Empidonax traillii (willow flycatcher): 114062904
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Entry
114062904 CDS
T05887
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114062904 (SMC4)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
114062904 (SMC4)
Condensin II
114062904 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
CCDC39
DUF2730
AAA_29
SPC25_N
HH_AprE
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
114062904
NCBI-ProteinID:
XP_027750636
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MASKSTKTSTAARGKGREPLDESCSDMEVEKEGNKQLDKGAPQAVSEEVVDTRSLEEILG
SIPPPPPPAMTNEPGAPRLMITHVVNQNFKSYAGEKILGPFHKRFSCIVGPNGSGKSNII
DSLLFVFGYRAQKIRSKKLSVLIHNSDEHTDIPSCTVEVHFQKIIDKEGDDYEVVPDSKF
YVSRTAYRDNSSVYHINGKKKTYKDVGILLRSHGIDLDHNRFLILQGEVEQISLMKPKGQ
TEHDEGMLEYLEDIIGSGRLKEPIHTLCRRVEMLNELRGQKLNRVKMVEKEKDALEEDKN
QAIEFLCLENKIFKEKNHIYQYYIHDLKKRIKDLEMQKAKINEETKSINEKSSKLAEETK
TKNKALKELEKKFNKITKFIEENKEKFNQLDLQDVRVRENLKHAKGKMKKLEKQLQKDKE
KVEELKKVPSTSTKTIEEAKAKKELLEKAKEKEEAKLQQVLASLQDETKEIRKEKEAKEQ
ELMEFSKEVTEARSNVELTQSELEIHLSRYNTALAQLSQAQEALRSTSDTLRDRKAAIKD
ISGKLPRAEQQLKEKELALEKLGREELGVKDLVRNLRRKVEEAKSSLAQSRSRGKVLEAL
LQQKKAGNIPGLYGRLGDLGAIDDKYDVAISSACGALDHIVVDTIDTAQACVNFLKAGRV
GVATFIALDKMTVWEKKIGKIPTPENTPRLFDLVKVEDQKVRLAFYFALRDTLVAKNLDE
ATRVAFQRDKRWRVVTLQGQIIEMSGTMSGGGKVLKGRMGSSVVTDVSEEEVNQMEAQLQ
KDCKRAMQCEEEKSQLEEAIRKLQQEIREMRNTSEKYTASIQSFAEQETHLKNQVKELEA
NVVAAAPDKNKQQQLEKALQDYQKDYEQLAEKAKEMGNKVKELQNLIMETTNHKVKAQQD
RIDKIDKEIDECSSAITKAQVAARTADRNLQKSEEALQRTQKEMEENEKDIKNLTAELST
LEDKATEVMNDYKQAEEALPAVQEEKKNLLQEIEKIRNEEHELQSEALNIKLKIEQVDSH
ISAHQGKVKHWQKEISTLSLHSIDNRPPEELPVLGEEELEALQDPSVVTKRIALLEAQRH
EMKPNLTAIAEYRKKEDLYLKHVAELDDITTERDNFRQAFEDLRKQRLNEFMAGFNLITN
KLKENYQMLTLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKKIFNLSGGEKTLSSLALV
FALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIG
IYKTMNTTKSTATNPKAISLKGLAELAALEGGAQSQGGPTALPSAAL
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaagagcaccaaaacctccacagcagcccgtgggaagggcagggagcccttg
gacgagtcctgcagtgacatggaagtggaaaaggaaggcaacaagcagcttgacaaaggt
gctcctcaagcagtgtcagaggaggtggtggatactcgaagtttagaagagattttgggt
agcatccctcctcccccacctccagcaatgaccaatgaacccggtgctcctcggctcatg
ataactcacgttgtaaaccagaacttcaaatcctatgcaggggagaaaattctgggacct
tttcataagcgtttctcgtgtattgtcggcccgaacggcagtggcaaatccaacatcatt
gactccctgctttttgtcttcggctaccgagcccaaaaaatccgctccaaaaagctgtcg
gtgctgatccacaactcggacgagcacacggacatcccgagctgcacggtggaggttcac
ttccaaaagatcattgacaaggaaggggatgattatgaagtcgttcctgacagcaaattc
tatgtgtctcgaactgcctatagagacaactcctctgtctaccacatcaacggcaagaaa
aagacttacaaagatgttggaattctgctccggagccacggcatcgacctggatcataac
aggttcttaattttacagggggaagtggaacagatctcgctgatgaagcccaaggggcag
acggagcacgacgagggaatgctggaatatctggaggatatcatcggctctgggaggctg
aaggagcccatccacaccctgtgccgcagggtggagatgctcaatgagctcaggggacag
aagttaaatcgagttaaaatggtggagaaagaaaaggatgccttggaagaggacaagaat
caagccattgagttcctgtgtttggaaaacaagatatttaaagagaaaaatcatatctat
cagtactatatccatgacctaaagaaacgaataaaggatctggaaatgcagaaagcaaag
attaatgaagaaacaaaaagcatcaatgagaaaagcagtaaacttgcagaggaaaccaaa
accaaaaataaagctctgaaagaacttgaaaagaaattcaataaaattacaaagttcata
gaggaaaataaagaaaaatttaatcagttggatttgcaggatgtgagagtgagggaaaat
ctaaaacatgccaaaggcaagatgaaaaaactggagaagcagcttcaaaaggacaaagaa
aaggtagaagagctgaagaaagtcccttccacgagcaccaaaaccatcgaggaggcaaag
gcaaagaaggagctcctggaaaaggcaaaggagaaggaggaagccaaactgcagcaggtt
ctggccagccttcaggatgagacaaaggaaattcggaaggaaaaagaggccaaggagcag
gagctgatggagttcagcaaggaggtgaccgaggcccgttccaacgtggagctgacgcag
tcggagctggagatccacctgagcaggtacaacacggccttggcccagctcagccaggcc
caggaggccctgaggagcacctcggacaccctgagggacaggaaagctgccatcaaggac
atctctgggaaactgccccgggctgagcagcagctcaaggagaaagagctggctctggag
aagctgggacgggaggagctgggggtgaaggatctggtgcggaacctgcggcgaaaagtg
gaagaagccaaaagttctttagcccaaagtcgcagtcgaggaaaggtgctggaggctctg
ctgcagcagaagaaagctgggaatatccctggactttatggaagactgggagatctggga
gccatcgacgacaagtacgacgtggccatttcctcagcatgtggagccttggaccacatt
gttgtggacaccattgacactgcccaggcctgtgtgaacttcctgaaggcaggaagggtt
ggagttgccacctttatagccctggacaagatgactgtatgggaaaaaaaaataggaaaa
atcccaactcctgaaaataccccccggctgtttgacctggtgaaggtggaggaccagaag
gttcgcttggccttctacttcgccctgagggacaccctggtggccaaaaacttggatgaa
gccaccagagtggcattccaaagggataaaaggtggagagtggtgacgctgcagggacag
atcatcgagatgtcaggaacgatgagtgggggcgggaaggtcctgaagggcaggatggga
tcctctgtcgtcacggatgtctcagaagaagaggtcaatcagatggaggcccagctgcag
aaggattgtaagagagcaatgcagtgtgaggaggagaaatcccagctggaagaggccata
aggaaactgcagcaggagatccgggagatgaggaacacctcggagaagtacacggccagt
atccagagttttgctgagcaagaaactcatctaaaaaaccaagtcaaggaactggaagcg
aacgtcgtggctgccgctcccgacaaaaacaaacaacagcaactggaaaaagccctgcag
gattatcagaaagattatgagcagctggctgagaaagccaaggaaatgggaaataaagtg
aaagagctgcagaacctcatcatggagaccaccaaccataaagtgaaagcccagcaagac
aggattgacaagattgacaaagaaatagatgaatgttcctcagccatcaccaaggcccag
gtggcagccaggactgcagacaggaacctgcagaaatccgaggaggcccttcagcgcacg
cagaaggagatggaggagaacgagaaggacatcaaaaacctgacagcagagctgagcacg
ctggaggacaaagccacggaggtgatgaacgactacaagcaggctgaggaagctttgcca
gcagtgcaggaggagaagaagaatttgctccaggagattgaaaagattcggaacgaggaa
catgaacttcagagtgaagctctgaacatcaaactgaagattgaacaagttgacagtcac
atctctgcccaccagggaaaggttaaacactggcaaaaagagatctccacgctgtccctg
cactccattgacaacagaccccccgaggagctgccggtgctgggggaggaggagctggag
gcgctgcaggaccccagcgtggtcaccaagaggatcgcgctgctcgaggcccagaggcac
gagatgaaacccaacctgacggccattgctgagtacaggaagaaggaggacctgtacctg
aaacacgtggcagagctggacgacatcaccaccgagagggacaacttcagacaggccttt
gaagatctcaggaagcagaggctgaacgagttcatggcagggttcaatctcatcacaaac
aagctcaaggagaactaccagatgctcaccttgggaggggatgctgagctggagcttgtg
gacagtctggatcccttctccgagggaatcgtattcagcgttcggcctcccaagaagagc
tggaagaagatctttaacctgtctgggggggagaagacgctgagctctctggctctggta
ttcgcgctgcaccactacaaacccacccccctgtacttcatggacgagatcgacgccgcc
ctcgacttcaagaacgtctccatcgtggccttttacatctacgagcaaaccaagaacgcc
cagttcatcatcatctccctgcggaacaacatgtttgagatctcggacaggctcatcggc
atctacaagaccatgaacaccacgaagagcacggccaccaaccccaaagccatctccctg
aagggactggctgaactggctgccctggaggggggagcccagagccaggggggcccgact
gccctcccctctgctgctctttag
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