Empidonax traillii (willow flycatcher): 114062855
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Entry
114062855 CDS
T05887
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20 isoform X1
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl00531
Glycosaminoglycan degradation
etl01100
Metabolic pathways
etl04142
Lysosome
Module
etl_M00076
Dermatan sulfate degradation
etl_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
114062855 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
114062855 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
etl02042
]
114062855 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
etl00536
]
114062855 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
etl00537
]
114062855 (SPAM1)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
114062855 (SPAM1)
Bacterial toxins [BR:
etl02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
114062855 (SPAM1)
Glycosaminoglycan binding proteins [BR:
etl00536
]
Heparan sulfate / Heparin
Enzymes
114062855 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
etl00537
]
Enzymes
114062855 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
114062855
NCBI-ProteinID:
XP_027750542
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
METLRQIQSFGICVTRTYPVALGVVFTALLVSCCSSLTIRARPLVPNSPFLSIWNAPTEL
CTERTGVQLDMNFFPFIGSTLKTSIGQNITLFYPDRLGYYPYKNEVTGEAFNGGLPQLSP
LENHLKKAKEDIQFYIPSDEQLGLAVIDWENWRPVWIRNWGSKDIYRQESIELVQQRDLS
LSEADARTIAKMEFEAAAKSFMLETLKLGIEMKPNRLWGYYLYPDCYNYDYKQNPHNYTG
TCLDIEIERNNELNWLWKESTALYPSVYLETALRSSRNAQLFVRNRVQEAIRTSYVSNST
HPLPVFVYTRPVFTDVYEEYLSEDDLVNTIGESAALGASGIVMWGDMNLTQNKNTCRILD
NYLRRTLTPYLINVTMAARICSQVLCQDSGACARKKWNSNDYLHLNSENIVIQMTKDGKY
TLRGQPSFQDLQTLIEKFDCHCYAGQSCEPRADINDIHYLHACISEDICIQISSNSFSNI
EASEEKILSNITAFSFPSESKVTLSTHPEIEDFQSTIGNNTLNITTAKYNTVTAASRYDL
EANDTRTFSSSSSYKIKMFNLVCLIVLLRTLILMTHESENILLPGYV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctaagacaaatacaaagctttggcatctgtgttacccgtacgtatcccgta
gcattgggtgtggtgttcactgctcttctagtttcttgctgctcatctctgaccataaga
gctcgtccacttgttcctaattcaccttttctttctatctggaatgctcctacagaactt
tgtactgaaaggacaggagtgcagctggacatgaatttttttcctttcattggaagcacg
ctgaagacatccatcgggcaaaatatcacacttttctatccagacaggcttggctactac
ccttacaaaaatgaagtcacgggagaggcattcaatggaggactccctcaactctcgccg
ctggagaatcatttaaaaaaagccaaagaggacatccagttctacattccttcggatgaa
cagcttggattggctgtcattgactgggaaaactggagacctgtgtggataaggaactgg
ggatcaaaagacatttatagacaggaatccattgaactggttcagcagagagacctcagt
ctatctgaagctgatgccagaactatagctaaaatggaatttgaagctgcagcaaaatca
ttcatgttggaaactttgaagctgggcatagaaatgaagccaaatcgtctgtggggatat
tacctttatccagactgttataactacgattacaaacaaaacccacataattatacagga
acctgtttagatattgaaatagaaagaaataatgagcttaattggttatggaaggaaagc
acagcactttatccatctgtctatctagagacagctttaagatcctccagaaatgcccag
ctctttgttcgcaacagagttcaagaagccattagaacttcctatgtctctaattctact
catcctcttccagtttttgtatatacacgtccagtattcacagatgtctatgaggaatat
ctctctgaggatgacctggtaaataccattggagaatctgctgcactgggtgcttctgga
attgtgatgtggggtgatatgaatttaacacaaaataagaatacctgtagaattctggac
aactacctcagaaggactttgaccccatacctcatcaacgtcacaatggcagccagaatc
tgtagccaagtgttatgccaggactctggtgcttgtgcacggaaaaaatggaattccaat
gactatcttcacttgaactctgagaatattgtaatccaaatgacaaaggatgggaaatac
actctacgagggcaaccatcatttcaggatctgcaaacattgatagaaaaatttgattgc
cactgttatgcagggcaaagctgtgaacctagagctgatataaatgacatccattacctc
catgcttgcatttcagaagatatttgcattcagatatcctcaaattccttttctaacata
gaggcctctgaagaaaagatcctgtctaacataactgcattttcatttccctctgagagt
aaggtgacattatctacacatcctgaaatagaagatttccaatctaccattggaaataat
acacttaatataacaactgcaaaatataacactgtcacagctgccagtagatacgattta
gaagcaaatgatactcgcactttcagtagctcttcgtcctataagataaaaatgtttaat
ttggtttgcttaattgtacttttgagaaccttaatactaatgacccatgaaagtgagaat
attcttctccctggctatgtttga
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