Empidonax traillii (willow flycatcher): 114061618
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Entry
114061618 CDS
T05887
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114061618 (SH3TC1)
Membrane trafficking [BR:
etl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
114061618 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_1
ARM_TT21_4th
SH3_1
TPR_10
SH3_2
Csd3_N
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
114061618
NCBI-ProteinID:
XP_027748072
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MESSAMGESTSMLSINAAFPGLERKEEKKLERKEMEQGRCRSDCKHVEGSATISTVRDGV
GIDVLQEQMECSQSEKCMNISSRIFPNQAENFPTDISLKLTMVRRKSGCPDPKLQRQLRG
QLRLLENDSREVMAVFSELSARLLSIHSDQDLIVVTFKTFEEIWKFRTYHSLGFINHCME
NLFLDQSFWLSSQEEEEIGIEVCINEKSLNLMCRSLLLQEGSLFVLCPDNLIRKIMATEN
EIEAYFETEDVTEDVTGGSADSNASVLPKAFLEPLNPFHQWFLKGYSNPIIDFSCKTESK
SIREVAMGSCLAVMNYASIVSEELSFQEGDKIEILGYLIECMEWFLGRHVFTGQIGFVKT
SHVKLDLSRNKPQDLDFLDAKELSFFSKEKKLEEVIHLLKQTSITDVCSVYRIDELEEPE
FHKAHEYEIPCSHSSTGSISKNGKIEELLKNFKNLEATQAGEPATEEKESASPSKTEIFP
PPEGPRFHICQDDVQAFDIPDSLLFFLNRKEYESNFKSLYDFSYSFTNTIFYGFSEEEEL
VSFLRLAREAAKKAGMSWALARLCFLLGRLSVKKLKFSQARVYFEEAWRAVAGEFNDLYF
IIALYTNLSVIYLTQKNKEKCAQVFDKATSLLMGIPNYICSAELESDLLKYALKRTVLSQ
NKHAEARACFLLAKHYSTRKQHDEALPFLERFQLLLNDLGLQNNLSNNCYFKLAESYSEK
CLPHIVLSCIKVTSSQSSSTLMDSLKRIDLVIKNAPKLYGLRKLRQIFPSQITPYLIQAL
SSVFTDEQQGLCNIIYLHLAKLYSHHKQYGKAIAYMMKALDSDVSAKLEETINYLVSLAW
LHILYKQYDVALAILNTVVGSSWSSPQQLGIAYNMLAIALKRTNHTKEAAESYYKALRLS
EEAEKTHNQAIALANFGALCLHAAASKLAEHYFIRAVKLFSKLPSTDCGQDFIQVLLQLG
CYYVGGTQREKGRFYYEWAFLVAMEISHLESQLQAIKLLCQFYSTVVPNEAQCVIYNEYQ
LSLARKMSNKVLEGQILETISQLYLSLGTERAYRSALEYTKRSLGIFIDLQKKEKEAYAW
LQAGKIYYVLRQNELVDLYIQVAQDAALCTGDPNLGMELFEAAGDIFFNGTWEKDKAVTF
YRDRALPLAVQTGNKTAELRLCNKLVELLMNLKAYEESLEYAKTALMLSVNLGNQLNERI
AYHRLAAIHHHLGHCELAEHFYLKALSLCSSPLEFEEETLYYVKVYLTLGDIIFYDLKDP
FDAAGYYHLALAAAMDLGNKKAQLKIYTRLAVIYHNFLVDREMSLFFYQKARTFATELNV
RRINLAPDRCYKRP
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggagagttcagcaatgggagagagcacatccatgctcagcattaatgctgccttccct
ggtctggagagaaaggaagaaaaaaaattggagaggaaagaaatggagcagggaaggtgc
aggtctgactgcaaacacgtggagggcagtgctaccatcagcactgtcagggatggagtc
gggattgatgtgttgcaagaacagatggagtgttcccaaagtgaaaaatgcatgaatatc
agttcaaggatctttccaaatcaggcagagaattttccaactgatatctccttgaagtta
acaatggtaagacgaaagagtggatgtcctgatcccaaactccaaagacagctcagaggg
cagcttcgtcttcttgaaaatgacagcagggaggtgatggcagttttcagtgagctctct
gccagactcctgtctattcatagtgatcaagatctaatagtggtgacgtttaaaactttt
gaggaaatatggaagtttcgaacctaccactcactgggttttataaatcattgcatggag
aatttattcctagatcagtctttctggctatcttctcaagaggaggaagaaataggcatt
gaagtctgtataaatgaaaaatcattaaatttgatgtgcagaagtctgctactacaggaa
ggatcactttttgttttatgtcctgacaatctgataaggaagataatggctacagagaat
gaaatagaagcatattttgagactgaggatgtcactgaagatgtaacaggtggatctgcg
gatagcaatgcatctgtattgcctaaggcttttctggagccactgaaccctttccatcaa
tggtttcttaaagggtattctaatcctattattgatttttcttgtaaaactgaatctaaa
tccatcagagaagttgcaatgggatcttgtctagctgtgatgaattatgcaagtattgtg
tcagaagagctgagtttccaggagggggacaaaattgagatccttggatacctcattgaa
tgcatggaatggtttcttggaagacatgtgtttactggccaaataggttttgtaaagaca
agtcatgtgaaactggacttatctagaaataaaccacaagatctggattttcttgatgca
aaagagctatcttttttttcaaaagaaaaaaaattggaagaagtaatacatttgttgaaa
caaacctccatcacagatgtttgctctgtgtacagaatagatgaattagaagaaccagaa
tttcacaaagctcatgaatatgaaattccatgctcacattctagtacaggatccattagc
aagaatggcaagatagaagaattgctgaagaacttcaagaatttggaggccactcaggca
ggagagccagctacagaagaaaaggaatctgccagcccttcaaagactgaaatctttcct
ccacctgaaggacctcgcttccacatatgtcaagatgatgtccaagcatttgacatccct
gactcactgctattcttccttaataggaaagagtatgagagcaacttcaaaagcctgtat
gatttctcttattcgtttaccaataccatattttatggattttcagaagaagaagaactg
gttagttttttaagattagcaagagaagcagcaaagaaagcaggtatgtcctgggcacta
gcaaggctatgctttctcttaggcaggcttagtgttaaaaagctgaagttttcccaagct
cgggtgtattttgaggaagcatggagagcagtagctggagagtttaatgatttgtacttt
attattgctctttatacaaatctatcagtcatctacttgacacagaagaacaaagagaag
tgtgctcaagtttttgacaaggctacatctcttctcatgggaattcccaactacatttgc
agtgctgagctggagtcagacttactgaagtatgctctgaagaggacagttttgagccag
aacaaacatgcagaggcaagagcatgctttctactggcaaaacattacagcacacgcaaa
caacacgacgaggcgctgccgttcttggaaaggtttcaactcttgctcaatgacttgggt
ttacaaaacaacttatccaacaactgttatttcaaactagcagagtcctatagtgaaaag
tgtttgccacacattgtattaagttgcataaaggttacctcctcccagagttccagtact
ttaatggactcactgaaaaggattgatttagtcatcaaaaatgctcccaaactctatggc
ctgagaaagctcagacaaatattcccatcccaaattacaccttacctcattcaagcactt
tcgtctgtgtttactgatgagcagcaaggactgtgcaacatcatctatcttcacttagca
aagctgtacagccaccacaaacagtatggaaaagccattgcttacatgatgaaagcactg
gactctgatgtttctgctaagctggaggaaactattaactatttggtttcacttgcttgg
ttacacattctttataagcaatatgatgtggctttagccattttaaatactgttgtaggc
tcttcatggagcagtcctcaacaactaggcatcgcttataatatgcttgctattgctttg
aaaaggacaaaccatacaaaagaagctgctgagagctactacaaagcactgcgtctttca
gaagaggctgagaagacccataaccaagctatagccctggctaattttggggcactctgc
ctgcatgcagcagccagcaaacttgcagaacattattttatcagggcagttaagctattc
tccaaacttccaagtacggactgtggtcaagacttcatccaagtcctccttcagctgggg
tgttactatgttggtggaactcaaagggaaaagggaaggttttactatgaatgggctttt
ttagtggcaatggagataagtcatctggagagtcaactgcaagcgattaaactgctgtgt
cagttttacagtacagttgttcccaatgaggctcagtgtgtcatctacaatgaatatcaa
ctatctttagctagaaagatgtccaacaaagttctggagggacaaattttggaaaccatt
agtcagctctatttgtctctaggaacagaaagggcctacaggtcagctctggaatatacc
aaaagaagccttggaatatttatagatctccagaaaaaagagaaagaggcatatgcttgg
ctacaggcaggaaagatatattatgtactgaggcagaatgagcttgtggatctttatatt
caggttgctcaggatgctgctctttgcacaggagatccaaatttgggaatggaattgttt
gaagctgctggagacatatttttcaatggtacttgggaaaaggacaaagcagtgactttc
tacagggacagggctcttccacttgctgttcagactggcaacaaaaccgctgaactcaga
ttatgcaataaactggtggaattgctgatgaatctgaaggcttatgaggaaagtctggaa
tatgcaaaaacagctcttatgctcagtgtaaatttaggaaatcagctaaatgaacgaata
gcttaccatcgtctggctgccatccatcaccatttgggtcactgtgaactagctgaacac
ttctatttaaaggccttgtccctctgttcctctcctctggagtttgaggaggaaacactg
tattatgtcaaggtgtacttgaccttaggagatattatattctatgaccttaaggatccc
tttgatgcagcaggctattaccatttggcacttgctgctgccatggacctcggcaataaa
aaagctcagctgaagatttacaccagacttgcagtaatctaccataacttccttgtggat
cgggaaatgtctctcttcttctaccaaaaggcaagaacctttgcaacagagctgaacgtt
aggagaataaatctagctcctgaccggtgttacaagagaccgtaa
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