Empidonax traillii (willow flycatcher): 114063228
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Entry
114063228 CDS
T05887
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03030
DNA replication
etl03410
Base excision repair
etl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114063228 (POLE)
03410 Base excision repair
114063228 (POLE)
03420 Nucleotide excision repair
114063228 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
etl03032
]
114063228 (POLE)
03400 DNA repair and recombination proteins [BR:
etl03400
]
114063228 (POLE)
Enzymes [BR:
etl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114063228 (POLE)
DNA replication proteins [BR:
etl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
114063228 (POLE)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
114063228 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
114063228
NCBI-ProteinID:
XP_027751173
LinkDB
All DBs
Position
Unknown
AA seq
2289 aa
AA seq
DB search
MGLRGERRAGGPREAADGAGSGRDDAPTLSAIKRLERAQRTDRLDALFGFERPAEPGERT
GWLINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKGCEREVSSFL
SKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEISPAVRKNRER
DQANDDYTAMLSSALSGGSLSMDEEEASRKIANQMDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRYRGNTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIIV
TYNGDFFDWPFVEARAAAHGMNMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLRHAIEEEEGLPLDQVTNFQEVC
DEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLSPDGPPRAFHELSQEEQAKYEK
KRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEMGDASEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNIL
VKEGFTNDQYQELQDPTSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFII
SKKPEGSPVTERAIPLAIFQAEPSVRKYYLRKWLKSPSLQDFNIRAILDWDYYIERLGST
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFILEGKRQVLANQP
MEGMTSSQVGDIEDFGAVKIPQPLVPIANKRKRVPAAEESKKLSQDLELSQSWREILGPP
PPLGTTKEERLVWLRFQQKKWELQARQRRKRRRLEDGGLGAGAGVVRDASSKGLSSYLRR
TARSILDLPWQIVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVNQRIPKPEEGTAY
RKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALSHL
GCVCMVSRQLVQHLAGREAEIFDIEHLEMRSLAQFTYLEPGSIRHIYLYHSSQGSKAILG
LFIPSQRKASIFVLDKVRSNQMPNLTTLFSAERAALLEKVGEELLPPDKHTFEVRAETDP
KAIYRGVQRLLLGYKDERRGPTLVAVQSNWDLKRLASGIPIIEEFPLVPIRLVDDVSYSV
LDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGSDLFFSRHLRHHS
HLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLELDIQSLAVNTVLQ
SHHVNDMEGGSSMSISFDMIQQASLEDMVTGNQASNIPASYDETALCSNTFRILKSMVVS
WVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGS
SVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFLLWMDPAN
YGGIKGKVDSRIHYGECHWLLQMNTSKRQALEEEDSEEEEEVAREEKEEEGEPDVEELLE
NSWNIAQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRNTPGSTPIKRRSDSQMSQEA
LVELGAMPGMITFSQNYVAGELTQSFFTITQKIQKKMAGSRNATEPSDMFPVLPGSYLPL
NNPALELIKYVCKVLSLDANITNQVNKLHRDLLRLIEVGEFSEAAQFQDPCRSYVLPEVI
CRNCNFCRDLDLCKDPALSQDESVLPGWICPNCQVQYDTNAIEMALVEALQKKLMAFVLQ
DLICKKCHGVKEMHMPVYCSCAGDFALTISSQTFTDHIGVFRNIAQHYSMAHLLETIEWL
LHNNPQLQQ
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcgcggggagcgccgggcgggcgggccccgggaggcggcggatggcgcgggg
tccggccgggacgatgcccccacgctgtccgcgatcaagcgcctggagcgggcgcagcgc
acggaccggctggacgcgctgttcggcttcgagcggcctgcggagcccggcgagcggacg
ggctggctcatcaacatgcacccgacggaggtgctggatgaggaccggcggtccgtgagc
gcggtggactactacttcatccaggaggacgggagccgcttcaaggtggccctgccctac
aagccctatttctacattgccacccagaagggctgcgagcgggaagtgtcctcctttctc
tccaagaagttccaagggaagattgcaaagctggagactgtccccaaagaggacttggac
ctgccaaaccacttggtgggcctgaagaggaactacatcaagctgtccttcaacacggtg
gaggacctggtgaaggtgcggaaggagatctctcctgcagtgaggaaaaacagggagcgg
gaccaggcgaacgatgattacacagccatgctgtcgagtgctctgagtggaggcagtcta
agcatggatgaggaggaagcctccagaaaaattgccaaccaaatggacaacattgtggat
atgcgagagtacgacgtgccctaccacattcgcctctccattgacctgaagatccatgtg
gctcactggtacaacgtgcgataccggggcaacacctacccccccgaaatcacccgccga
gacgaccttgtggagcggccggatcctgttgttcttgcctttgacattgaaacgaccaaa
ctccctttgaagtttcctgacgcagagacagaccagatcatgatgatctcctatatgatt
gatgggcagggctacctgatcacaaacagggagattgtctcagaagacattgaagacttt
gagtttactcccaagccagagtatgagggtccattttgtgtctttaatgaaccagatgag
gctcatttaatccagaggtggtttgaacatgtccaggagaccaaacccaccatcatcgtc
acatacaacggagacttctttgactggccctttgtggaagcaagagcagcagctcatgga
atgaatatgtatcaggaaattgggtttcagaaggacagccagggagagtacaaggcatcc
cagtgcatccacatggactgtctgaggtgggtgaagagagacagttacctcccagtagga
agtcacaacctgaaagcagcagctaaagcaaaactgggttacgatccagtagagctggac
cctgaggagatgtgccggatggctacagaagagcctcagaccctggccacctactcagtg
tctgatgccgttgctacctactacatgtatatgaagtatgtgcatcccttcatctttgcc
ttatgcaccatcattcccatggagcctgatgaggtgttaagaaaaggatcggggacactg
tgcgaggcgctattgatggttcaggcctatcatgccaatatcatcttccctaacaagcag
gagcaggaattcaacaaacttacagaagatgggcatgtgctggactctgagacatatgtt
ggaggccatgtggaagcactggaatctggggtcttccgcagtgacattccctgccgcttc
aaaatgaatcctgctgcctttgacttcctggtgcagcatgtggagaagacgctgcggcac
gccattgaggaggaggagggtctgcccttggatcaggtcaccaacttccaggaggtttgt
gacgaaatcaaggtcaaactgaattctctgaaggatgtccccaacagaattgagtgtccc
cttatttaccatctggacgtgggggccatgtaccccaacatcattctgaccaacagattg
cagccctcagctatggtggatgaggccacatgtgctgcctgtgacttcaacaagccaggt
gccaactgccagcgccggatgacatggcagtggagaggagagttcatgcctgccagccgc
agcgagtaccaccgcatccagcagcagctggagtcagagaagttccctcctctgtccccc
gatggaccaccccgtgcctttcacgaactctcccaggaagaacaggcaaagtatgagaaa
aagcgcctggcagattactgccgcaaggcgtacaagaagatccatgtcaccaaggtggag
gagcgagtcaccaccatctgccagcgagagaactctttctatgtggacacggtgagagcg
ttccgggaccgccgctatgagttcaaggggctgcacaaggtgtggaagaagaagctgtca
gcagcagtggagatgggagatgcctccgaagtgaaacgctgcaagaacatggagatcctc
tatgagtccctgcagctggcccacaagtgcatcctcaactccttctatggatatgttatg
cggaagggagctcgctggtactccatggaaatggctggcatcgtctgcttcacaggggca
aatatcatcacccaggccagagagctgatcgagcagattgggagacctctggaactggat
actgatgggatttggtgtgtcctccccaacagcttcccagagaactttgtcatcaagtca
accaatgccaagaagccgaaggtaaccatctcttacccgggagccatgctgaacatcctg
gtgaaggaaggcttcaccaatgaccagtaccaggaactgcaggacccaacctcgctcacc
tacgtcacgcgctcggagaacagcatcttttttgaagtggatggcccatacctggccatg
atcctgccagcttccaaagaggagggcaagaagctgaagaaaaggtacgcggtgttcaac
gaggatgggtccctggctgagctgaaggggtttgaggtgaagcgccggggagagctgcag
ctggtgaagatattccagtcatctgtgttcgaagcctttctgaaaggcagcacgttagaa
gaggtctacgcttcagtggccaaggtggctgattactggctggatgtactatacagcaag
gctgccaacatgcccgattcagagctgtttgagctcatctcggagaaccgctccatgtca
cgcaagctggaggactatggggagcagaagtccacctccatcagcactgccaagcgcctg
gcagagtttttgggggaccagatggtgaaggacgcagggctgagctgtcgcttcatcatt
tctaagaaaccagagggttctccagtcactgagagagccatcccccttgccatcttccaa
gctgagcccagtgtgcgcaaatactacctccgaaaatggctgaagagcccctcactgcag
gacttcaacatccgtgcgatcctggactgggactactacattgagagactgggcagcact
atccagaaaatcatcaccattcctgcagccctgcagcaggtaaagaacccagtgccgcgg
gtccggcacccagactggctccacaagaaactcctggagaagaatgacgtgtacaaacag
aaaaaaatcaatgagctcttcattttggaaggcaagagacaggtcctcgccaaccagcct
atggaggggatgaccagctcacaagttggtgacatagaggactttggggctgtcaagatc
cctcagccactggttcctattgcaaataagcggaagcgcgtccctgctgcagaggaaagc
aaaaagctgtcccaggacctggaactgtcccagtcctggcgggagatcctgggcccacct
ccacccctgggcaccaccaaggaagaacgtctggtctggctgcgcttccagcagaagaag
tgggagctgcaggctcggcagcggcggaagaggcggcggctggaggacggcgggttgggg
gcaggtgcaggagtggtccgcgatgcctcctccaagggtttgagcagctacttgcgccgg
acagcgcgcagcatcctggacttgccgtggcagatcgtgcagatcgctgagaccagccag
cctgggctgttcaggctgtgggcagtgatagggagcgacctgcactgcatcaagctgagc
atcccccgtgtcttctatgtcaaccagcgcatcccaaagccagaggaggggacagcctac
aggaaggtgaataggatcctgccccgctcaaacttggtttacaacctgtacgaatactct
gtccctgaagacatgtaccaagagcacatcaacgaaattaatgcagacctctctgctccg
gacatcgagggagtgtatgagacacaggtgccactgctcttccgtgccctgtcccacctg
ggctgtgtgtgcatggtcagcaggcagctcgtccagcacctggcagggcgagaggccgaa
atcttcgacatcgagcacctggagatgcgctcgctggcccagttcacttacttagagcca
ggaagcattcgccacatctacttataccacagctcccaaggcagcaaggcaatcctgggc
ctcttcatcccctcacagcgcaaagcttccatcttcgtgctggacaaggtacgcagcaac
cagatgcctaatctcaccaccctgttctcagcggagcgtgcagctctgctggaaaaggtg
ggtgaggagctgctgcctccagacaagcacacttttgaggtgcgtgctgagaccgacccc
aaggccatctacagaggtgtccagcggctacttctgggctacaaggacgagcgccgaggc
cccactctggtggctgtgcagtccaactgggacctgaaacgactagcaagtgggattccc
atcatcgaggagttccccttggtccccatccggctggtggatgatgtcagctactcggtc
ctggactggcagcgccatgctgcccgccgcatgatccgccactatctcaacctggacacc
tgcctctcccaggcttttgagatgagcaggtactaccacatccccattgggaatctccct
gatgacatctccacttttggctctgacctgttcttctcgcgccacctccgtcatcacagc
cacctgctgtggctgtcccccacagcccgccctgacctggggggaaaggaggctgatgac
aaccgcctggtcatggagtttgatgagagagcctcagtggagatcaacaaccctggctgc
tactccacagtgtgtctggagctggatatccagagcctggccgtgaacaccgtgttgcag
tcccaccacgtgaacgacatggaaggaggctccagcatgagcatcagctttgacatgatt
cagcaggcatccctagaggacatggtgacagggaaccaagcttccaacattccagctagc
tatgatgagaccgctctctgctccaacactttcaggatcctgaagagcatggtggtgagc
tgggtgaaggagatcacacagtaccataacgtctatgcagacaaccaggtcattcacttt
taccgctggctccgctctccttcctccctgctctatgacccagcacttcaccgcacactc
cacaacatgatgaagaagcttttcctgcagctggtggccgagttcaagcgcctgggctcc
tccgtggtctacgccaacttcaaccgcatcatcctgtgcaccaagaagcggcgcattgag
gatgccatcagctacatggagtacatcatcaacagcatccactcgaaggagatcttccat
tccctgaccatatctttctcacgctgctgggagtttcttctctggatggacccagcaaat
tatggaggtatcaagggaaaagtggattctcgcatccactacggggagtgtcactggctc
ctccagatgaacaccagcaagaggcaagcattggaagaggaggacagcgaggaagaggag
gaggtggcaagggaagaaaaggaggaggaaggggagccggatgtggaggagctcctggag
aacagctggaacatcgcgcagttcctgccccaggctgcctcctgccagagctacttcttg
atgattgtgtcagcctacattgtggccgtgtaccacagcatgaaggaggagctgcggcgt
aacactcccgggagcacccccatcaagaggaggagcgacagccagatgtcccaggaggct
ctggtggagctgggggccatgcctggcatgatcaccttctcacagaattatgtggctggt
gagctcacccagagcttcttcaccatcacccagaagatccagaagaagatggctggttcc
cgcaatgccacagagccctcagacatgttccctgtcctgcctggctcctacctgccactc
aacaacccagccctggagctcatcaaatatgtttgcaaggtcctctccctcgatgccaac
ataaccaaccaggtgaacaaactgcaccgggacctgctgcgccttatcgaggtgggcgag
ttctcggaagcagcccagtttcaggacccatgccgctcctacgtgcttcctgaagtcatc
tgcaggaactgcaacttctgccgggacctggacctgtgcaaggaccctgccctctcccag
gatgagtcggtgcttcccggatggatctgccccaactgccaggtgcagtatgacaccaat
gccattgagatggcgctagtggaagccctgcagaagaagctgatggccttcgtgctgcag
gacctgatttgcaagaagtgtcatggtgtgaaggagatgcacatgcccgtgtactgcagc
tgcgctggagactttgccctcaccatctcctcccagaccttcactgaccacatcggcgtc
ttccggaacatcgcccagcactacagcatggcccacctgctggaaaccattgaatggctg
ttgcacaacaacccccagctccagcagtga
DBGET
integrated database retrieval system
