Empidonax traillii (willow flycatcher): 114062597
Help
Entry
114062597 CDS
T05887
Name
(RefSeq) contactin-6-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etl04515
]
114062597
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
etl00537
]
114062597
Cell adhesion molecules [BR:
etl04515
]
Immunoglobulin superfamily
Contactins
114062597
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
etl00537
]
Others
114062597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Pur_ac_phosph_N
Sp38
Tissue_fac
C2-set_3
Motif
Other DBs
NCBI-GeneID:
114062597
NCBI-ProteinID:
XP_027750014
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MVLLWKLISLLPFMSCSTGEETLRGPIFIQEPHDITYSMGSANPELLLNCTAEGNPPPHY
RWKQNGTDIDLTMSYHYRLVGGSLAINNPHKNQDIGTYQCLATNSFGTILSRKAKLQFAY
LESFEARTRSTVSVREGQGVVLLCGPPPHHGGLSYTWIFNNHTLDLRGDGRRFVSQETGN
LYLAKVEPWDVGNYTCVVTNREAQQSARGPPTPLTLRSDGVMGEYEPKIEVRFPETTHAA
KGSAVRLECFALGNPVPSISWKRSDGNSLAKKIQPNKTKGVLEIPDAQQEDEGSYECIAG
NSRGINIARGQLFVYAPPEWDKKIQNAFLSLYDSLFWECKAKGKPSPSYSWLKNGQPLVS
EERIQIENGTLIIPMLNVSDSGLYQCVAENKYDTIYASAELRVMAAAPDFSKNPVKKMSV
VQVGGEVTIGCKPSASPRAVITWRKGSELLHPNKRVMFLEDGSLRLSNITRADAGVFTCV
ATNQFGVARNSGNLIVKERTVITIPPSDTDATVGESIVLPCQVSHDPSLAVAFTWSFNGQ
RIELSRGINHFERIGRESAGDLMIRNIQLHHSGKYVCMVQTTLDSQSAAADIIVRGPPGP
PEDVKVEHVSSTTAVLSWKPGVENNSPVQIYSVQTRTPFSVGWQAVSTAPEVINGRTHKA
TVVDLSPWVEYEFRVVASNSVGIGEPSRPSALLKTKAAVPVVAPTNISGGGGSRSELVIT
WEPVSEELQNGEGFGYIIMFRPLGSATWTKAAVASVESSKYVYRNESITPLSPFEVKVGV
YNDEGEGTLSSISIIYSGEDEPQIAPVGVSALSVSAAEVEVSWQPPAWNRHTGRVLGYEV
LYWTDDPKESTAGKARVSGNVTAKNITGLRANTLYFTTVRAYNTAGTGPSSPPVNVTTKK
SPPSQPPANIAWKLTNSKICLNWEHVKTMENESEVLGYKILYRQNRHSKTHILETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKISSLSSGAIKAAQRLNHILASGILLLS
SALIAPFP
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgctatggaaactaataagtctgctgccattcatgagctgcagcacaggggaa
gaaacccttcgtggtcctatttttatccaagagccacatgatatcacttattccatgggc
tcagcaaatccagagctcctgctgaactgcacagctgaaggaaatccacccccacactac
aggtggaagcaaaatggcacagatattgatcttaccatgagttatcactacaggttggtt
ggaggcagcttggcaatcaataacccacataaaaatcaggatattggaacataccagtgt
ttggccacaaattcatttggaacaattctgagcaggaaggccaagcttcaatttgcatat
ctggaaagctttgaagcaaggacaaggagcacggtgtcggtgagagaaggacaaggagtg
gtcctgctctgtgggcctcccccacaccatggaggcctgtcctacacgtggatcttcaac
aaccacaccttggaccttcggggggacggacgccgcttcgtctcccaggaaacggggaat
ctctacctggccaaggtggagccctgggatgtggggaattacacctgtgtggtgaccaac
agggaggcacagcagagtgccaggggacctcccacccccctcaccctccgcagcgatggt
gtgatgggggagtacgaaccaaagatcgaagttcgatttccagagacgacgcacgcggcg
aagggctcggctgtcagactggagtgctttgcccttggaaaccctgtcccgagtatcagc
tggaagaggtctgatggaaattccctggcaaagaaaatccaacccaacaaaaccaaagga
gttctcgaaatccccgatgctcagcaagaagatgaaggttcttatgagtgtattgcagga
aacagtcgaggaataaacattgcaagaggtcaattatttgtctacgcaccccctgaatgg
gataaaaaaatccaaaatgcctttctgtctctctatgacagtttattttgggaatgtaag
gcaaaaggaaaaccaagcccttcctacagttggttaaaaaatggccagcccctggtgtca
gaggagagaatccaaatagaaaatgggactcttatcatacctatgctgaatgtgtcagac
tctggcctctatcagtgcgtggcagaaaacaagtacgatacgatttatgccagcgctgag
ctgagggtgatggctgcagctcccgatttttccaaaaatcccgtgaaaaaaatgtcggtt
gttcaagtgggaggcgaagttaccatcggttgcaagcccagtgcttctcccagagctgtc
atcacctggagaaagggctcggagcttctgcaccccaacaaaagggtgatgttcctggag
gatggcagcctcaggctctccaacatcaccagggcagatgctggagtgttcacctgtgta
gcaacaaaccagtttggagtggccaggaattccgggaacctgattgtgaaagaaaggact
gtaatcactattccaccttctgacacggatgcaacagttggagagagcatagtcctcccc
tgccaggtgtcccacgacccctcccttgccgtggcgttcacgtggtcattcaacggccag
agaatcgagctgagcaggggaataaatcactttgaaaggattggaagagaatctgctggg
gatttgatgataagaaatattcagctccatcattctgggaaatatgtgtgcatggtgcaa
acaactctagacagtcaatctgcagcagcagatatcattgtgagaggccccccaggtcca
ccagaagatgttaaagttgaacatgtttctagcactactgctgtgttatcctggaagcct
ggagtagagaataacagcccagtccagatctacagcgtccagaccaggactccgttctcg
gtgggatggcaggcggtttccacagcccctgaagtcataaatggcaggactcacaaggcc
acggtggttgatttaagcccttgggttgagtacgagttccgtgtggtcgccagcaacagt
gttgggattggggagccaagcagaccatcagctctactgaaaaccaaagcagcagttcct
gtggtggcaccaacgaacatcagcggaggaggagggagccgctccgagctggtcatcaca
tgggagccagtttcggaggagctccagaatggggaaggttttggctacatcatcatgttc
cggcctctgggctctgccacctggacaaaagcagctgtggcttcggtggaatcaagcaaa
tatgtttataggaacgagagcatcacacctctgtctccttttgaagtgaaagttggtgtc
tacaatgatgagggagaagggaccctgagctccatatccatcatctactcaggagaagat
gagccgcagatcgctcccgtgggggtgtcagcgctgagcgtgtcggcggcggaggtggag
gtgtcctggcagcccccggcgtggaaccggcacacgggcagggtgctgggctacgaggtg
ctgtattggacggacgatcccaaggaaagcacggccgggaaagcgcgagtcagcgggaac
gtgacagccaaaaacatcacgggattaagagctaacaccttgtactttacaacagtcagg
gcctacaacactgcagggacagggccctccagccccccggtgaatgtcaccaccaaaaag
tcaccaccaagtcaacccccagcaaacattgcctggaagctcacaaattccaaaatctgc
ttgaactgggaacatgtgaagacaatggagaacgagtcagaggtgttgggctacaaaatt
ttgtatagacaaaacagacacagcaaaacacacatcctggagacaaacaacacttcagct
gaacttctggtcccttttgaagaagattatctcatagaaataaggacagtcagtgatggt
ggggatggcagcagcagcgaggaaatcaggatcccaaaaatatcaagtttaagctctgga
gcaataaaagcagcccaaaggctgaaccatatattggcatctgggatcctgctattgagt
tctgctcttattgccccttttccttga
DBGET
integrated database retrieval system