KEGG   Empidonax traillii (willow flycatcher): 114061823
Entry
114061823         CDS       T05887                                 
Symbol
UFD1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
  KO
K14016  ubiquitin fusion degradation protein 1
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:etl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    114061823 (UFD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:etl03009]
    114061823 (UFD1)
Ribosome biogenesis [BR:etl03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    114061823 (UFD1)
SSDB
Motif
Pfam: UFD1_N1 UFD1_N2 CDC48_2
Other DBs
NCBI-GeneID: 114061823
NCBI-ProteinID: XP_027748459
LinkDB
Position
Unknown
AA seq 307 aa
MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERSAQHEETTDVEADHSGYVSDIGFRAFSGSGNRLDGKKK
GVEPSPSPIKPGDIRRGIPNYDFKIGRITFIRNSRPLVKKVEEDESGSRFIAFSGEGQSL
RKKGRKP
NT seq 924 nt   +upstreamnt  +downstreamnt
atgttctcgtttaacatgttcgaccaccccatcccccgcgtgttccagaaccgcttctcc
actcagtaccgctgcttctcggtgtccatgctggccgggcctaatgacaggtcagatgtg
gagaaaggcgggaagataattatgccaccgtcagctttggatcaactcagccgcctgaac
atcacttaccccatgctgttcaagctgaccaacaagaactcggaccgcatgacgcactgc
ggggtgctcgagttcgtggctgacgagggcatttgttacctgccacactggatgatgcag
aacttgctgctggaagagggaggcctggtgcaagtggagagtgttaatctgcaggttgca
acttactcaaaatttcagccacagagtccagattttcttgacatcaccaatcccaaagct
gtattagaaaatgcattgagaaactttgcctgtctaacgactggggatgttattgccatc
aactacaatgaaaagatctacgagctgcgggtcatggagaccaaaccagataaggccgtg
tccatcatcgagtgtgacatgaacgtggattttgatgctcctttggggtacaaagaacca
gaaagaagtgcacaacacgaagagaccacagatgtggaagctgaccacagtggatacgtg
agtgacataggatttcgagcattctctggttctgggaacagactggatggcaagaagaaa
ggtgtggagcctagtccctcaccgattaaaccaggagacatccgaagaggaattcccaac
tatgacttcaagatcggtagaatcacattcatcagaaactcacgcccactggttaagaaa
gttgaagaggatgaatctggaagccggtttattgccttttcaggagaaggccagtccctg
cgcaaaaagggaagaaagccctag

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