Empidonax traillii (willow flycatcher): 114063104
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Entry
114063104 CDS
T05887
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl02010
ABC transporters
etl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114063104 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114063104 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
etl02000
]
114063104 (ABCA1)
Transporters [BR:
etl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
114063104 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
114063104
NCBI-ProteinID:
XP_027750990
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDT
SIKDVQKVLGKLRKLGNSSGLDLKLRDFLVDNETLSDFLHHNVSMPSSAVEELLNARVNL
QQVIVSGYRMRLRDLCNNSTSSEYLKIQNQTVAMDAEALICTLSKEKLHAAEQAFRANLN
PLKPLQTQLSFNSSLWDLTETVETLRDSVGKLVKELLTMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSNRPEDFGAEDG
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEARLINKSLELLDQRRFWAGIVFN
EIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
VFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEESQDRQHPHPDQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAADV
GLPHKLKARTSRLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNHLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTQKLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWTTA
LVPESVQDIFLKGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTTDILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctatggaagaacttcacctacagaagaaga
cagaccttccagctgctgatcgaagttgcctggcctctgttcatcttcttcatcctgatc
tctgtaagactttcatatccgccctacgagcagcatgaatgtcattttccaaataaagct
atgccttcagcaggcaccttgccatggatacaggggatcatctgcaatgccaacaaccct
tgtttccgctacccaactcctggggaatcccctggtattgttgggaacttcaatgcctcc
attgtttcccgcctgttctcggatgccaagaggttactgctgtacagccaacaggacacg
agtataaaggatgtccagaaggtcctgggaaaactacgcaagttgggaaactcctctggc
ttagacttgaaacttcgggatttcctggttgacaatgagacgctctcagacttcctccac
cataatgtgtccatgccatcatctgcagtagaggagttactgaatgcaagggtcaatctc
cagcaggtcatagtgtctggttatcgaatgcgattgcgggatctctgcaataactcaact
tcatctgaataccttaaaatccaaaatcagacggtggccatggacgctgaagccttaatt
tgcaccttgtcaaaggaaaaactccatgcagctgagcaagccttccgtgccaacctgaat
cctttgaagccccttcagacacaactttctttcaattcgtccttgtgggatctgacagaa
actgtggaaactttgagagacagcgttgggaagcttgttaaagagttgctgactatgaag
agctggagcgacatgaggcaggaggtgatgttcctgaccaacgtgaatgcctcaaactcc
tctacgcagatctaccaggctgtgtcgcgcattgtgtgcggccatcctgaaggtggaggg
ctcaaaattaaatcccttaactggtatgaggacaacaactacaaagcactgtttggaggc
aacagcaccgaagatgatgtcattaacttctatgacaactccacaacaccctactgcaat
gagctaatgaagaacttggaatccagcccgctttccaggattatctggagggctttgaaa
cccttgctgattgggaagatcttgtacactccagacacaccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaagatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacgctgctgaaaggcaaagccctctgggacctgcacttgccagcatccaactggaca
gtggaggacgttgcccgtttcctgtcgaaccgtccggaggactttggagcagaagatggc
tctgtgtatacctgggtggatgccttcaacgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacttggacaaactggagcctgtggccacagaagcccggctt
ataaacaagtccttggaactcctggatcagcggaggttctgggctggcatagtcttcaat
gaaatagctcctgacagcacggacctccctcagcacgtgaagtacaagatacgcatggac
atcgataacgtggaaaggaccaacaagatcaaggatgggtactgggatcccggtccccgt
gctgacccctttgaggacatgcgctacgtctggggaggctttgcctatctgcaggacgtg
gtggagcaggccatcatcagggtgcagactggcacggagaagaagacgggagtttatgtg
cagcagatgccctacccatgctacgtggatgacatatttctgcgcgtcatgagccgctcc
atgcccctcttcatgacactggcctggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaggaagctcgactgaaagagacgatgaggatcatgggacttgacaatggc
atcctttggttaagctggttcattagcagcctcgtccctctcctgatgagtgcaggactg
ctggtgctgatcctgaagatggggaatctgctgccttacagcgaccctagcgtggtgttt
gttttcctctcgatcttcggcgttgtgaccatcctccagtgcttcctcatcagcaccgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacactgtacctg
ccttatgtgctgtgtgttgcctggcaggactatatcagcttctcactcaagatttttgcg
agcctgctgtctccagtagcctttggttttggttgcgagtactttgcactgtttgaggag
cagggtgttggtgttcagtgggacaacttctttgagagccccttggaagaagatggcttt
agcatcaccacatctgccgtcatgatgctgtttgatacgttcctgtatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcacaaagtcatattggtttggcgaggaatcacaggacaggcagcaccctcatcctgat
cagaaggggtcttcagaggtctgcaaggaggaagagccggtgcatttgagcctcggtgtt
tccattcagaacctggtcaaggtttatcgtgacggcaagaaagttgctgtagatggtctc
acactgaacttctatgaaggccaaatcacctccttcctgggacacaatggagcaggaaaa
accactaccatgtccatcttgactggcttgttccccccaacttcgggtacagccttcatc
ctgggcaaagatatccgctctgagctcagcaccatcaggcagaacctgggtgtatgtcca
caacacaatgtgctgtttgacttgctgactgtggaggagcacatctggttctatgctcgg
ctcaaagggctgccggaaaagaaagtgaaagaggagatggagcagatggcagcagatgtt
ggtttgcctcacaaactgaaagctaggacaagcagactctctggtggcatgcagaggaag
ctgtctgttgccttagcatttgttggcggctccaaggttgtcatcctggatgagcccaca
gctggggtggatccttattctcgcagggggatatgggaactgcttctgaagtaccggcaa
ggtcgcactatcattctctccacacaccacatggatgaggcagacattttgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cacctgggaacaggctattatttgaccctggtcaagaaggatgtggattcctctctgagc
tcctgcagaaacagcagcagcacagtgtcctatttgaaaaaggatgacagtgtctcccag
agcagctctgatgctggcctcggcagtgaccatgaaagtgacacacttacaatagatgtc
tctgcaatttcaaatctcattacaaaacatgttcctgaggccagactagtggaggacatt
ggccatgagttaacctatgtcttgccctacaaggctgctaaagagggagcttttgtggag
ctgttccatgaaattgatgaccgtctttctgatcttggcatttccagctatggcatctct
gaaactaccctggaggagatcttcctgaaagtggctgatgacagcggtgtggatgcagaa
acctcagatgggacgttgccagccagaaggaacagacgcgtgtttggagatagacagagc
tgccttcgtccatttacagaagatgatgcatttgatcctaatgattcagacatagatcca
gcagaatccagagagacagaccttctcagtggcatggacgggaaaggctcctaccagatg
aagggctggaagctcacccagcagcagttcatggctctgttgtggaagaggatgcttatt
gccaagagaagccggaagggcttctttgcccagatcgtgctgccagctgtctttgtgtgt
attgctctcatgttcagcctgattgttcctccttttgggaagtatcccagcctggaatta
caaccctggatgtatgatgagcagtacacttttattagcaatgatgctcctgaagatgca
ggcactcagaagcttctggatgccctgcttgataagcctggttttgggacgcgctgtatg
cagggacattccatcccagacactccttgcactgtggggcagaaggaatggaccactgct
ttggtcccagagtcagtccaggacatcttcttgaaaggcaactggagcatggagaaccct
tccccgtcttgtgagtgcagcaatgagaagatcaagaagatgctgcctgtgtgcccccct
ggtgccggcgggctgccaccgccacagcgagagcaggacaccactgacatcctccagaat
ctaacgggccgcaatatatcagactacctagtgaagacctatgcccagatcattgggaaa
agcttaaagaataagatctgggtgaatgagttcaggtatggtggcttttccttgggagcc
agcagttcccttgtgcttcctccaagccatgaagtcactgatgccattaaacaggtgaag
aaaatcttggagctagcacagggaagttctggagatcgatttctcaatagcttgtcaagc
ttcatgaaaggcctggatacaaagaacaatgtgaaggtgtggtttaacaacaagggctgg
catgccatcgcatccttcctgaatgtgatcaacaatgccatcctccgggccaacctgcag
cagggtgaaaaccccagtgcctacgggatcactgccttcaaccaccccctgaacctcacc
aagcagcagctctctgaagtggccctgatgaccacctctgtggatgtcctcgtctccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaagaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctactgg
ctggccaactttgtctgggatatgtgcaactacattgttccagccacactggtcgtcatc
atcttcatctgcttccagcagaagtcctacgtatcctcctccaacttgcctgtgctggct
ctccttctgtttctctatgggtggtccatcacccctctcatgtatccggcctccttcgtg
ttcaaaatccccagcacagcatatgttgtgctgaccagcgtgaacctcttcattggcatc
aacggcagcgtggccacctttgtcctggagctcttcaccaacaacaagctgaaggacatc
aatgacattctgaagtctgtcttcctcatcttcccccacttctgcctggggcggggactc
attgacatggtgaaaaaccaggccatggctgatgctctggagaggtttggagaaaatcgt
tttgtgtcccctctgtcgtgggacctggtgggaaggaatctctttgccatggcagtagag
ggtgttgtttttttcctcatcacagtgctcatccagtacaggttcttcataaaacccagg
cctgtctatgcgaagctgccacctgtgaatgatgaagatgaggatgtaaccagagagagg
cagaggataattagtggaggaggacagagtgacatcctggaaatcaaggagctaaccaag
atttacagaatgaagcgaaagccagcggttgataggatatgtgttggaatcccccctgga
gagtgctttggactcctgggagtaaatggtgctggcaagtcgtccacttttaagatgcta
actggtgatacagatgtgacaggaggagaagctttcctcaaaggaaacagcatcctctcc
aacattcaagaagtccatcagaacatgggctactgcccgcagtttgatgctgttaatgaa
ctgctgacggggcgagagcacttggagttctttgccctcctgaggggtgttccagagaaa
gaagtctgcaaggttggcgagtgggcaattcggaaactgggccttgtgaaatacggagag
aaatacgccgggaattacagtggagggaacagacgcaaactctccacggccattgccctc
attggagggccacccgtggtgttcctggatgagcccacaacagggatggatcccaaagca
cgtcgtttcttgtggaactgcgctctgagcgtaatcaaggagggcagatcggtggtgctc
acatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcgataatggtcaac
gggcgattcaggtgcctgggcagtgtccagcatctaaagaacaggtttggagatggttac
accatagtggtgagaattgcaggggcaaacccagacctgaagcctgttgaggagttcttt
gggcatgcgttccctggaagtgtcctgaaggaaaagcatcggaatatgctgcagtaccag
cttccttcttcaccatcctccctggccaaaatattcagtattctctcccagaacaaaaag
agactccacatagaagactactccgtttctcagacaacacttgaccaagtatttgtaaat
tttgctaaggaccaaagtgacgacgaccataccaaggacctgtcattgcacaaaaaccag
actgtggtagacattgcaatccttaattccttcctgcaagatgagaaggtaaaagaaagt
tgtgtgtga
DBGET
integrated database retrieval system
