Empidonax traillii (willow flycatcher): 114062917
Help
Entry
114062917 CDS
T05887
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114062917 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114062917 (DHX36)
03012 Translation factors [BR:
etl03012
]
114062917 (DHX36)
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114062917 (DHX36)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114062917 (DHX36)
Translation factors [BR:
etl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114062917 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
AAA_22
HA2_N
AAA_19
nSTAND3
ATPase
NPHP3_N
AAA_14
AAA_23
PhoH
NACHT
Motif
Other DBs
NCBI-GeneID:
114062917
NCBI-ProteinID:
XP_027750659
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MSYEHRRDWGRGRGGDGGSGSGGPSAGGPGGRGGRGRHPSHLKGREIGLWYARKQGQKSR
DTDRQQRAVVRMDERREEQIVQLLNSVQAKNDKEQESMSWWSGDEDSPTEQPVKVKPDAE
KAPVRRRPALEKTSLDRDVEYLFEKNEQDTDLDEQLKEDLKKKRSDPRYVEMQRFREKLP
SYGMREELVNLINNNRVTVISGETGCGKTTQVTQFILDDHIERGKGSTCRIVCTQPRRIS
AISVAERVAAERAEACGSGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSI
SHIVLDEIHERNLQSDVLMSIIKDLLNIRLDLKVILMSATLNAEKFSEYFDHCPMIHIPG
FTFPVVEYLLEDVIEKLRYSPEGTERRPRWKRGFLQGHVSRPDKEEKEEIYRERWPEYLR
QLRGRYSASTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLL
MSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVID
GGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQL
PEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVTLAINHLMELNALDRQEELTP
LGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKEL
SKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLAA
GFVSSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGSVN
IHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTI
AVDEWIVFQSPARIAHLVKNLRQELDDLLQEKIEKPHPVDWDDRTCRDTAVLTAIIDLIT
TQENEGLRNYAPRFQGERCS
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcaccggcgggactggggccgcgggcgcggcggcgatggcggctcgggc
tccggcggcccctcggcgggcgggcccggcgggcgcggcgggcgcgggcggcacccgagc
cacctgaagggccgcgagatcgggctgtggtacgcgcggaaacagggccagaagagccgc
gacaccgaccggcagcagagagctgtcgtgcgcatggacgagcgcagggaagagcagatc
gtgcagctcctgaattccgtccaggccaagaacgacaaagagcaagaatccatgtcctgg
tggtccggggatgaggacagccctacagaacagcctgtgaaagtgaaaccagatgctgaa
aaagctcctgtaagacggagaccggccttggaaaaaacatccctggaccgggatgtggaa
tatctctttgaaaaaaatgagcaggatactgatttagatgagcagctgaaagaagactta
aagaagaagagatctgatcccagatatgttgaaatgcagaggttccgagagaagctcccc
tcctatggcatgagagaggagctcgtgaacctgatcaacaacaaccgcgtgactgtgatc
agtggggagaccggctgtgggaagaccacccaggtgacccagttcatcctggacgaccac
atcgagcgagggaagggctccacgtgcaggatcgtctgcacccagcccaggaggatcagt
gccatctccgtggctgagagggtggctgctgagagggcagaggcctgtggcagtggcaag
agcacgggctaccagatccgcctgcagagtcggttgcccaggaaacaaggctcgattttg
tactgtaccacgggaattgtcctgcagtggctccagtcagataagcacttgtccagcatc
agtcacatagtccttgatgaaatccatgaaagaaatcttcagtcagatgttttaatgagc
attattaaagatctcctaaatattcgactggatttgaaagtcatactcatgagtgctact
ctaaatgcagagaagttttctgagtactttgatcattgtccaatgattcacatccctggg
ttcactttcccggtggtggaatatctgctggaagacgtcattgagaagttgaggtacagc
cccgagggcacggagcggcggccgcgctggaagaggggtttcctgcagggccacgtgagc
cggcccgacaaggaggagaaggaggagatctaccgcgaacgatggcccgagtacctgcgg
cagctccggggcaggtactcagcaagcactattgatgccctggaaatgatggatgatgac
aaggtggaccttgacctcatagcagctctgatcagacacatcgtgctggaagaggaggac
ggtgcaattctggtgtttcttccgggctgggacaacatcagcactttgcacgatctcttg
atgtcacaggtcatgtttaagtcagataggtttattatcatacctttgcattcactgatg
cctactgttaaccagactcaggtgtttaagaagaccccaccaggagtaaggaaaatcgtg
attgcaaccaacattgcagagaccagcatcacaatcgatgacgtcgtgtttgttatagat
ggggggaagataaaggagacccactttgacacgcagaacaacatcagcacgatggcagca
gagtgggtgagcaaagccaacgccaagcagaggaagggccgggcaggaagagttcagcca
ggccactgttaccatctgtacaacgggctgcgtgccagccttctggatgattatcagtta
ccagagatcctgaggacgcctttggaggaactctgcttacaaatcaagatcctgaagctt
ggtggaatcgcctatttcctgagcaaactaatggacccgccgtctcgtgacgctgtcacg
ctggccataaaccatctcatggagctgaatgctctggacaggcaggaggagctgactccc
ctgggtgtccatcttgcacggctgccagtggagccgcacattgggaagatgatcctcttt
ggagccctgttctgctgcctggaccccgtgctcaccattgcagccagcctcagcttcaag
gacccctttgtcatccctctgggcaaagagaaagtcgcagatgcaagaagaaaggagctg
tcaaagaacacgaaaagcgaccacctgactgtggtgaatgctttcactggctgggaagag
acccggcgtcgtggcttcaggacggagaaagactattgctgggaatatttcctgtcctcc
aacaccctgcagatgctgcacaacatgaaagggcagtttgctgagcacctcctggcagcg
ggctttgtgagcagcagagaccccaaggatcccaaatcgaacaccaactcggataacgag
aagctgctcaaagctgtcatctgtgctggcctctatcccaaagtggcaaagatccggccc
agcttcagcaaaaagagaaaaatggtgaaagtttgcaccaagacagatggctcagttaat
attcatcccaaatccgttaatgtggaggaaaccgagttccattacaactggctcgtgtac
catctgaagatgaggaccagcagtatttacctgtatgattgtacagaggtgtctccgtac
tgcctgctgttcttcggaggggatatatccattcagaaggataaggaccaggacaccatc
gctgtggatgagtggattgttttccagtctccagcgagaatagcacacttggtgaagaat
ttaagacaagaactcgatgatcttctccaagaaaaaatagagaagcctcaccccgtggac
tgggacgacaggacgtgcagggacacggcggtgctgacggcgatcatagacttgatcacc
acgcaggagaacgaggggctccgcaactacgccccgcgcttccagggcgagcgctgcagc
tga
DBGET
integrated database retrieval system
