Empidonax traillii (willow flycatcher): 114062743
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Entry
114062743 CDS
T05887
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114062743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etl03021
]
114062743
03036 Chromosome and associated proteins [BR:
etl03036
]
114062743
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114062743
Coactivators
SAGA/TFTC/STAGA complex
114062743
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
114062743
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
114062743
NCBI-ProteinID:
XP_027750319
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKALSDLVGSLESQLAGGRGPAEPPAPRTSAPSQPPPPQQ
QGSLAGGSSPGRQQQQHGRPASPPAPGPGEAAGRPGTAGSRAPAAGPPPAPSPPAALAAA
GRAASVNSSSVQQSHGAAPAGGSPAAPAPPPPAAPAPPVNNHVAAGAGRDAGSPGPGPSP
PAADSAPGPAAGGGAPAGGGGAGGAAEGAAAAPAPRPGEAAPTGEGSGARPAAGPPASGA
APPPAALPAPAASASPAPAAPAPTAPAAPKPAGPAKPGAGAALPAAPQPVSPRPALGAAP
PRIVAPQLIVRPPPQTTIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQMQAQVQTQ
TQGPANLSPRLSVPTTGPVFRLSAAQQPTPVATSTVRLGLPVQAKVVQPPAAPASAAATL
PGGAVLAHTTISVATTSAQNLFKTTVATGTSASQQPAVLTGGQSQGPAQPQGQPRLPLPP
HTAAQVPAQPLVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVK
ALVQDLLDAKIDPEEFTGRLQTELKSSPQPYLVPFLKKSLPALRQSLLNSQHLVLQGQPS
QQPLQQSKLSQVIPQSASGSISSVVTTQTIGIRQPNNICTVSVSNTVQPPQVKVVQSNQS
SQLQIIQSTSAQTVKRTPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGGFGVQV
SANQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARIMASNSDLVGNQLQSCKDEPF
LAAVPLHKRILETAKKLGITDVPAEVVTFISHATQNRLRTVIEKVTVITQHRMESYKDDE
WYEQATDVRAQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQ
QQELAQMRQRDANLTALAAIGPRKKRKLDAPGLLSMGGEGLGVSGGSQAGLGTASPRQYP
RQKITRVNLRDFIFYMEQEREMSHSLLLYRALLK
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcgtcggaccccctggaagagatgctgctcttctccgaggaggtggat
gagaaggcgctcagcgacctggtgggatccctggaatcgcagctggcgggcggccgcggc
cccgccgagccgcccgcgcccaggacctccgccccgtcccagccgccgccgccgcagcag
caggggagcctggcggggggcagcagccccggccggcagcagcagcagcacggccgcccc
gcgtcccctcccgcgcccggccccggggaggcggcggggcgccccggcaccgcgggcagc
cgagcccccgccgcggggccgccgccggccccgtccccgccggcggcgctggcggcggcg
gggcgggcagcgagtgtaaacagtagtagtgtgcagcaatcacatggagcggcgcccgcc
ggcggcagccccgccgcgcccgccccgccgccgcccgccgcccctgccccgcctgtcaac
aaccatgtggctgccggcgccgggcgggacgcggggagccccggccccggccccagcccg
cccgccgccgacagcgcgcccgggcccgcggcgggcggcggggccccggcggggggcggc
ggggcggggggagcggccgagggcgccgccgctgcccccgcgccgcgccccggcgaggcg
gcgcccaccggggagggctcgggggcccgcccggccgcggggccgcccgccagcggggcc
gccccgccgcccgcagcgctgcccgcgcccgccgcctccgccagccccgcgcccgccgcg
ccggcccccacagcccccgccgcgcccaagcccgcggggcccgccaagcccggcgctggc
gctgccctgcccgccgccccccagcccgtgtccccgcggcccgcgctgggcgctgccccc
ccccgcatcgtggccccgcagctgatcgtgcggccccccccgcaaaccaccatccagctg
ccgcccggcttcaccatcccgcccgggatggtgctggtgcgcacggacgcgggacagctg
gtgatggtgccccagcaggctctagcccaggctcagatgcaggctcaggtgcagacacag
acacagggccctgccaacctgtcacccaggctttctgtgcccaccactggccctgttttt
cgcctgtcagcggctcagcagccgacgcccgtggccacgtccaccgtccgcctgggcctc
ccggtgcaggccaaggtggtgcagccgccggctgcgcccgccagcgccgctgccacgctg
ccagggggggctgtgctggcacacaccacgatatcagtagctacgacaagtgctcaaaat
ttgttcaagacaacagtagcaactggaacttcagcttctcagcagcctgcagtgctcact
ggtggacagagccaaggcccagcacagccccagggtcagccccggctgccgctgccacct
cacacggcagcacaagtgccagcacagcccctggtcatccccagctctcctgtgcctgga
accaccgttgtgtcccaggaaatgcaagagaatgtgaaaaaatgcaaaaactttttagct
acccttataaaacttgcttctcataattcaccgtctccagaaacgtcccgcaatgtgaaa
gctctggttcaagatttgttggatgcaaagattgatccagaagaatttacaggccgcctt
caaacagaactcaaatcatctcctcagccatatcttgtacctttccttaagaaaagtcta
cctgcattgagacaatctttactgaacagtcagcatttggttttgcaaggacagccgtct
cagcagccacttcaacaaagcaagctctcacaagtgatacctcagtctgcctcgggaagc
atctcctctgttgtcaccacacagacaataggaataaggcaaccaaacaacatttgcaca
gtctctgtatcaaatacagtgcagcctcctcaggttaaggtggtacagtcaaatcagagt
tctcaactgcagattatccagtcaacatctgctcaaactgtgaaacgaacccctgcttgc
cagactacccagattaggatgccagtggtaataactcagaccattagaccacaaggcaca
gtagggaaggcaccaacaatacaagccagtaaaagtcctgggggctttggtgttcaggtc
tctgcaaatcagaaaaacaagctgaatgaccctggaggtggttctttcagagacgacgat
gacatcaacgatgtcgcctctatggctggtgttaatctcaacgaagagagtgcccgaatc
atggccagcaactcggacttggtggggaaccagctgcagtcctgtaaggatgagcccttc
ctcgctgctgtccccctgcacaaacgcatccttgaaacggctaaaaaactaggaatcact
gatgtgccagctgaggtcgttacttttatttcccatgcaacacagaacagattgaggaca
gtgatagaaaaggtgacagtgatcacccagcaccggatggaatcatacaaagatgacgag
tggtatgaacaagctacagatgtccgagcacagctgaagttctttgagcagctggagcgt
ttggaaaagcaaaggaaagatgaacaagagagggaaatcttgttaaaggctgccaagagt
cgctcaaggcaagaagacccagagcaagctagactgaaacaaaaagcaaaggagatgcag
caacaagaactggcccagatgaggcagagggatgccaatctcacggcactggcagccatc
ggtccccgcaagaaacggaagctggatgcacctggactgctctccatgggaggggagggt
ctcggtgtgtctggtgggagtcaggctggcctgggcactgcttcccccaggcagtatcca
cggcagaaaataacacgtgtaaacctcagggacttcatcttctacatggaacaggaacga
gaaatgagccattctctcctgctctatcgagctctgcttaaataa
DBGET
integrated database retrieval system
