Empidonax traillii (willow flycatcher): 114062804
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Entry
114062804 CDS
T05887
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
etl01002
]
114062804 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114062804 (VCPIP1)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114062804 (VCPIP1)
Peptidases and inhibitors [BR:
etl01002
]
Cysteine peptidases
Family C64
114062804 (VCPIP1)
Ubiquitin system [BR:
etl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
114062804 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
114062804
NCBI-ProteinID:
XP_027750459
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MSQPQQPPPPPPPSPQQQPQPPPPAASKKRDRRIFSGTCPDPKCQARLFFPAHGPQGSGS
IECTDCGRRHEQRQLLAVEEVTDPDLVLHNLLRNALLGVSGAGPPRRNTELVKVMGLSNY
HCKLLAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETIGYGKDRS
GSLIYLHDTLEDIKKANNSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKKH
FEENLSHYKALFHDFIDAAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRPIIL
LDSLSGMRSSGDYSATFLPGLIPLEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAA
LPKLPRKLLPKAWGVPQDLIKKYIMLEEDGGCIIGGDRSLQDKYLMRLVAAMEEVFMSKH
GIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHRCLICGALSEHHVPPEWL
APGGKLYNLAKSTHGQLRPDKNYSFPLNSLVCSYNPTKDVLVPDYGLSNLTVCNWCHGNL
MRRVREDGSVSYIDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRE
TVYWFQYESDTSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTP
VNIDGAHAQRADDVQQGQELESQLPTKIILTGQKTKTLHKEELNMSKAERTIQQNIADQA
SVMQKRKSEKLKQEHKGQPRTASPGAVREGPSSAPATPTKTPYSPTSAKEKKIRITTNDG
RQSMLTLKCTTTFLELQEGIAREFNIPPYLQCIRYGFPPKELLPPKEGMENEPVPLQHGD
RIAIEILKGKEEGRQAASAHSAHAVKHEDIAVTSKISSKDLQEQVDKEMYSLCLLATLMG
EDVWSYAKGLPQLFQQGGVFYSIMKKTTGLADGKHCTFPHLPGKNFVYNAAEDRLELCVD
AAGHFPIGPDVEELVKEALSQVRAEATSRSREASPSHGMLKLGSGGVVKKKSEQLHNVTA
FQGKGHSLGTASSSQQHDQRARETPLLRKHSTETDFSPSAKIEPSVFTAASGNSELIRIA
PGVVTMRDSRQLDPTLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQSASVDVSQRKVEAV
SSTAKTGSFQAGLTESFSAPGGTEHLNTESTDGNMVNSVGTTFPARSKAQKGNSVEELEE
MDSQDAGITNATEPMDHS
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccccagcagccgccgccgccgccgccgccgtcccctcagcagcagccgcag
ccgccgcctccggccgcctccaagaagcgggaccggcgcatcttctcgggcacctgcccc
gaccccaaatgccaggcgcggctgttcttcccggcccacgggccgcagggcagcggcagc
atcgagtgcacggactgcgggcggcgccacgagcagcggcagctgctggccgtggaggag
gtgacggaccccgacctggtgctgcacaacctgctgcggaacgcgctgctgggcgtcagc
ggcgccggcccgccccgcaggaacaccgagctcgtcaaagtcatgggcctctccaactac
cactgcaagctcctggcccccatcctggcccgctacgggatggacaagcagactggcaaa
gccaaactcctcacggagatgaaccagggagacatctttgactgctccctcctgggcgac
cgcgccttcctcatcgagccggagcacgtcgaaaccatcggttatgggaaggaccgctcc
ggcagcctcatctacctgcacgacaccctggaagacatcaagaaggccaacaacagtcaa
gagtgcctcatccctgtccacgtggatggcgatggccactgccttgtccacgcagtctcg
cgggcgctggttggcagggaactgttctggcatgctctgcgagagaatctaaagaagcat
tttgaggagaatctgagtcactacaaggcacttttccatgactttatcgatgcggcagag
tgggaggacattatcaatgaatgtgaccctttgtttgttcctccagaaggtgtgccaatg
ggccttaggaatattcacatctttggtctggccaacgtgcttcatcggcctataatcctg
ttagactccttgagtggaatgcgaagctctggagattattcggcgacattcctccctggt
ctgatacccctggaaaaatgcatgggaaaagatggcatgctgaacaagccgatctgcatt
gcgtggagtagctcaggacgtaaccattatattcctctcgttggaataaaaggtgctgct
ttacctaagctgcctaggaagctacttcctaaagcctggggagttcctcaagacctcatc
aaaaagtacatcatgttagaggaggacggtggttgtatcattggaggagacagaagtttg
caggacaagtacctgatgaggcttgttgctgcgatggaggaggttttcatgagtaaacac
ggtatccaccccagtcttgtagctgatgtgcatcagtatttctacagaaggactggagta
ataggggtccagcctgaagaggtcactgcagctgccaaaaaagcagtgatggacaaccgc
cttcacaggtgcctcatctgcggggccctttcggagcatcacgttcccccagagtggctg
gctcccggggggaagctgtataacctggcaaaaagcacccatggccagctaaggcccgac
aaaaattacagttttcccctgaacagtttggtgtgttcttacaaccccacgaaggatgtg
ctggtaccagactatggcctgagcaatttgactgtttgtaactggtgtcacggtaactta
atgcgccgcgtcagagaggatgggtctgtttcatatatcgatggagacagaactaataca
aggtctacaggtggcaaatgtggctgtggattcaagcactactgggaaggtaaagaatat
gacaatctgcctgaagcttttcctattactctagagtggggtggaagagtagtgagagag
acggtctactggttccaatacgaaagcgacacatctctgaacagcaatgtgtatgatgtc
gccatgaaacttgttaccaagcacttccctggtgaatttggtagtgagattcttgttcag
aaagttgtcaacacaatattgcatcaaactgccaaaaagaaccccgatgactatacccct
gtaaatatcgatggtgctcatgcccaaagagctgatgatgtacagcaaggacaagagtta
gagtcgcaacttccaaccaaaattattttgactggacagaagacaaaaactttgcacaag
gaggagctgaatatgagcaaagctgaaagaactattcagcagaacattgcggaccaagct
tccgtaatgcagaaacggaaaagtgagaaattgaaacaagagcataaagggcaacccagg
actgcttctcccggggctgttcgtgaggggccatcgtctgcacctgctacaccaaccaaa
accccatattctccaacatctgcaaaagaaaagaaaattcgaataaccaccaatgatggg
aggcagtcgatgcttaccctgaagtgcaccaccaccttcttggagctgcaggaaggcata
gcgagagaatttaatattcctccctatttgcaatgtattcgctatggctttcctccgaaa
gagcttctgcctcccaaagaaggcatggaaaacgagcccgttcctttgcagcatggtgac
aggattgccatagaaatcctgaagggtaaggaggaaggcaggcaggctgcctcagcacac
tcggcccatgctgtgaagcatgaagacattgctgtgaccagtaaaatctcatcaaaggat
ctgcaagagcaagtggataaggagatgtattcgctctgtcttctggcaacactcatggga
gaagatgtttggtcttacgcaaaggggcttcctcagttgtttcagcagggtggagtattc
tacagcataatgaagaaaacaacaggtttggctgatggcaagcactgcactttcccacat
ctgcctggtaaaaactttgtgtacaatgcagcagaagacagattagagctgtgtgtggat
gctgctgggcactttccaatcggtcctgacgttgaagagctggttaaagaggccttaagt
caagtgcgagctgaagctacttcaagaagcagggaagcgagtccttcacacgggatgctg
aagctgggtagtggtggagtagtgaaaaagaaatctgaacaactacataatgtaactgca
tttcaaggaaagggccattccctaggaactgcatctagtagtcaacaacacgatcaaaga
gccagggaaacaccacttttaagaaagcatagcacagaaacggacttcagtccttctgct
aaaattgagccttctgtattcacagctgcttctggtaacagtgagcttatccgaattgct
ccgggagttgtgacaatgagagacagcaggcagcttgaccccactctgattgaggcacag
agaaaaaagttgcaggaaatggtctcttctattcaggcttcaatggatagacatttgcgg
gatcagaatacagagcagtcagcatcagttgatgtatctcaaaggaaagtagaggcagtg
agttcaactgctaaaactgggagctttcaggctggtttaaccgaatcattttctgcacca
ggtggtactgaacacttgaataccgaatcaactgatggtaacatggtgaattctgtggga
acaacattccctgcaaggtctaaagcacaaaagggaaattctgttgaggagcttgaggag
atggatagtcaagatgcaggaatcactaatgcaactgagccaatggatcactcttga
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integrated database retrieval system
