Empidonax traillii (willow flycatcher): 114063107
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Entry
114063107 CDS
T05887
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114063107 (PRDM1)
Transcription factors [BR:
etl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
114063107 (PRDM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
114063107
NCBI-ProteinID:
XP_027750953
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MRIKGCFLFFQAATQCSSNTVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVN
DHPLDPSADGGTLTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTS
DTVPKNANRKYFWRIYSGGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPSSRELTMMNLTQTHINPKQHSADKDELYQKSI
PKKEHSVKEILKMESNPPKGKDFFQTNISPVTPEKDLDDLRKNYSPERCFFPRVVYPIRP
HIPEDYLKASLAYGMDRPSYITHSPIQASTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPL
APTSQEHREPYSYLNGSYGSEGLGSYPGYAPPGHLPPTFLPSYNPHYPKFLLPPFNMSCN
NLSALNNINGINNFNLFPRMYPLYGNLLSGGSLSHHMLNPTTLPSSLPSEGGRRLLQPDH
PRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGG
EEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPF
KCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKL
CPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDL
NRINEEIEKFDISDNADKLEEVEDNIDLTSIVEKDILTLLRREMEGANLKVSLQRNLGNG
LISSGCNLYESSDLSIMKLPHGHPLPLLPVKVKQETVEPMDP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaggctgttttctttttttccaggctgctacacagtgtagctcgaacact
gtgagtttcaagaatctggtgaaagggagagagtggacaatgaaaatggacatggaggat
gctgacatgactctgtggacagaagctgattttgaagagaagtgtacatacattgtaaat
gatcacccgttggatcccagtgccgatggaggcaccctaactcaggcagaggcttccttg
ccaaggaacttgacttttaaatatgcatctaactgcaaagaggtcactggagttataagc
aaagagtacatcccaaaaggaacacgctttggacccctggtaggagagatctataccagc
gatacggttcccaagaatgcgaacagaaaatacttttggcggatctattcaggtggtgag
cttcaccacttcattgatggatttaacgaggacaagagcaactggatgcgttatgtaaac
cctggctactctgttcaggaacagaacttggctgcttgtcagaatggaatgaacatctac
ttctataccatcaagcccatccctgccaaccaagagctgcttgtatggtattgccgagac
tttgcagaaaggctgcactatccctcctccagagagctgacaatgatgaacctcacgcaa
acccacattaatccaaagcagcacagtgctgataaagatgagctttatcagaagagcatc
ccaaagaaggagcacagtgtgaaagaaatactgaaaatggaatccaatcctccaaaagga
aaagacttcttccagaccaacatttcaccagttactccagaaaaggacttggatgatttg
cgtaagaactatagcccggagaggtgtttcttccctcgagttgtctacccaatccgacct
cacattccagaagactatctgaaagcttccttagcatacgggatggacagacccagctac
attactcactcacccatccaggcatctactacaccaagtccttctgggaggagcagccca
gaccaaagtttaaaaagttcaagccctcacagcagtccaggggtcacggtttcacctctg
gcacctacttcccaagagcacagagagccatactcttacttgaatggatcgtatggctca
gaaggattagggtcttaccctggatatgcaccccctggccacctcccacctacctttcta
ccatcctataacccccactaccccaaattcctgttacctccattcaatatgagctgtaat
aacctgagtgctttgaacaatatcaatggcatcaacaatttcaatctgttcccaaggatg
tatcctctttatggcaacctgctcagcggaggtagcctttcccaccacatgctgaacccc
accacgctccccagttcattgcccagtgaaggaggccgtcgattgctgcagcctgatcat
ccaagagacttcctcataccagcacctaacagtgccttctctatcacgggcgctgctgcc
agcatgaaggacaagccatgcagccctaccagtgggtcacccaccgctggtacagcagcc
agttcggaacacataatgcaacctaaacctacctcagtggtgttggctgccaccggcggt
gaagaagccatgaatctcattaaaagtaagaggaatgtgaccggttacaaaaccctcccc
tacccacttaagaagcaaaatgggaagatcaagtacgaatgcaatgtttgctccaagacc
tttggccagctctccaatctgaaggtgcacctcagagtacacagtggagagagaccattt
aaatgccagacttgcaataaaggcttcacacagttggctcacctccagaagcactatctg
gtacacacgggagaaaaaccccatgagtgtcaggtttgtcacaagcggttcagcagcacc
agcaatctcaaaacccacctgcggctccactctggagagaagccttatcagtgcaagctc
tgcccagccaaattcacccagtttgtgcacctgaagctgcacaagcgtctccacacccga
gaacgtccccataaatgcatccactgccacaagagctacattcacctctgcagcctccag
gtccacctgaagggcaactgccccgttgctcctgcctccggcctctccatggaggacctg
aatcgaatcaatgaggagatcgagaagttcgacatcagtgacaatgctgacaagttggaa
gaagtggaggacaatatcgacttaacatcgatcgtggagaaggatatactgaccctgctc
aggagggaaatggaaggagctaatctgaaagtatctctacagaggaacctgggaaatggg
cttatctcgtcaggatgcaacctttacgagtcgtccgatctgtcaattatgaagttgcct
cacggtcacccactacctctgttacctgtaaaggtcaagcaagaaacagttgaaccaatg
gacccttaa
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integrated database retrieval system
