Empidonax traillii (willow flycatcher): 114062560 Help Entry 114062560         CDS       T05887                                  Symbol POLQ Name (RefSeq) DNA polymerase theta isoform X1   KO K02349   DNA polymerase theta [EC:2.7.7.7] Organism etl  Empidonax traillii (willow flycatcher) Brite KEGG Orthology (KO) [BR:etl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:etl03400]     114062560 (POLQ) Enzymes [BR:etl01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      114062560 (POLQ) DNA repair and recombination proteins [BR:etl03400]  Eukaryotic type   Other factors with a suspected DNA repair function    DNA polymerases     114062560 (POLQ) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 HHH_5 Helicase_dom4_arc Motif Other DBs NCBI-GeneID:  114062560 NCBI-ProteinID:  XP_027749930 LinkDB All DBs Position Unknown AA seq 2519 aa AA seqDB search MFEWQAECLMLGQVLEGRNLVYSAPTSAGKTLVAELLILKRVLETRKKALLILPFVSVAK EKKCYLQSLFQEVDVTVGGYMGSMSPAGRFSALDVAVCTIEKANGLINRLIEENKMDSLG VVVVDELHMLGDSHRGYLLELLLTKVRYVTEKVAKREVKTTSPGFGGIQIVGMSATLPNL GLLASWLDAELYCTDFRPVPLKEWVKIGSNIYDSSMNLVREFQPMLQLKGDEDHVVSLCY ETVCGGHSVLLFCPSKNWCEKLADIIAREFYGLQQAEGSVKNSALAPVVVDREGIDEVLD QLKRSVSGLDSVLQRTLPWGVAFHHAGLTFDERDIIEGAFRQGLIRVLAATSTLSSGVNL PARRVIIRTPVFGGKLLDILTYKQMAGRAGRKGVDTEGESILVCKPSERSKGTALLQGSL KPVCSCLLRREGQGVASSMKRAILEIIVGGVANTPDDVQTYASCTLLASSLKESKWENGK EQDKAQAGPIEACVAWLLENEFIQILDSGSDVKAKVYHPTHLGSATLSSSLSPTEAMEIF ADLQRAMKSFVLENDLHIVYLVTPVYEEWTTIDWYQFFCLWEKLPASMKRVAELVGIEEG FLARSVRGKIIAKTEKQHRQMAIHKRFFTSLALLDLISEVPLKDMTKKYGCSRGQLQSLQ QSAATYAGMITVFCNRLGWHNMELLLSQFQSRLTFGVHRELCDLVRVSLLNAQRARTLYN AGFVTMADLAKASPDDVATALKNSVPFKSVRRAVDEDEESAEERRTVRSIWMAGMKGLTE REAASVIVEEARRLLKEDLALMGVQWNPESFLETDTSSMISSESELEDRLHRSDGEESAE SSRVLNKKGCRVQHCNGLGLQTGNLSNIKKGYKRRLSSSTENSRCEKEVPGKKKARAEEG RGDIVCSAKKWPNTCTGNENREGISLVKTKTDSRTAIPEHLTEQGKTPTLRTKSSASRLI KSTEMHLNRTRNKNTSSKLQGSVLGDSNVRSIDIQNLPAFHPTASTDNFFSYRNRKDFME TNSATHEVSNSVQMDRIKIVRKDKMEGLFTEPTTSNQGMPKGRAHLQAPVMVQGTPHTSV EIHNIVGRRVIPDARTQRSENTDYKQNKISKTQTAVSCAEVRTDRQEMALGIDQGNVTAS CSGSGHVHCDSRIQKPVCFCPSENKICNTQIQNGGKHGSEKPNGILQAGTLQKDNSHLEV FLKEFPVKSGGVCNADGVQSGPASDLFSDSRDFEDSFPLDTQTEMIIKQERAAGITGQQG IEGSELAAIPQQEISKNLSSLWTENATDERVAATVRKLSLSSLITTNDITKNTTQHCSNK VLESGGLNLQPIVKEIESAPCLKESDFSVTDSQLHSFLQDYQTQNSVKGESVSKDLNKAT SHFGREHIVQVECHPVPETSLNMSDSLLFDDSFSNVADLSAVHIMEADRKDPAEKQEALL PPDGLLQNLRPVQNKFDVSGNQQEHENPAQCNNVSLAFSDIIAEALGHGNSPSFLKDLPS TFQGQSGLINPVTYNNDPRQKDLVGDQGEKLQRSQQTLDKKPHPVVWTDCSFELSPGLQD VLDKWPSPSSIEPVSVSSSLKGKLVSPIVNQEPDPAFESDCCKPEPLPTCQDLKSSFKVK ENKIENLHLQKTNGITLQLKGSNRTSCPPSDSNNGFIPPTPPKELFPKNSFSLSVKSARK RQVTCKNEGQMIQAQQNGEGNAEQQVKTLQVNTESQDPTETDEIKDDSTIDQGFSLQLSQ DVSPLVPLSAESFTIIDVASNKELFQTFVAEWKEKSRFSISVACERMKCLLSPKSTIGGK FKKVSSPQQMQVKDDGFPIQGCEDILVVGLAVCWGGKDAYYISLQQIQEQTEISMSLAPP PLDKSLSVTERLHHLQLYLQKKPKQERSLIMYDFIQHYKTLLMACGISLEGSFEDPKVAC WLLDSGSKERTLHNMVTNFLPNELPLLEAVGTGQGVQSLGLSASREHSGRYRAAIESVLV FSVMDQLHSELRKENLTDVFSKVEMPTHYCLALLELNGIGFSTTAYEAQKQVMQAKLCEI ETKAYQLAGHSFSLTSPDDIAEVLFLELKLPQNGDVKVQGNKKTLGYTRRATAKGNRIRL SKQLSTTKDVLEKLKTLHPLPGLILEWRRINNAITKVVFPLQREKQLNSALGMERIYPVA QTHTATGRITFIEPNIQNVPRDFEIEMPTVVEESPPSQGRGNVNSRGVLGARCRKRSSIL PNGLKFQAADRSEEKGMPFSVSLRHAFVPFPGGLILAADYSQLELRILAHLSCDCRLIQA LNSGTDVFKSIAAEWKMIDPEAVGDRTRQQAKQICYGIIYGIGAKSLGEQMGIDENEAAI YIESFKSRYTGVQKFLRETVRSCRRDGFVQTILGRRRYLPAIKDPNPYSKAHAERQAVNT TVQGSAADIVKTATVNIQRRLEAFSSVIKSHGHLENSFQRDKTGMLSRKRNVGMLRPISG AFFVLQLHDELLYEVAEDDVIQVAQIVKHEMENAVKLSVKLNVKVKIGPSWGDLRDLDL NT seq 7560 nt NT seq  +upstreamnt  +downstreamnt atgtttgaatggcaagcagaatgcctaatgcttggacaagttctggaagggaggaaccta gtttactcagctcctaccagtgctggaaagactcttgttgcagaattgcttattttgaag cgagtcctggagactcgtaagaaagctcttctcatccttccctttgtttctgtggccaag gagaagaaatgttatcttcagtccctgtttcaggaggtggatgtgacagttggaggctac atgggaagcatgtctcctgctggacgtttctctgctctggatgttgctgtctgcaccatt gagaaagccaacggactcatcaataggctaatagaagaaaacaaaatggactcactggga gtggtggttgtggacgagttgcacatgctgggagactcccatcgaggatatctgctggaa ctcctcctgaccaaagttagatatgttacagagaaggtagcaaaacgagaggtgaagacg accagtcctggttttggtgggatacagatagtaggcatgagtgctaccctccctaatttg ggactcctagcctcatggttagatgcagagctatactgtacagattttcgtcctgtgccc ctcaaggagtgggtgaaaattggcagcaacatatatgactcctccatgaatttagtgcga gaattccagcccatgcttcaactgaagggagacgaagaccatgttgtgagcctgtgttat gagactgtttgtggtggccattcagtcctgcttttctgtccatccaagaactggtgtgag aagctggcagacatcattgccagggagttctacggtttgcaacaagctgagggttctgtg aaaaactcagccctggccccggttgttgtggacagagaagggatcgatgaggttctggat cagctaaagcgttctgtctcaggtctggattctgtgctccagcgtactttgccatgggga gtggcatttcatcatgcaggtcttacttttgatgaacgagacattattgaaggagccttt cgccaaggcttgatcagagttctggcagcgacctccacgctctcatctggagtgaatttg cctgcgcgccgagtaattatacgaacacccgtgtttggtggcaaactgctggacattctc acttacaagcagatggctggaagggctggcaggaaaggggtagacacagagggtgagagc attttggtttgcaagccctcggaaagatcaaaaggaactgctctacttcagggatctctc aagcctgtttgtagctgtttgcttagaagagaagggcaaggtgttgcttctagcatgaaa agagcaatacttgagatcatagtggggggagtggccaacactccagatgatgtgcagacc tatgcttcttgcactctgcttgcatccagcttgaaagaaagcaagtgggaaaatgggaaa gaacaagacaaagcacaggctggacctatcgaggcttgtgtggcatggctgctggaaaat gaattcattcagattctggactctggcagtgatgtgaaagcaaaggtttatcacccaaca catcttggctcagctactctttcctcttctctttcaccgaccgaagccatggaaatcttt gctgacctgcagcgagctatgaaaagctttgttctggagaatgatctgcatattgtctat ttggtcaccccagtgtatgaggagtggaccacaattgattggtaccagtttttctgcttg tgggagaagcttcctgcctcaatgaaacgtgtggctgagctggtggggattgaagaaggc tttctagctcgttctgttaggggcaaaatcatagctaaaacagagaaacagcacagacaa atggccatccacaaaaggtttttcaccagtcttgcccttctggatttaatcagtgaggtt cccttaaaggatatgaccaagaaatatggctgtagtcgtggccagcttcaatccttgcag caatctgctgccacttatgcaggaatgataacagttttctgtaatcgactgggctggcac aacatggagctgttgctctctcagttccagagccgcctcacttttggggttcatagggag ctttgtgacctggtacgagtgtctctgctgaatgcacagcgtgccaggacactttacaat gctggctttgtcaccatggctgatcttgctaaagccagccctgatgatgtggcaactgct ctgaagaattcagtgccgttcaaaagcgttcgtagggctgtggatgaagatgaagaatcg gcagaggagcgtcggactgtgcgcagcatctggatggctggaatgaaaggcttaactgaa agagaagcagcttccgtcattgtagaggaagccaggagacttctgaaggaggatttggca ctgatgggagtgcagtggaacccagagtcttttttggagactgatacatcctctatgatc agcagtgagtcagaactggaagacagactgcataggtcagatggagaggagtctgctgag tcttcaagggtgttaaacaaaaaagggtgcagagttcagcattgtaatggccttggtttg cagactggaaacttatcaaatattaaaaaggggtataaaaggcggctaagtagtagcaca gaaaattccaggtgtgagaaggaagtcccaggcaagaaaaaggctcgagcagaggaaggc aggggtgatattgtgtgcagtgctaaaaaatggccaaatacatgcacaggtaatgaaaac agggaaggaatttctctggtcaaaaccaagacagattccaggacagccatcccagagcac cttactgaacaagggaaaacaccaacattgagaacaaagtcttcagcctctagattgatt aaaagcacagaaatgcatttaaaccggactaggaacaaaaatacctcttcaaaactgcag gggtcagttcttggagattcaaatgtacgtagcatagacatacaaaatctgcctgctttt caccccaccgcctctacagacaattttttttcataccgaaataggaaggactttatggaa acgaattctgcaactcatgaagtctcaaattctgtacagatggacagaataaagattgtg aggaaagataaaatggaaggattatttacagagcccaccactagtaatcaaggcatgcct aaggggagagcacatttgcaggcacctgttatggtgcagggtactccacacaccagtgtg gagatacataatattgtaggaaggcgagtcatacctgatgctaggacacagagaagtgaa aatactgattataagcagaataaaattagtaaaactcaaacagctgtgagctgtgctgag gtgaggacagataggcaggagatggctttaggcatagatcaaggtaatgtaactgctagc tgctctggaagtggacatgtccattgtgacagcaggatacagaagcctgtgtgtttttgt cctagtgagaataaaatctgcaatactcagattcagaatggtggcaaacatgggagtgaa aagcccaatggaatattacaagctggaacattacagaaagacaacagtcatctcgaggtt tttctgaaagagtttccagtaaaatccggaggtgtttgcaatgcagatggtgttcagagt ggtccagcctctgatctgttttctgactctagagactttgaagacagcttcccgttggat actcaaactgagatgataataaaacaggagagagcagctggaatcacaggacagcaggga atagaaggctcagagctggcagcaataccacagcaggaaatctccaaaaacctaagcagt ttatggactgagaatgctactgatgaaagggtggctgcaacagttaggaaactgagttta tcaagtcttatcacaacaaatgacattaccaaaaacacaactcagcactgcagtaataaa gttttggagtctggaggccttaatttacagcctatagtgaaggaaatagaatctgcacct tgccttaaagaaagcgatttctcagtaactgactcacagctacacagttttctacaagat taccagacccaaaattcagtaaaaggggaaagtgtgtctaaagaccttaataaagcaacc tcccattttggaagggaacacattgtacaagtggaatgccaccctgtccccgaaacaagc ctaaatatgagtgatagcttgctatttgatgatagcttcagtaatgtcgctgacctttca gctgttcacatcatggaagctgacagaaaggaccctgctgagaagcaagaggctttgctt cctccagatggtcttttgcagaatctaagacctgttcagaataaatttgatgtcagtggc aatcagcaagaacatgagaatcctgcacaatgtaacaatgtgtctctagcattctctgat ataatagctgaagctttaggtcatggaaattccccatcttttctgaaagatcttccttct acatttcagggtcagtcaggattaataaacccagtgacttataacaatgaccccagacag aaggatttagtaggagatcaaggtgaaaagctccagagaagccagcaaactttagataag aaaccccatccagtggtatggactgattgctcgtttgaactaagcccaggattgcaggat gtgttagacaaatggcctagtccctcaagcattgaaccagtttcagtaagttccagtttg aaaggaaagttagtttctcctattgttaatcaagaaccagatccagcttttgaatctgac tgttgtaagccagagcctttgcccacttgccaggatttaaaaagctctttcaaggttaaa gaaaacaaaatagaaaacttgcatcttcagaaaacaaatggcataacacttcagctcaag ggaagcaacagaacatcctgtcctccatcagatagtaataatgggtttattcctccaacg ccccccaaagagcttttcccaaagaattccttttctctttctgtgaaatctgcaagaaag aggcaagtcacctgcaagaatgaaggtcagatgattcaggcacagcagaatggggagggc aacgcagagcagcaggtaaaaacactccaggtcaatactgagagtcaagacccaactgag actgatgagataaaagatgattctactatagaccaaggcttttcactgcagctatctcag gatgtttctccacttgttcccttgagcgctgaaagtttcactattattgatgtcgcaagc aacaaagaacttttccagacttttgttgcagaatggaaggaaaaaagcagattctccatc tcagtggcatgcgaaagaatgaaatgtcttttgtctcccaaatcaacgattggtggcaaa ttcaaaaaagtgagttctcctcagcagatgcaagttaaagatgatggatttcccatccaa ggctgtgaagacatcttggtagttggactggcagtgtgctggggtggaaaagatgcctac tatatctctttgcagcagatacaagagcagactgaaatcagtatgagtttggcaccacca cctttggacaaaagcctgtctgtaacagagagactacatcatctgcagctgtatctgcag aagaagcctaagcaggagcggtcccttatcatgtatgacttcattcagcactacaaaact ctgctgatggcttgtggcatctccttggaaggaagttttgaggacccaaaggttgcatgt tggctgcttgattctggctctaaggaacgtacacttcacaacatggtgactaactttctc cccaacgagctgcctctactggaagcagtaggcactggccaaggagtgcagagcctgggg cttagtgccagcagagaacattctgggaggtacagagcagcaatagagtctgtgcttgtc ttcagtgtcatggaccaactccatagtgaactacggaaggaaaatctgacagatgtattt tctaaagtggagatgcccacccactattgcttagctcttctggagctgaatggcattggt tttagcacgacagcatacgaagcccagaaacaggtcatgcaagctaaactgtgcgagatc gagaccaaggcatatcagctggcaggacacagcttctccttgaccagccctgacgacatc gcagaggtgttgttcctggagctgaagttgccacaaaatggagatgtgaaggttcaaggg aacaagaaaactctgggttacaccagaagagcaactgctaaagggaacaggattagatta agcaagcagttgagtacaaccaaggatgttttggagaaattaaagacacttcacccattg ccagggctgatattggaatggaggaggatcaacaatgccattactaaagtggtgtttcca ctacagagggaaaagcaattgaattctgcactgggaatggaaaggatatatccagttgca cagactcatacagctacaggtcgaataaccttcatagagccaaatatccagaatgtgccg agagattttgagattgaaatgccaactgtggttgaagaaagcccaccctcccaaggccgt ggaaatgttaattctcgtggcgttttaggggccagatgtagaaaacgttccagtattttg cctaatgggctaaagttccaggctgcagacagatctgaagaaaagggaatgccgttttct gttagcctgaggcatgcttttgttcccttcccaggtggcttaatcttggctgccgattac tctcagcttgaactgaggatccttgctcatttgtcttgtgactgtcgactcattcaagcc ttgaacagtggtactgatgtctttaagagcattgcagcggaatggaaaatgattgatcct gaagctgttggagataggaccaggcaacaagctaagcagatttgctatgggatcatctac ggcataggagcaaaatccctaggcgagcagatggggattgatgaaaatgaagctgccatt tacattgaatccttcaaatcaagatacacaggggttcagaagttcttgagggagacagtg cggagctgccgaagagatggttttgtgcagaccatcctgggaagacggcgatacctgcca gctatcaaagatccaaatccctacagtaaagctcatgcagagcgacaggctgtgaataca actgttcagggatctgctgcagatattgtcaaaacagccactgtgaatattcagagacgc ctggaagctttctcctctgtgatcaagtcccatggacatctggagaactccttccagaga gataaaacaggaatgctgtcgagaaagagaaatgtggggatgttacgtcctatcagcgga gctttctttgtcctccaactgcacgatgagctcctctatgaagttgcagaggatgatgtc atccaggtcgctcagattgtgaagcacgagatggaaaatgccgtcaaactctcggtaaag ctgaatgttaaagtgaaaattggacctagctggggagacctgcgggacctggatctctga

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