Empidonax traillii (willow flycatcher): 114062987
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Entry
114062987 CDS
T05887
Symbol
ZNFX1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
114062987 (ZNFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
SLFN-g3_helicase
ResIII
DEAD
PhoH
UvrD-helicase
AAA_22
nSTAND3
AAA_25
Motif
Other DBs
NCBI-GeneID:
114062987
NCBI-ProteinID:
XP_027750761
LinkDB
All DBs
Position
Unknown
AA seq
1886 aa
AA seq
DB search
MGFRTKQENEGRRKSYQLGQTHEGTRGPWNEQENHGGGRRYQDGQAHERARGPRNEQENE
GRGRRYQGGQAQEGARGLMNEWENEGSKRRMQPRENPHFSQHATPRGAQLREQPRQAKRI
GYKFLESLLEKDPSEVVITLASHSGLKELLSQTAMKPGFLQLICQVLRKACSSRMDRQSI
QQLLGVVKESNFLRICLPQYVSDMVTEVVPAVRQEYPVHISNIISLLQDLISTFPASSVQ
KVSILLTILPASINTLRASGVDITEETEKNLNKVQMLMQHLQEKKREGTLRADNCTFMQP
QIDGQEENYRTIAIYPTHNEVHGREKPFLRPNIVSGRYESTGTYLDTHFRLLREDFVRPL
REGILELLRSFEDRGLRQKKFDDIRIYLDTHIIAPRCASTGIVYKVQFDIKPLKFVQWRN
SKRLLYGSLVCMSKDRFETFLFATVSNRDAAELANGVVELCFDAQSQALLAEVQPSDSFL
MVETTAYFEAYRHVLEGLQEMQEEDVPFQRYIVECDAQVKEPAYLTKDTDYNLAPLVETS
DEEMCPDSLRSVRVLDPKQWLSVEALRLDESQMQALNLALTKELAIIQGPPGTGKTYVGL
KIVQALLTNEQVWQSTVQKRPILIVCYTNHALDQFLEGIYSFQKNGIVRVGGRSSSEVLQ
QFTLKELRKHCNFRLNLPGHLCRAYVNIIGEMAETEKELQAGAKQLECTTYGVLHERFLE
AYIEPQHWASLMKGMDDKEFYYSGSQHSMILEWLGLGVSVFTQNAEENIWAENPDGQQEG
EEEWEDEAEEDLLNIPEMADLIEDERMIEDEKAAKPWRRKEEEDHRAVHRLASVMLAMQL
EDQEEGTPQPLQEAMQWEMTPGQRRKMKQKMKVELRKQDAMTESEAKAIQDLWQLDLSSR
WRLYRLWLQTYRAFIRRRILRHEQQYQVAAERLKELKLQEDLCILKDAKIVGMTTTGAAK
YRQILQKVEPRIVIVEEAAEVLEAHTITTLSKACQHLILIGDHQQLQPSANVYDLAKNFS
LEISLFERLIKVDFPFVCLKYQHRMRPEIARLISPHIYQELENHPSVLNYENIKGVSSNL
FFVEHDFPEQEIQEGKSHQNPHEAQFVVELCKYFLYQDYQPSQITILTTYTGQLFCLRKL
MPAKIFTGVKVHVVDKYQGEENDIILLSLVRSNKEERIGFLQIPNRVCVALSRAKKGLYC
IGNMRMLGKVPLWSKIIHTLREKDHIGRSLMLCCQNHPETKTPVSTAADFSKVPEGGCSR
PCEFRLSCGHVCTRACHPYDMEHKEFRCLKPCQKVLCADGHRCPQLCYVPCGRCLVKVEK
TISKCGHKQMVPCSTPESEFTCLEKCQKTLNCGHKCSNSCGEQCTNQCPERVTATLKCGH
KQAVECWIARRQERQPEMAVKCSFKCSVTLACGHACSGSCYTCFEGRFHKACNKPCKRFL
ICSHKCQEPCTAECPPCEMKCENYCVHSKCNKKCGESCVPCAEPCEWQCQHYQCTRLCSE
PCNRPRCNVPCAKRLPCGHPCAGLCGEPCPNKCLVCNHEELTQIFFGFEDDPDARFVQLE
DCGHIFESQGFDHYMDKDDDAVKLKVCPLCQKPIRKNLRYGTSVKRQVDEIEQVKQKIQG
SAQEIESSRQRLKAALARNDVLKNNLQEKYLMLKGMLEASDLSTKRIGLIENQLNFYERI
AELTASVSKIAENERPGMRRRLGEVQAWLDKQRITFTEQELSDLQSEIQRLSYLLNLLAS
CNLSSRMISPVLAAKIARAREILEGAKKFTEEDEAAVKAHMEKIKADLPVAGLGISDAER
VQIVQAIACPRGHWFKCKNGHVYVIGECGGAMETSKCPECHEVIGGTNHTLDSTNSLASE
MDGATHAAWSDVANNMLNFEDLRRLI
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgggattcaggactaaacaagagaatgagggaaggagaaagagttaccaacttggacaa
acacatgaggggacaagaggaccctggaatgagcaagaaaatcatggcgggggaaggagg
tatcaagacggacaagcacatgagagggccaggggacctcggaatgagcaagaaaatgaa
ggcaggggaaggaggtatcaaggtggacaagctcaggaaggagctagagggctgatgaat
gaatgggaaaatgaagggagcaaaaggaggatgcaacctcgtgagaatcctcatttttcc
cagcacgctaccccacgtggtgcccaactccgtgagcagcctcggcaagccaaaaggatt
ggctataagttcctggaaagtctccttgagaaagacccctcagaagttgtcatcacgctt
gcttcccattcgggtttgaaggaacttctctcccaaacagctatgaaacccggcttcctt
cagctcatttgccaggtgcttcgaaaagcgtgcagttcccgaatggataggcagagtatc
caacagcttcttggagtggtgaaggagtccaactttctcaggatctgtctgccacagtat
gtgtctgacatggtaacagaagtagttcctgctgtacggcaagagtacccagtgcatatt
agcaacatcatttcacttcttcaggacctgatcagcaccttcccagccagctctgtgcag
aaagtctccattctcttgacaatcttgccagcatccataaacaccctgagagcttctggt
gtggacatcacagaagagacagagaagaacctcaataaagtccagatgctcatgcagcat
ctgcaggagaagaaacgtgaaggcacactgagggctgataactgtacatttatgcagcct
cagattgatggtcaagaagaaaactatcgtaccatagccatttatccaacacataatgag
gtacacggtcgtgagaaaccctttctacgtcccaatattgtttctggaagatacgagagc
accggcacttatctcgacacccattttcggcttttgagagaagactttgtgaggccttta
agggaaggtatcctggagcttttgcggagcttcgaggacagaggtttgagacagaagaaa
tttgacgatatcaggatctatttagacacgcatattattgccccgcgttgcgcctcgact
ggcatcgtgtacaaggtccagtttgacataaaaccattgaagtttgtccagtggcggaat
tctaaacgattgctctacggctcgctggtctgcatgtccaaagaccgcttcgaaaccttc
cttttcgctactgtttccaaccgcgatgccgcagaactcgccaacggggttgtggagctc
tgtttcgacgcgcagagccaggcgctgctggcagaggttcagccctcggactccttcctc
atggtggagacaactgcctactttgaggcctatcggcacgtgttagaagggctgcaggaa
atgcaggaagaagatgtcccattccagaggtacatcgtggagtgcgatgcgcaggtgaag
gaaccggcgtacctgaccaaggacactgactacaacttggcgcccttggtggagacgtcg
gatgaagagatgtgccctgatagtttgagaagcgtccgcgttctggatcccaagcagtgg
ctttcggtggaagccttgagattagacgagtctcagatgcaggcattgaatcttgcgctc
accaaggagctggctattatccaaggacctcctgggactgggaagacttacgtgggtctg
aagattgttcaggctcttttgactaatgagcaggtgtggcaaagcaccgtccagaagcgt
cccatccttatagtctgctacactaaccacgcactggatcagttcttagaaggaatatac
tcattccaaaaaaacgggatagtgcgtgttgggggcaggagtagcagcgaggtcttgcag
cagttcaccttgaaggagctgaggaagcactgcaacttcagactcaacttgccagggcac
ctctgcagagcctacgtgaacataatcggtgagatggcagagactgagaaggagctccag
gcaggagcgaagcagctggaatgcacaacctacggagttctgcatgagcgcttcctggag
gcctacattgagccccagcactgggccagtctgatgaagggaatggatgacaaggagttt
tactacagtggttcacagcactcaatgattctggagtggctgggccttggtgtatctgtc
tttacccagaatgctgaagagaatatatgggctgaaaatccagatggtcagcaggaggga
gaggaggagtgggaagatgaagcagaagaggatcttttgaacatcccagagatggctgat
ctgattgaagatgagagaatgattgaggatgaaaaggcagcaaagccttggaggaggaag
gaggaggaagatcacagagctgttcacagactagccagtgtgatgttggctatgcagctg
gaggaccaggaagaaggaacacctcaaccactacaggaggccatgcagtgggagatgact
cctggccagaggaggaaaatgaaacagaagatgaaggttgagctacggaagcaggatgca
atgacagagtcagaggccaaggctattcaggatctgtggcaacttgacctgagctcccgc
tggaggctttacaggctttggctgcagacttaccgggcttttattcgacggaggattctg
cgccatgaacagcagtatcaggtggcagcagaaaggctgaaagaactgaagcttcaggaa
gacctctgcattctcaaggacgccaaaattgtggggatgacaactacaggtgctgccaaa
taccgtcagatcttgcaaaaagtagagccgcgaattgtcatcgtagaagaggcggcagag
gtgctcgaggctcacaccatcactacgctgagcaaagcttgccagcacctcatcctcatt
ggagatcaccagcagttgcagcctagtgcaaatgtatatgacctggccaagaacttcagt
ctggaaatctctctctttgaacggctgatcaaagtggatttcccctttgtctgtctgaaa
taccaacaccgcatgcgtcctgaaattgcccgacttatcagtcctcatatataccaggag
ctggagaaccatccctctgtcctcaactatgagaacataaaaggcgtctcatctaacctc
ttctttgtggaacatgacttccctgagcaagagatccaggaagggaaaagccaccagaac
ccacatgaggcccagtttgtagtggaattgtgcaaatatttcttgtaccaggattatcaa
ccttctcagatcaccattctcaccacttacactggacagcttttctgtctgcgtaagctc
atgccagcaaagatctttacaggggtgaaggttcatgtagtagataagtaccagggggag
gagaacgatattattctgctgtcactggtgcggagcaacaaagaggagagaattgggttc
ttgcagattcctaatcgggtatgtgtagcattatccagagctaagaaagggctgtactgt
attggaaacatgagaatgcttggcaaggttcccctctggagcaagatcattcacaccctt
cgggagaaagatcacattggccgctcactgatgctttgttgtcaaaaccaccccgaaacc
aagacgcctgtatccacagctgcggacttcagcaaagtcccggaagggggctgtagccgt
ccctgtgagtttagattgagttgtggacatgtttgcacaagggcatgtcacccctatgac
atggagcacaaagagttccgctgtctgaagccttgtcagaaggtgctctgtgcagatggg
caccgctgtccacagctgtgttacgtgccctgtggacgatgcctcgtgaaggtcgagaaa
acaatttctaagtgtggccacaagcagatggtgccgtgctctactccagagagtgaattt
acgtgcctagaaaagtgccagaaaacactgaactgtgggcacaaatgcagcaattcctgt
ggggagcaatgcacgaaccagtgtcctgagagggtcacagccactctgaaatgtggccac
aagcaggcagttgaatgctggatcgctaggaggcaagagaggcaacctgagatggctgtg
aaatgttcttttaagtgttctgtcacactggcatgtggtcatgcatgttcaggctcctgt
tatacttgctttgaagggagatttcataaggcgtgtaacaagccatgcaagcgcttcttg
atctgctcccacaagtgtcaggagccctgcactgcagaatgccctccctgtgagatgaaa
tgcgagaactactgtgttcacagtaagtgtaacaagaaatgtggagaaagctgtgttccc
tgtgctgagccatgtgagtggcagtgccagcactaccagtgtacccgtctttgctctgag
ccgtgcaataggcctcgctgcaacgtgccatgtgctaagcgactgccctgtggccatccc
tgtgctggattgtgtggagagccctgcccaaacaagtgccttgtttgtaaccacgaggaa
ctcactcagatctttttcggctttgaggacgacccagatgctcgatttgtacagcttgaa
gactgtggccatatctttgagtcccaaggctttgaccattatatggataaagatgatgac
gcagtcaagctgaaggtatgccctttgtgtcaaaaacccatcaggaagaatctgaggtac
ggcaccagcgtgaaaaggcaggtggatgagatagaacaggtgaaacagaaaattcaaggc
tcagcacaggaaattgagtctagcagacaaagactgaaggctgcactggcaaggaatgat
gttctgaagaacaatctacaggagaagtacctcatgctgaaaggtatgctggaagcttct
gatctgtccacaaagaggattggactaattgagaaccagttgaacttctacgaacgtata
gcagagctaacagcttctgtgagcaaaatcgctgagaatgagaggccagggatgagaagg
cgcctgggtgaagtccaggcgtggctggataagcaacgcatcacttttacagaacaggag
ctctctgacctgcagtctgagatccagagattgagttatttgctgaacctcttggcaagt
tgcaacctttcaagtaggatgatctccccagtgctggcggcaaagattgccagagcacgt
gagatcctggaaggggcaaagaaattcacggaggaggatgaggctgcagtgaaggctcac
atggagaaaatcaaggctgacttgcccgtggcaggcctggggatttctgatgctgagcgc
gtgcagattgtccaagcgattgcctgtccccgtggccactggttcaagtgcaaaaatgga
catgtctatgtgattggggagtgtggaggggcaatggagacgagtaagtgccctgagtgc
cacgaagtcattgggggcacaaaccacactctggacagcaccaacagcctggcctccgag
atggacggcgcgacccacgcggcctggtccgatgtagccaacaacatgctcaacttcgag
gacctccgccggctgatatag
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integrated database retrieval system
