Empidonax traillii (willow flycatcher): 114062427
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Entry
114062427 CDS
T05887
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114062427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114062427
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114062427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
114062427
NCBI-ProteinID:
XP_027749608
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MATELEPPAAGAVSGAAPLEAEEDEEHWLYGDDTTGKQEDGPISGHAESAHPLQDAPQES
RPVNSEDREMSQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTG
RGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEE
TWKAYCEKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVG
GRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQ
PQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPI
PGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTV
DKGTSSSSSSHWEYSGSRRDRERDRERDRERERDRDRDRTPTTSEYNNDDERYRYYSRER
SYDFERDYRRSRDRSREREDRHRERRHRDKDESSKHKSSRRKQHESEEGESHRRHKHKKN
KRSKEEKEASEDGAQEGEEQDTKE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccgccggccgccggcgccgtgtcgggcgcggcgccgctggag
gcggaggaggacgaggagcactggctgtacggggatgacaccactggtaagcaagaagat
ggaccaatttctggccatgcagaatctgctcaccccctgcaggatgctccccaggagagc
cggcccgtcaacagcgaggaccgggagatgtcacagcacgccctgcccagcggggaggat
gatgaagatgacagcgacagcgacagtgatgatgacgatgtcaaagtgaccattggcaac
atcaaaacgggagcaccgtcctacatgggaactcccatgaacctaaacctgaaaacgggg
agaggctacggagcatctgcctcagccaagttgcagcccaaaggtattgacttggatgcc
gcagggaatataaatggattgcctgttatagaagtggatttggattcatttgaagacaag
ccgtggaggaaaccaggtgctgatctctctgattactttaattatggattcaatgaagag
acgtggaaggcttattgtgagaagcagcggcggctgcagctggggctggaccctgctccc
cccatcagcactgagaacaagatcacggttcagcaggggaggacaggaaatgctgaaaaa
gaggtggaaaacaacatcatcaaaacagagttcaaaacagactttctggctctggtggga
ggaaggatgaaggctgggcctcctcccaacaggaagctgggcgggaccatcgatgtgatc
gggggccaggcaggcaccattcgcagggtggagggaaggcgtcgagacaagcacgcctcg
gaggagaaccccatccaggtccttggagaccacgggagcaaaccacagcctccccagcag
ccccagcagccatcccagccccagcagcctcctcagcagcagccgttcgctccaccagca
gggcctccgcctcccccgctcgctgggcctcctccaccacacttcctgcaccctcctcct
ccagtcacctctgttccacctcccctgcaccctccaggcctgccacctccaggtcccatt
ccagggctgttcccgccacccctggcaccgccaccagctcttctcatcccaaccctggat
ggccagccagccagctacaacaacaggcagccacctccctttggctacaactccgcagat
tcaggtttcatcagctacccacccatctccacgtcccacacgccctgggtgaccacggtg
gacaagggcacgagcagctccagcagcagccactgggagtactcgggctccaggcgggac
agggagcgggaccgggagcgggaccgggagagggagcgagaccgggaccgggaccgcacc
cccaccaccagtgaatacaacaatgacgacgagcggtaccgctactacagccgggagcgc
agctacgacttcgagcgcgactatcggcggagccgcgaccgcagccgcgagagggaggac
cggcaccgcgagcgccgccaccgcgacaaggacgagagctccaagcacaaatcctcccgc
cggaagcagcacgagagcgaggagggggagagtcaccggcgccacaagcacaaaaagaac
aagcggagcaaggaggagaaggaggccagcgaggacggggcccaggagggagaggagcag
gacaccaaggagtga
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