Empidonax traillii (willow flycatcher): 114061947
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Entry
114061947 CDS
T05887
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03273
Virion - Lassa virus and SFTS virus
etl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
114061947 (PCDH20)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
114061947 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etl01009
]
114061947 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etl04515
]
114061947 (PCDH20)
Protein phosphatases and associated proteins [BR:
etl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114061947 (PCDH20)
Cell adhesion molecules [BR:
etl04515
]
Cadherins
Protocadherins
114061947 (PCDH20)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
Cadherin_2
Ig_Cad99C_N
Ig_BT4661_1st
Motif
Other DBs
NCBI-GeneID:
114061947
NCBI-ProteinID:
XP_027748697
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MGPPGGRGSPTARGSLQHLLLFLLFVGPFNCFASYSRATELFYSLNEGLPAGVLIGSLAR
DLRLPAAGGQHPAAPQPPLSFTLASHGLGEQYVQLDNRSGELHTSAVEIDREALCVESSG
ATVFGSSAVSSSSPSSEPCLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPRFPVPHIHLS
VPENAPVNTRLAIEHPALDPDMGTNSVQTYRLRDNYGVFTLDVEENESGERTPYLIVMGA
LDRETQEEYVTVIIAEDGGTPPLAGSATLTIGISDINDNCPQFNDSQLNITLYGNSSLGT
HVATVHAVDMDLGSNAQVTYSYSQKVHQPSRDLFHLNESTGAITLSAKVDGGTPKLHRLI
ILGNGPGCIPAVITVLVTIIKVMMRPPEVVPRFIANEVEGVVYLKELEPINTPIAFFTIK
DPDEKYKVSCYLDGDGPFRLSPYKPYNNEYLLETTKPLDFETQQLYEISVVAWNSEGFRV
NKVIKVQVLDDNDNSPVFSEQLIELSIEENNVPNAFLTKLHATDADSGERGQVSYFLGPD
APSYFALDKTTGVLTVSTQLDREEKEKYRYTVKAVDSGFPPRESIATVTITVLDKNDNSP
RFINKDFSFFVPENFPGFGEIGVISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVLRAK
VSLDREQQSSYVLWIEAVDGGDPPLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPS
TLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYGL
YRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPDISIEEKQPQISIEPT
HKKMESASCMPTLVALSIISLGSIALVTGMGIYICLRKGKRHHREDEHLEVQIPLNGRIN
LHMLEKKPVEISNI
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggggcccccgggcggtcgcggcagccccaccgcccgcggcagcctgcagcacttgctc
ctcttcctgctcttcgttgggcctttcaactgctttgccagttacagccgtgccaccgag
ctcttctacagcctcaacgaggggctgcctgcaggggtgcttatcggcagcctggcccga
gatctgcggctcccagctgctggtgggcagcaccctgcagccccgcagcccccactctcc
ttcactctggcctcccatggcttgggggaacagtatgtgcagctggacaaccgctccggg
gagctacacacctcagccgtggaaatcgacagggaagctctatgcgtggaaagcagtggg
gccaccgtctttggatcatctgctgtctcttcttcctccccctcatctgagccatgcctg
ctgctgcttgatgtactggtactgccacaggagtattttcgcctggtgaaggtaaaaatt
gctatccgtgatgtcaatgacaatgctccccgcttccctgtgccccacatccatctctca
gtgcctgagaatgcacctgtgaacacccgcctggctattgagcacccagctcttgaccct
gacatgggcaccaacagtgtccaaacctaccgcctgcgagataactatggggtcttcacc
ctggatgtggaggagaatgagagtggggagaggactccctacctgattgttatgggggca
ctggacagggagacacaggaggagtatgtcacagtcatcattgctgaggatgggggcaca
cctccgcttgcgggcagtgccaccctcactattggcatcagcgacatcaatgacaactgc
ccacagttcaatgactcacagctcaacatcaccctttatgggaattccagcctagggaca
catgtggctactgtccacgcagtagacatggaccttggatccaatgctcaggtcacctac
tcctacagccagaaggtccaccagccatccagagacttgtttcatctgaatgaaagcaca
ggagccatcacactctctgctaaagttgatgggggcactccaaagctacacaggcttatc
atactgggcaatggccctggatgtattcctgctgtgatcacagttctagtgaccatcatc
aaagtcatgatgaggccacctgaagttgtccctcgtttcatagctaatgaagtggaaggg
gtggtttacttaaaggaactggagcctatcaacacccctatagcattttttaccatcaaa
gatcctgatgaaaaatacaaagtcagttgctatttggatggtgatgggcctttcagactt
tcaccatacaaaccatacaacaatgaatatctgttggagaccacaaagcctctggatttt
gagacacagcagctgtatgaaatctctgtagttgcatggaactcagaaggatttcgtgtc
aacaaagtaatcaaagtacaggtcctggatgacaacgacaactcaccggttttctctgaa
cagctgatagaattatctattgaagagaacaatgttcccaatgcttttttgaccaaactg
catgctactgatgctgacagcggagaaagagggcaagtgtcctatttcttaggtcctgat
gccccttcctattttgctttagataaaaccacaggagttcttacagtttccacccagctg
gacagagaagaaaaagaaaaatacagatatactgtcaaagcagtagattctggcttccct
ccaagagaatcaatagcaactgttaccatcactgtattggataaaaatgataacagtcca
agatttataaataaggatttcagcttttttgtgcccgaaaactttccaggttttggtgaa
attggagttataagtgtcacagatgctgatgcagggcaaaatggatgggttgccctttcg
gttctgaatggaagtgatatttttgtcatagataccggaaaaggagttttgagagctaaa
gtctctctggatagggagcagcaaagctcctatgttctgtggattgaagcagtcgatggt
ggtgatcctcccctgtcttctacagcaaaaataactatccttcttctggacataaatgat
aacccccctttggtcctgtttcctcaatctaatatgtcgtatttattagtacttccttct
acccttcctggctctcccattactgaggtctatgctgtcgataaggacactggcatgaat
gcagtcatagcttacagtatcataggaagaagaggccctcgacctgagtcatttaggatc
gaccccaaaactggtaatatcaccttggaagagtcactgatgcaaaatgactacggcctc
tatcggctacttgtaaaagttagtgatcacggctatccagaaccactccattccactgtc
atggtgaacctttttgtcaatgatacagttagcaatgagagctacatcgaaagtttgtta
agaaaggagcctgatatcagtatagaagaaaagcagccacaaatatccatagagcctaca
cataaaaaaatggagtcagcatcttgcatgcctaccttggtagctctttcaataataagc
ttgggttcaattgctttagtaacagggatgggcatttacatttgtctaagaaaaggtaaa
aggcatcacagagaagatgaacacttggaagtacaaatcccattaaatggaagaattaac
ctacacatgttggagaagaaaccagtggagatttctaacatttga
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