Empidonax traillii (willow flycatcher): 114063396
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Entry
114063396 CDS
T05887
Symbol
ITGB4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04382
Cornified envelope formation
etl04510
Focal adhesion
etl04512
ECM-receptor interaction
etl04518
Integrin signaling
etl04810
Regulation of actin cytoskeleton
etl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114063396 (ITGB4)
04518 Integrin signaling
114063396 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114063396 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114063396 (ITGB4)
04810 Regulation of actin cytoskeleton
114063396 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114063396 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
etl04147
]
114063396 (ITGB4)
04515 Cell adhesion molecules [BR:
etl04515
]
114063396 (ITGB4)
04090 CD molecules [BR:
etl04090
]
114063396 (ITGB4)
Exosome [BR:
etl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
114063396 (ITGB4)
Exosomal proteins of bladder cancer cells
114063396 (ITGB4)
Cell adhesion molecules [BR:
etl04515
]
Integrins
Integrin beta subunits
114063396 (ITGB4)
CD molecules [BR:
etl04090
]
Proteins
114063396 (ITGB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
I-EGF_1
PSI_integrin
EGF_Teneurin
EGF_integrin
EGF_2
EGF_TEN
vWA_SIBA-E
SEA
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
114063396
NCBI-ProteinID:
XP_027751437
LinkDB
All DBs
Position
Unknown
AA seq
1863 aa
AA seq
DB search
MRRKRMDVLVGMCARLLLLSLLCATGLCQWNKNNRCVLSRAKSCTECIRVDKDCSFCTDE
SFEEPRCDLRENLQRYGCREGSIVSTRGEMQTQKNSSINTSLKRTQVSPQGMHLRLRAGE
EMSFNMDVFQPLESPVDLYILMDFSYSMSDDLDNLKSMGQNLAEFLQELTSNYTIGFGKF
VDKVSSPQTDMRPEKLREPWNNADSPFSFKNVIRLTSNINHFSQELRKERISGNLDAPEG
GFDAILQTAVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEQCHLDSRG
TYVYDTKQDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDSSN
IVELIRTAFERIRSKMDIRADFTPRAMKTEFTSSMYEKTESGSFLITRGEVGKFKMHVKA
LEHVGGQHVCSLPEKDRQGVIQVKPTSLSDSLTVSASVVCDVCPCEQQQELNSPKCSFHG
NFVCGQCICHPGWRGDTCDCSPASSPDNEACIRPGDVEPCSGRGECLCGKCQCYSEDLVQ
RFDGAFCEYDVLQCPRTSGFLCNDRGRCSRGACVCESGWQGPGCECPTSNDTCIDSRGGI
CNNHGRCECGRCICDMASLYTSSTCEISYSLGFQAVCESIRDCVRCQTWGTGSLKGNCST
CHLQIQMVEELKKEEAGEYCSFQDEDDDCTYHYSLEGDPSVLPNTTVRVQKNKECPPRSF
FWLIPLLIFLILLLGLLLLLCWRFCACCKACLALLPCCARGRTVGFKEDHYMLRHSLMSS
DHLDTPLVRSGSLKGRDTVRWKIHNNVHKQGFASPAATNPKDLIPYGLSLRLARLFTQNL
TKPDTRECEQLRKEVEENLNDVFKHIPGCHKLQQTKFRLQPNSGKRQDHTIVDTVLTAPR
SAKPDIIKAVEKHVSHEAFNELKVAPGYYTVTSDQDAQGLVEFQEAVELVDVRVPLFIRE
EDDDEKQLQVEAIEVPNGIAKIGRRVVNITIIKEQASSLITFLEPAYSHSRFDKLAKIPV
QREIIDNGKSQVTYRTRDLTAKNGRDYVFTEGELVFQPGETRKEVQVPLLELTEIDTLLN
SCQLKQFAIDLLHPKYGAKIGRYAQATVTIADPELVDGVPSMTGLGQVPQSPKGRLSAPL
NPNARALSSREISFNWFPPLGKPLGYKVKYWIQGDPESEAHLIDVKTPPAELSNLYPFCD
YEMQVCAYNALGEGVYSDIIHCRTLEEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGDIT
AYEVSYGLVNEDNIPVGPVKKVLVEDPKKRMVLIENLRESQPYRYTVKARNAAGWGPERE
ATINLATQPKRPMSIPIIPDVPIVDAEGGEDYDSYLMYSTDVLRSPAGSKRPSVSDDSGS
RWKYVPLLGEDLDLRRITWRLPPETIPRLSGSSRLSSDTEGLLPEEDSDVATGSVRRSGT
PRPQAEHLLNGRVDFSFPGSASGSLTRTANTSYHQLSSHVHQEHRVMGSSSLTRDYSMVQ
MGHDYPGTLLPPIREDAGRTIPRPRDVGFRSRAKVKGYYPSIGCRDSIIMTDGSTGICKY
IDSRKPLGIPDTPTRLVFSALGPTSLKVSWQEPRCEKEVQGYSVQYQLLSGGEVNRITIP
NPSQNSVVVEDLLPNHSYIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPGTPFTL
STPCAPGPLVFTALSPDSLHLSWERPREPNGPILGYRITCEMLHGGGEPRTIYVEGDNLE
TTLTVPHLSENVPYKFKVQANTTQGFGPEREGLITIESQNRGAFSQFGGQQYMREEVYKF
PTEYTTKTSISHSSLDPHFTDGMLVTSQRVENTSSTLTQEFVSRTVMSSGTLTKQVERQF
YEA
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaagaggatggatgtgctggtggggatgtgtgccaggctgctcctcctgtcc
ctgctctgtgccaccggcctctgccaatggaacaaaaataaccgctgtgtgctgtcccgg
gcaaagagctgcaccgagtgcatccgagtggataaggactgctccttctgcactgatgag
agctttgaggagccgcgctgtgacttgcgggagaacctgcagcgttacggctgcagggag
ggcagcatcgtgagcacccggggcgagatgcagacccagaagaattccagtatcaacaca
tccctgaagaggacccaggtgtccccccagggcatgcacctgcggctgcgagctggggag
gagatgagcttcaacatggatgtcttccagcccttggagagccctgtggatctctacatc
ctcatggacttctcctactctatgtctgatgatctggacaacctcaaaagcatgggccaa
aacctagcggagttcctgcaagaactgacctccaattacaccattggatttgggaagttt
gtggacaaagtctcttcccctcagacagacatgagacctgagaagctgcgcgagccctgg
aacaacgccgactcccccttctccttcaagaacgtcatccgcctgaccagcaacatcaac
cacttcagccaggagctccggaaggagcgcatctccgggaacctggatgcccccgagggc
ggctttgatgccatcctgcagacagctgtttgcaaggataagattggctggaggaaggac
agcactcacctgctcgtgttctccaccgagtctgcctttcactatgaagctgatggtacc
aacgtcctggcagggatcctggcaagaaacgacgagcagtgtcacctggacagccgtggc
acctacgtctatgacaccaagcaggactatccttcagtgcccaccctggtgcgcctgttg
ggccaacacaacatcatccccatctttgctgtcaccaaccactcctacagctactacgag
aagctgcacaaatattttcccatctctgagattggggtgctccaggaggactcttccaac
attgtggagctgatccgtacagcctttgagcgcatccgctccaagatggacatcagggct
gacttcacccccagggccatgaagacagagttcacctcctcgatgtatgaaaagacagag
tctggctccttcctcatcacccgtggggaagtgggcaagttcaagatgcacgtgaaggct
ctcgagcacgtgggtgggcagcacgtgtgcagcctccctgagaaggaccggcagggagtt
atccaagtgaaacccacctccctgagcgacagcctcaccgtctcagcctcggtcgtctgc
gacgtgtgtccttgtgagcagcaacaagagctgaactcgcccaagtgcagcttccacggg
aacttcgtttgtgggcagtgcatctgccacccgggctggcgaggggacacgtgcgactgc
tccccggcgtcgtcccccgacaacgaagcctgcatccgccccggggacgtggagccgtgc
tcgggaaggggcgagtgcctgtgtgggaagtgccagtgctactctgaggacctggtgcag
cgcttcgacggggccttctgcgagtacgacgtcctgcagtgcccgcgcacctccggcttc
ctctgcaacgaccgtggccgctgctccaggggcgcgtgtgtgtgtgagagcggctggcag
ggcccgggctgtgagtgccccacgagcaacgacacctgcatcgacagcagagggggcatt
tgcaacaaccacgggaggtgcgaatgcggcagatgcatctgtgacatggcctcgctgtac
accagctccacctgcgaaatcagctactccctgggcttccaggctgtgtgcgagagcatc
cgggactgcgtccgctgccagacctggggaacgggcagcttgaaagggaactgcagcacg
tgccacctccagatccagatggtggaagagctgaagaaagaggaggctggcgagtactgc
tccttccaggatgaggatgatgactgcacctaccactactccctggagggagaccccagt
gtgctccccaacaccaccgtccgtgtgcagaagaacaaagagtgcccgcccaggagcttc
ttctggctcatcccgctgctcatcttcctcatcctgctcttggggctgctgctgctgctc
tgctggaggttctgtgcctgctgcaaggcttgcctggccctgcttccctgctgtgcacga
ggtcgcaccgttggcttcaaggaggaccactacatgcttcgacacagcctcatgtcctcc
gaccacctggacactcccctggtgcgcagtgggtccctcaaggggcgggacacggtccga
tggaagatccacaacaatgtccacaagcagggctttgcctcccccgctgccaccaacccc
aaggacctcattccctacgggctgtctctgaggctggcaaggcttttcacgcagaacctg
acgaagccggacacgcgggagtgcgagcagctgcgcaaggaagtggaggagaacctgaac
gatgttttcaagcacatccctggctgccacaagctccagcagaccaagttcaggttacag
cccaattctgggaaaaggcaggatcacaccattgtggacacagtgctcactgctcctcgc
tcagccaagccagacatcatcaaagcggtggaaaaacacgtgtcccacgaggctttcaac
gagctgaaggttgcgccgggttattacaccgtgacctcagaccaagatgctcaggggctg
gtggagttccaggaggccgtggagctggtggatgtccgtgtcccgctcttcatcagggag
gaggatgatgatgagaagcagctgcaggtggaggccatcgaggtccccaacggcatcgcg
aagattgggcgcagggttgtcaacatcaccatcatcaaagaacaagccagcagcctcatc
accttcttggagccagcctattcccacagccgctttgacaagctggccaagatccccgtc
cagcgggagatcatcgacaacgggaaatcccaggtcacgtacaggacccgggacctcacc
gccaagaacggcagggactatgtcttcacagagggcgaactggtcttccagcctggggag
acccgaaaggaggtgcaggtgcccttgctggagctgactgaaatagataccctcctgaac
agctgccagctcaagcaatttgccatcgacctcctccaccccaagtacggcgccaagatc
ggccgatacgcccaggccacggtgaccatcgccgacccagagctggtggatggtgtcccc
tcgatgactggcctgggccaagtcccccagtcccccaaaggtcgcctgagtgcaccactt
aatcccaatgcccgcgccctcagctccagggaaatcagcttcaactggtttcctccactg
ggaaaacctctggggtacaaggtgaaatactggatccaaggggaccctgagtcagaagcc
catctcattgatgtgaaaacaccaccagcagagctgagtaacctctaccccttctgtgac
tatgaaatgcaagtctgtgcctacaacgccctgggtgagggggtttactctgacatcatc
cactgccgcacactggaggaggtgcccagcgagcctggtcgcttggccttcaacgtcgtg
tcttccactgtgacacagctgagctgggctgagcctgcagaaaccaacggggacatcacg
gcttatgaagtcagttatggactcgtcaacgaggacaacatccccgtgggccccgtgaag
aaggtgctggttgaggacccgaagaagcgcatggtgctgattgaaaacctgcgggagtcg
cagccctatcgctacacggtgaaggccaggaacgctgctggctgggggcctgagagagaa
gccaccatcaacctcgccacgcagcccaagcgccccatgtccatccccatcatccctgat
gtccccatcgtggatgcagagggaggtgaggactacgacagctacctgatgtacagcacg
gatgtgctgcgctccccggccggcagcaagcgccccagtgtctctgatgattcaggctcc
aggtggaaatatgtgccgctgctgggagaagacttggaccttcgccgcatcacctggagg
ctcccacccgaaaccattccccgcctctctggcagcagccgcctctcctcggacaccgag
ggtctcctccctgaggaggacagcgacgtggccactggcagcgtgaggaggagcgggaca
ccccggccccaagcagagcacttgctgaacggccgggtagacttctccttccccggcagc
gccagtggctcgctgaccaggacagccaacaccagctaccaccagctgagctcccacgtg
caccaggagcacagggtgatggggagctcctcgctgacgagagactactccatggtgcag
atggggcatgattacccagggacactcctccctcccatccgtgaagatgctgggaggaca
atcccacggccccgggatgtgggtttcaggagcagggcaaaggtgaagggttactacccc
agcattggctgtcgggactctataatcatgactgatgggtccacagggatttgcaagtac
atagactccaggaagcctctgggcatccctgacacccccacacgcctggtgttctctgcc
ctgggacccacctccctgaaggtgagctggcaggagccgcgctgcgagaaggaggtgcag
ggctacagtgtgcagtaccagctcctcagcggaggagaggtgaacagaatcaccatcccc
aaccccagccagaactcggtggtggtagaggacctgctgcccaaccactcctacatcttc
aaggtgaaggcacagagtgaggaaggctggggccccgagagggaaggagtcatcaccatc
gagtcccaggtggacccgcagagcccgctcagtcctgtaccaggtacacccttcaccctg
agcaccccctgtgctcctggaccactggttttcacagccctcagcccagactcccttcac
ctcagctgggagagaccccgtgagcccaacgggcccatcctgggctacaggatcacctgt
gagatgctgcatggaggaggggagcccaggacaatctacgtcgaaggagacaatctggaa
accaccctgactgtgccccacctgagtgagaacgtgccatacaagttcaaagtgcaagcc
aacaccacccaaggctttgggccagagagagaaggcctcatcaccattgaatctcagaac
agaggtgctttctcccagtttggaggacagcagtacatgagggaagaagtgtacaaattc
cccaccgaatacactaccaaaaccagcatcagccattcctctctggatccccacttcaca
gacggaatgctcgtgacgagccagcgagtggagaacaccagcagcaccctcacccaggag
ttcgtgagccggaccgtgatgtccagtgggaccctcaccaagcaggtggagaggcagttc
tacgaagcctga
DBGET
integrated database retrieval system
