Empidonax traillii (willow flycatcher): 114063028
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Entry
114063028 CDS
T05887
Symbol
CDK5RAP1
Name
(RefSeq) CDK5 regulatory subunit-associated protein 1
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etl03016
]
114063028 (CDK5RAP1)
Enzymes [BR:
etl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
114063028 (CDK5RAP1)
Transfer RNA biogenesis [BR:
etl03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
114063028 (CDK5RAP1)
Prokaryotic type
Methylthiotransferases
114063028 (CDK5RAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Fer4_12
Motif
Other DBs
NCBI-GeneID:
114063028
NCBI-ProteinID:
XP_027750814
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MNVNDTEIAWAILQRSGYARTKELDEADVVLLVTCSVREKAEQAIWNRLQHLKALKARRQ
QARAPLRIGILGCMAERLKEEILHREKLVDVVAGPDAYRDLPRLLAVAESGQQAANVLLS
LDETYADILPVQTSAGGTTAFVSIMRGCDNMCTYCIVPFTRGRERSRPITSILQEVRMLS
DQGVKEVTLLGQNVNSYRDLSEVQFQSAAAPGLSRGFSTVYKAKQGGLRFTHLLDQVSRI
DPEMRIRFTSPHPKDFPDEVLQLIRERHNICKQLHLPAQSGSTRVLEAMRRGYTREAYLD
LVHHVRDSIPGVSLSSDFIAGFCGETEEDHQQTVSLLREVRYNVGFLFAYSMRQKTRAYH
RLQDDVPTDVKKRRLEELISAFREEAATANAALVGQEQLVLVEGPSKRSASELCGRNDGN
IKVIFPDAELEDAADRGALGRARPGDYVVVKVTSASSQTLRGVALCRTTLSRAAACR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgaacgacacggagatcgcctgggccatcctgcagaggagtggctatgccagg
acgaaggagctggatgaggcagatgtggttctccttgtcacctgttccgtgagggagaag
gcagagcaggccatctggaaccgtctgcagcacctcaaggcgctgaaggcccggcggcag
caggctcgagcccccctgcgcatcgggatcctgggatgcatggccgagaggctcaaggag
gagattctgcacagggagaagctggtcgatgtcgtggcaggccctgacgcctatcgtgac
ctgccccggctgctggccgtggccgagtctggccagcaagctgccaatgtcctgctgtcc
ctagatgagacttatgcagacattctgcctgtccagaccagtgcaggtggcacgacagcg
tttgtatccatcatgcggggctgtgacaacatgtgcacctactgcatcgtgcccttcacc
cgaggccgggaaaggagccgccccatcacatccatcctgcaggaagtgaggatgctctcg
gatcagggagtgaaagaagtgaccctcttgggtcagaatgtcaacagctacagagacctg
tctgaggtgcagttccagtcagcagctgccccaggcctcagccgtggctttagcacagtc
tacaaagccaaacagggaggtttgcgcttcacacacctgctggaccaggtctctaggatt
gacccagaaatgaggatccgtttcacctctccacaccccaaggattttcctgatgaggtc
ctgcagctcatccgggagcgacacaacatctgcaaacagctgcacctcccagcccagagt
gggagcacacgagtgctggaggccatgcggcgaggatacacaagagaagcgtatttagat
ctggtgcaccacgtgcgtgactccatcccaggagtgagcttaagcagcgatttcatcgct
gggttctgtggggagacagaggaagatcaccagcagaccgtgtccttgctgagggaagtc
cgctacaatgttggcttcctgtttgcctacagcatgagacagaagacccgggcgtatcac
cggctgcaggacgatgtgcccacggacgtgaagaagcggcggctggaggagctcatctct
gccttccgagaggaggctgccacagccaacgcagcgctggtggggcaggagcagctggtg
ctggtggaggggcccagcaagcgctctgcctcggagctgtgtgggaggaacgacggcaac
atcaaggtgatcttccccgatgccgagctggaggacgctgcggaccgcggggctctgggc
agagcccggccgggggactacgtggtggtgaaggtgacctctgccagctcgcagaccctg
aggggagttgcgctctgccggacgaccctgtcccgtgctgctgcctgtcgttga
DBGET
integrated database retrieval system
