Empidonax traillii (willow flycatcher): 114061930
Help
Entry
114061930 CDS
T05887
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04510
Focal adhesion
etl04512
ECM-receptor interaction
etl04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114061930 (TNR)
04518 Integrin signaling
114061930 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114061930 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
etl00536
]
114061930 (TNR)
Glycosaminoglycan binding proteins [BR:
etl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114061930 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_3rd
Fn3_PBP1
Fn3_Dep-1_2nd
EGF_2
FN3_Tor_3rd
Lzipper-MIP1
TSC22
Motif
Other DBs
NCBI-GeneID:
114061930
NCBI-ProteinID:
XP_027748686
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MGTDSENPVLRNVLISFSLLLLGTVLKPFECRLEATTEPAERTAMDEGGGLANCSPPIKE
QPMVFHHIYNINIPLDSCCSSMFKSSGEEVSSEDERLAEYTEQTSDTESQVTFTHRINMP
KQACKCSTSLPSLQELLSRIEMLEREVSILRDQCTSNCCQENAATGQLDYIPQCSGHGNF
SLESCSCVCMEGWAGSNCSEPLCPRGCSSRGVCLEGQCICDNDYGGEDCSQLRCPAGCGS
RGLCVDGECVCEEGFTGEDCSQLRCPRDCSGRGYCVNGTCVCQEGFAGEDCGWLHCPNAC
SGRGLCRDGLCVCEEGYEGQDCSAVAPPENLRVTGISDSSVELAWDSAGAATEYVVSYQP
AVPGGSQLQQRVPGDWSSITITDLEPGVAYNVSIYAVISDVLSVPVTSRVMTNLATPQGL
KFKTITETTAEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYT
VTVVALKEQARSPPTSNSVSTLIDGPTQIVVRDVSDTVAFVEWTPPRAKVDAILLKYGLA
DGEGGRTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESRPALAQFTTEIDAPKNLR
VGSRTPASLELAWDNSEAEANSYRVVYSTLAGEHYHEVLVPRDTGPTTRATLADLVPGTE
YGIGISAVMDSQQSVPATMNARTELDSPRDLVVTASTETSISLAWTKATGPIDHYRVTFT
PASGMASEVTVSRDESQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPITQLH
FSQLTSSSVNVTWSDPSPPADRLILTYSPRDAEEAQQVTLEGTRRHAGLTGLQPSTEYLV
SLVAVHGAVSSEPVVGSITTGIDAPRDLRVGNVTQESMVVYWSPPIAAFDHYRISYRAAE
GRTDSTALPKDVTEHALHHLEPATKYEIGVKSVRGREESELASITAYTAMDVPLGVTATN
ITPTEALLQWNPPLSDVESYVLILTRRAVAGETILVDGDSQEYQLTNLLPSTTYMVSMYA
TSGPLTSQTISTNFTTLLDPPTNLTASEVTRRSALLSWVPPVGEIENYIMTYRSPDGSRK
ELIVDAEDTWIRLEGLSETTEYTVRLQAAQNAVRSGVISTTFTTGGRVFANPQDCAQHLM
NGDTLSGVYTISINGDLSQRVPVFCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGN
LEDEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKFSVGDSRSLYKLRIGDYNGT
SGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINW
YHWKGHEFSIPFVEMKMRPYNHRNVSGRKRRSLQL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggggactgatagtgaaaacccagtcctgaggaatgtgctcatcagcttcagcttgctc
ctgctgggcactgtcctcaagccttttgagtgccggctggaggcgacgacagagccggcc
gagaggacggcgatggatgaggggggcggccttgccaactgcagcccacccatcaaagag
cagcccatggtcttccaccacatctacaacatcaacatcccgctggacagctgctgctca
tccatgttcaagtcttcgggcgaggaggtgagttcagaagacgagcggctggcggagtac
acggagcagacctccgacaccgagagccaggtcaccttcacccacaggataaacatgccc
aagcaggcctgcaagtgctccacctccctcccgtccctgcaggagctgctgagcaggatt
gagatgctggagagggaggtctccatcctccgggaccaatgcacctccaattgctgccaa
gaaaatgcagccacagggcagctggattacatcccgcagtgcagcggccacgggaacttc
agcctggagtcgtgcagctgcgtgtgcatggagggctgggcgggcagcaactgctccgag
ccgctgtgcccgcggggctgctccagccgcggcgtgtgcctggagggccagtgcatctgc
gacaacgactacgggggcgaggactgctcccagctccgctgccccgccggctgcggctcc
cgcgggctctgcgtggacggagagtgtgtctgtgaggagggtttcaccggcgaggactgc
tcgcagctgcggtgcccccgcgactgctcggggcgggggtactgcgtgaacggcacgtgt
gtgtgccaggagggcttcgccggcgaggactgcgggtggctgcactgccccaacgcctgc
agcggccgcgggctctgcagggacgggctctgcgtctgcgaggaaggctacgaagggcag
gactgctcagcagtggctcctcccgagaacctgcgagtgacagggatcagcgacagctcc
gtggagctggcgtgggacagcgccggggcagccaccgagtacgtggtgtcgtaccagccg
gcggtgccggggggctcccagctccagcagcgggtgcctggcgactggagcagcatcact
atcacggatctggagcccggtgttgcctacaatgtcagcatctacgcagtcatcagcgat
gtcttgagtgtccctgttacctccagggtgatgaccaacctcgccacgccgcagggactg
aagttcaagaccatcacagagacgacagcagaggtgcagtgggagcccttctccttcccc
ttcgacggctgggagatcagcttcattcccaagaataacgagggtggtgtgatcgctcag
ctccccagcactgtcaccaccttcaaccagacggggctgaagccaggggaggagtacact
gtcaccgtggtggccctgaaggaacaagccaggagccctcccacctccaatagcgtctca
accctcatcgacggcccgacgcagatcgtggtgcgggacgtctcggacaccgtggccttc
gtggagtggacgccaccgcgcgccaaggtggatgccatcctgctgaagtacgggctggcg
gacggggagggcggcaggaccaccttccgcctgcagccccccctcagccagtactccctg
caggccctgcgccccggcgcccgctaccacctcgccgtcagtgccctgcggggcgccaac
gagagccggccagccctcgcccagttcaccacagagatcgatgcccccaagaacctgcgg
gtgggctcgcggacgcccgccagcctcgagctcgcctgggacaacagcgaagccgaggcc
aacagctacagggtggtctacagcaccctggccggggagcactaccacgaggtcctggtg
ccacgggacaccggccccaccacccgcgccaccctcgcagatctggtgccgggaacagag
tatggcatcgggatttcggccgtgatggacagccagcagagcgtgccagccaccatgaac
gccaggactgagctggatagcccccgggacctcgtggtgacagcctccacagagacgtcc
atctcgctggcctggaccaaagccacgggtcccatcgaccactaccgtgtcaccttcacc
cctgcctcagggatggcctcggaagtgacggtgtcccgggacgagtcacagctcaccctc
tcagagctggagcccgggacggagtacaccatctccatcatcgccgagaggggacggcag
cagagcctggaggccaccgtggacgccttcacaggtgttcggcccatcacacagctccac
ttctcccagctgacgtcctccagcgtcaatgtcacgtggagcgacccgtccccacctgca
gaccgcctcatcctcacctacagccctcgggacgcggaggaggcgcagcaggtcaccctg
gagggcacccgccggcacgccggcctgacgggcctgcagccctccacggagtacctggtg
tccctggtggccgtgcacggcgccgtcagctccgagcctgtcgtgggctccatcaccaca
gggatcgatgcgcccagggacctccgggtgggcaatgtcacccaggagtccatggtggtc
tactggagccctcccatcgctgccttcgaccactacaggatatcctaccgtgctgctgaa
ggaaggacagacagcaccgccctccccaaggacgtcaccgagcacgccctgcaccacctg
gagcccgccaccaagtacgagatcggggtgaagagcgtgcggggccgggaggagagcgag
ctggcctccatcaccgcctacacagccatggatgtccccttgggggtcacggccaccaac
atcacccccaccgaggcgctgctgcagtggaacccgccgctgtcagatgtggagagctac
gtcctcatcctcacccgccgggcagttgcaggagaaacaattctcgtggatggagacagc
caggagtaccagctgaccaacctgctgcccagtaccacgtacatggtctctatgtacgcc
accagcgggcccctcaccagccagaccatcagcaccaacttcacaactcttttggatcct
ccaacaaatctgactgccagcgaagtcacccgacggagcgccctgctctcctgggttcct
cccgtgggagagatcgagaactacatcatgacctacagatcccccgacggcagccggaag
gagctgattgtggatgccgaggacacgtggatccgcctggaggggctgtcggagaccacg
gagtacacggtgcgcctgcaggctgcccaaaatgccgtgcggagcggcgtcatctccacc
accttcaccacaggagggcgcgtgtttgcaaacccccaggactgtgcccagcacctgatg
aacggggacaccctgagcggcgtctacaccatctccatcaatggggacctgagccagagg
gtgccggtgttctgcgacatgaccaccgacggaggcggctggattgtcttccagcggcgg
cagaacgggctgaccgatttcttccggaaatgggcggattaccgggttggcttcggaaac
ttggaggacgagttctggctgggcttggacaacatccacaagatcacgtcccaggggcgc
tatgagctgcggatcgacatgagggacggccaggaagcggcctacgcctactacgacaag
ttctccgtcggcgactcccgcagcctgtacaagctgcgaatcggggactacaacggcact
tcaggggactccctcacctatcaccagggccgccccttctccaccaaggacagggacaat
gacgtggccgtgaccaactgtgccatgtcctacaaaggggcctggtggtacaagaactgc
caccgcaccaacctcaacggcaagtacggagagtcccggcacagccaggggattaactgg
taccactggaaaggccatgagttctccatcccctttgtggaaatgaagatgcgaccttac
aaccaccggaacgtctctgggaggaagcgacggtccctacagctctga
DBGET
integrated database retrieval system
