Empidonax traillii (willow flycatcher): 114061563
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Entry
114061563 CDS
T05887
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114061563 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114061563 (HERC3)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114061563 (HERC3)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
HECT type E3
114061563 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
114061563
NCBI-ProteinID:
XP_027747957
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT
MEDAVMVPRLIKKLNQQMILQVSCGNWHCLALAADGQFFTWGQNHYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGLIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNSVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILLD
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYISLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHVEYDKFYIPEISSLVDIQEDYLMWFLQQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQ
LLDYPGEDVEETFCLNFTICRESYGVTEQKNLIEDGDKILVQKDNREEFVEAYVNYIFNL
SIHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSTTSGEQYLPVAHTCYN
LLDLPKYSSKEILSARLVQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggctactcgtcttttggacaacctgggataggtagtaacctccaggtc
atcattcctgaaccacaggtgtatggattcattcatgacagaaatgtcaaggaggtggca
tgtggaggaaatcactctgtgttcctgttggaagatggggaggtgtatacctgtggcttg
aacaccaaaggtcaactggggcatgactgtgaaggaagcaagccagagcaaattggagcc
ctggctgggcagcacattgtgcacgtggcctgtggggagtctcacagtgtggcactcagt
gaccagggccagctcttctcctggggcgccggcagcgatggacagctgggactcaccact
atggaagacgcagtgatggtaccaaggttgataaagaaattgaaccaacagatgatactg
caggtttcctgtgggaattggcattgcctggctctggcagcagatggccagttcttcaca
tggggccagaaccactatggtcagctgggcttgggcaaagaatgtccctcccaggccagt
ccacaacgtgtcaagtctcttgatgggattcctttggctcaggttgcggcaggcggagcc
cacagttttgccctttctctctcaggagctgtgtttggctggggaaagaacagctcagga
cagctgggactgagtgatgaacgagaccgagaatccccttgccatgtgaagctgttgcga
tctcagaaggttgtttacatcagctgtggagaggaacacacagcagtcctgacaaagagt
ggaggggtgttcacgttcggtgcaggttcctgtgggcaactgggacatgactccatgaat
gacgaagtgaacccccgaagagttcttgagctaatgggcagtgaagtatcccagattgct
tgtggaagacatcacactttagcctttgtgccttcttcaggattgatctatgcatttggc
tgtggaacaagaggccagctgggaacggggcacacttgcaatgttaagtgcccctctccc
gtcaagggtcactgggcagctcataatgggcagctctcagggaaacctgatgcctgtaaa
tatcacattgttaaacatatcttctctggaggagaccaaacatttgtgctttgctccaaa
tacgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaatagtgttgtccagatactatcctcagctgcctgctggaatggaagcttc
ttggagaagaaaatcgatgaacattttaaaaccagtccaaagatcccagggattgatcta
aactccaccagagtgctgtttgagaagctgatgaactctcagcactccattctcctagac
cagatactcaagagctttgaaagctttttgattcctcagctgtccagctctccaccagat
gttgaggcaatgaggatctatctgattctccctgaattcccacccttccaagactccaag
tattatatctctctaacgcttcctctagcaatggctattctgcgtctggataccaacccc
agcaaagttcttgataactggtggtctcaagtgtgcccaagatatttcctcaggctagtg
gacctgtataaaggtgcagtggtttacctcctcagtggaaggaagacgctgttgattcca
gtcctgttcagcagctacattacagctgctctcagactcctggagaaactccataaggta
aatcagaaggttaaacatgtggaatatgataagttttatatccctgagatttccagcttg
gtggacattcaggaggattatctcatgtggttcttgcaacaggctggaatgaaagtaaga
ccatctatcatgcaggatgctgtgaccctctgctcttatcctttcatctttgatgctcag
gctaagaccaagatgttacagacagatgcagaactacagatgcaggttgcaataaatggt
gcaaatttgcagaatgtcttcatgcttctcacgttggagcctctgctggccagaagccct
ttcctggtacttcatgttcgcaggagtaacttagttggtgatgctctaagggagttgagc
atccattcagacattgatttgaaaaagcctcttaaagtcatctttgatggtgaggaagct
gttgacgccgggggagtgacaaaggaatttttcctcctgcttttaaaagaactcctcaac
cctatctatggcatgtttacttactacccagagtcaaacctgctgtggttctcagacacg
tgttttgtagaacacaactggtttcacttgattggcatcatatgtggtcttgcaatatac
aatttcacagtggtagaccttcactttcccttggctctgtacaaaaaactcttgaacgtg
aagccctgcctagaggatttgaaggagctatcccctacggaaggaaggagtcttcagcaa
cttttagattaccctggggaagatgtggaagagacattctgtttgaattttacaatctgc
agggaaagctatggtgtgacagagcagaagaacctgattgaagatggagataaaattctg
gtgcagaaggacaatagggaagaatttgttgaagcctacgtaaattacatcttcaacctc
tccatccatgagtggtacacggccttttctactggcttcctgaaagtatgtggtgggaaa
gtcctggaactcttccagcctacagagctcagggccatgatagttggaaacagtaactac
aactgggaggaactggaggagagtgctgtctataagggagactacactgccacacaccca
actgtgagaatgttttgggagacctttcatgcatttcctttggaaaagaagaagaaattt
ctcttgtttctgacgggcagtgaccgcattcccatctacggcatgtccagcctgcgcatc
atcatccagtccaccaccagcggggagcagtacctgcccgtggcacacacctgctacaac
ctcctggacctgcccaagtacagcagcaaggagatcctcagcgcccggctggtgcaagcc
atcgatcactacgagggcttcagcttggcctga
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integrated database retrieval system
