactggggaccaaggatcagtctgaggtttctggccagctacaggactctc
atttctttgctgatgatctacttccttgcatcctggttttacatcgggccggtgggctgc
acattcattatcctaattgggtattttctttatgctgtaataatgacttttttctttgaa
ggatggaaaccacatgaacactag
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