Empidonax traillii (willow flycatcher): 114062122
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Entry
114062122 CDS
T05887
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114062122 (VPS50)
Membrane trafficking [BR:
etl04131
]
Protein recycling
Others
EARP complex
114062122 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
114062122
NCBI-ProteinID:
XP_027748994
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESLNDLSPIESFRIPTKEELRELHEEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAVVSSV
SDGNNVMGTEENCFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISATLTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESAGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtttaagaagtcctcaggagagtctt
aatgacctcagtcctattgaaagctttcgaattcctaccaaggaggagctcagagaacta
catgaagaaccaactgatcctcaggcacagcaggaaataattaacagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaagtatgagttagagaggcttcctccagta
ctaagtcttcaagaactggaagagtacagagacaaattaaaacaacagcaagctgctgta
tctaaaaaagttgcagacttgatccttgaaaaacagcctgcatatgttgaggaacttgaa
cgtgttacatcattgcagaccggccttcagttagcagctgttatttgcacaaatggaaga
agacacctgaatatagcaaaggaaggcttcacacaaactagtctggggcttcttgccaat
cagaggaagcgacagttgcttattggactgctgaagtctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagcgagatgttggaggaagaggattatccaggagctatt
cagctctgcttagaatgccagaaagccgccagcaccttcaaacactacagttgtataagt
gagttaaattcaaaactgcaagataccttggaacaaatagaggaacaattggacgtagcg
ctttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcactcaagcc
attcacaacaccgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaaatttcagaagttacagtacaaagacctctgtacacacattacatcagacagc
tacattccatgcctggctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacaatgcagtggcatgagaaccatgaccaagatgaggcagcagttgtgtcttctgtt
tcagatggcaacaatgtgatgggaactgaagagaactgttttgaccgcaactatgtgaaa
aagaagttagaacatgggctttcacgaatatggcaggatgttcaattgaaagtgaaaaca
tatcttctgggaacggatctgtctaacttcaaatatgacgacttcatatttgtacttgat
gttatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactatttcaaaacgtaccacagaacccgtctt
gaagaactaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattctgcagcttcatgaatttaagttcatggagcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatttcagcaacactgacgttatttgagcagtac
tgtaatggaggaaacccatttgaaattcaggctgacagcaaagatgatgagacagaggac
gtgctagcttccaatgggtatgaatcagatgaacaagaaaaaagtgcatatcaagaatat
gatagtgacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacagga
gatgccccgataaaaagtgtttctcgagaaactctgaggagcagaaagagatcagattac
aacctcaacaaagtgaacgcacctattctaacaaacactaccctgaatgtaatacggctt
gttgggaaatacatgcagatgatgaatattctgaaacctattgcatttgatgtgatccac
ttcatgtcccagctcttcgattattatctgtatgcagtctatacgttttttggccgaaat
gacacgtttgagtcagcaggactgggccttagtagcagcagattacgcaccacactgaac
agaatccaagagagtctgattgatctggaggtctctgctgatccttcaggaactctcaca
gctgctgaagagagaaaagagaaggtgccaagcccacatctcagtcatctcgtagttttg
acatctggcaattcactctatggtttggcagagagagtggtggccacagaatccttggta
tttctggctgagcagtttgaatttcttcagcctcatcttgacgcagtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgt
aaaccagtttattggattgttgctgctaaagccattgattatgaacaaatgctacttctc
atggctaatgtgaaatgggatgtgaaggaaatcatgtcacagcacaatgtatatgtagat
gctcttttaaaggaatttgaagaatttaacagaaggttgaatgaagtgtctaagagagtc
cgtattccactgccagtctccaacatcctttgggaacactgcatacgcttggccaataga
actcttgtggaaggttatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatg
caactggactttcagcagttcctaatgaaactagaaaagttaacagacattaggcctatt
ccagataaagaatttgtggagacctacattaaagcatactacctaacagaaaatgacatg
gaacgctggataaaagaacatagggagtattccactaagcagttgaccaatctggtgaat
gtttgtctgggctcccacatcaacaaaaaggcaagacagaagctgttagctgccattgac
gacatagacaggcctaaaagataa
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