Empidonax traillii (willow flycatcher): 114063402
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Entry
114063402 CDS
T05887
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04020
Calcium signaling pathway
etl04080
Neuroactive ligand-receptor interaction
etl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
114063402 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114063402 (GRIN2C)
04082 Neuroactive ligand signaling
114063402 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etl04040
]
114063402 (GRIN2C)
Ion channels [BR:
etl04040
]
Ligand-gated channels
Glutamate (ionotropic)
114063402 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
114063402
NCBI-ProteinID:
XP_027751451
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MGRAPAHALLLSMVLGCSAAFTDLLLPGPEEPVVNVAVVFGGTSYPLHIRSRLSPQSFLD
MPLEIHPITVIVNNTNPSTLLTQICDILASHNIHGIVFEDNVGTEAVAQILDFISSQTQV
PIISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FLDVIRSFTDASYFGWELQEVLTFEMSQEQSSSRTQRLLRQIDAQVLIVYCSREEAEYLF
SMAEQAGLVGPGYVWIVPSLTVGNMEVPPASFPVGLISVVTESWKLSLRQKVRDGVAIIA
MGAASFFRAHGYLPEVGRDCWTPARTMATNASFYRHLLNVTWEHRDFSFNEGGYLVRPTM
VVITLNQHRLWEMVGKWEKGIIHMKYPVWPRYGSYMQPVVDNRHLTVATLEERPFVIVEN
TDPSTGVCVRNTVPCRKQTNSSRSGDGLVDPYTKLCCKGFCIDILKKLAKTVKFSYDLYL
VTNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVAR
SNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNQNLTSGKRPGGPTF
TIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYI
DTVSGLSDRKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTS
LKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLAL
LQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEH
LVYWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQTMGSPGRAPTPDVTASSAQANVLKML
QAAKEMVNTTSVGGSLEQATRTIEDWSNHSERLQTTFSLRTPQLVVQNSTGAHRAPSSGP
HPTERMGRAYTTKGAPPGLPLPQPIPVDSRLHGEENWRGANEHPRLLHPVKFWGGCAGDE
ALTGFPHLLVKTSTGRDYGEQVLVGNHIGAPLPPPTSPRDLPPPDIYREHKRPSGRGDRL
QNNPLLQGDGGHGGSGTLPRLLSAAEKKRDAGSLPPSCSRGAFPKVTRTCRARGEPARLE
AEREKLSRWASSARAPGERGEKRRPGGLRRCGATRPPARADVPDLFPEAEPGYGCGPRCP
QAAGRLAPRSPVTRLPSYREACRQNPRGTATAAHACMNSYANLPLFVGHLSQGSPPPREH
PGLHPCGRGAGRWDGGCRDCGRRGELALLRAVGAERRDLLVARGVASPCAGGSWRRVSSL
ESEV
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagcgccggcgcacgctctgctactgtcgatggtgctgggctgctcggctgcc
ttcacggacctcctgctgccgggccccgaggagccagtggtcaacgtggccgtggtgttt
gggggcacgtcctaccccctgcacatccgctcccgcctgagcccccagagcttcctggac
atgcccctggaaatccaccccatcaccgtcatcgtcaacaacaccaaccccagcaccctc
ctcacccagatctgcgacatcctcgccagccacaatatccacggcatcgtctttgaggac
aacgtgggcacggaggctgtggcccagattcttgacttcatctcctcccagacccaggtc
cccatcatcagcatcagcggggggtccgcagtggtcctgaccccaaaggagcctggatca
gctttcctgcagttgggtgtctccatcgagcagcaaatccaggtgatcttcaaggtgctg
gaggaatacgactggggctcctttgctgtcatcaccagcctctatccgggctacaacatc
ttcctggacgtcatccgctccttcacggatgccagctactttggctgggagctgcaggag
gtgctcacctttgagatgagccaggagcagagcagctccaggacgcagcggctcctgcgg
cagatcgatgcccaggtgctcatcgtgtactgctcacgggaggaggccgagtacctcttc
tccatggcagagcaagccggcctcgtggggccaggatacgtctggatcgtgcccagcctg
acggtgggcaacatggaggtgccacccgcctccttccccgtcggcctcatcagcgtggtg
acggagagctggaagctgagcctgcggcagaaggtgcgggacggggtggccatcattgcc
atgggggcagccagcttcttccgtgcccatggctacctcccagaggtgggacgggactgc
tggaccccggccaggaccatggccaccaacgcgagcttctaccggcacctcctcaacgtg
acgtgggagcacagggacttctccttcaatgaaggtggctacctggtcaggcccaccatg
gtggtgatcacactcaaccaacaccggctctgggagatggtgggcaagtgggagaaaggc
atcatccacatgaagtacccggtgtggccccgctacggctcctacatgcagcccgtggtg
gataaccggcacctgacagtggccacgctggaggagagaccctttgtgatcgtggagaac
acggaccccagcacgggggtctgcgtgcgcaacacggtgccctgccgcaagcagaccaac
tcctcccgcagtggcgacggcctcgtggatccctacaccaagctgtgctgcaagggcttc
tgcatcgacatcctgaagaagctggccaagaccgtgaagttctcctatgacctctactta
gtgaccaatggcaaacacggcaagatcgtccgtggggtctggaatggcatgattggtgag
gtgtactacaagcgtgcagacatggccatcggctccctcaccatcaatgaggagcgctct
gagatcgtggacttctccgtgcccttcgtggagacgggaatcagcgtcatggtggccagg
agcaacggcaccgtctccccctccgccttcctggagccttacagcccggccgtgtgggtc
atgatgtttgtcatgtgcctcactgtggtggccatcaccgtcttcgtgttcgagtatttc
agccccgttggctacaaccagaacctcaccagtggcaagaggccaggaggtcccaccttc
accattggcaagtcggtgtggctgctgtgggctctggtcttcaacaactcggtgcccatt
gagaaccccaagggcaccaccagcaagatcatggtgctcatctgggccttcttcgccgtc
atcttcctcgccagctacacggccaacctggctgcctttatgatccaggagcagtacatc
gacaccgtgtcggggctgagcgacaggaagttccagaagccgcaggagcagtacccccca
ttccgcttcggcaccgtccccaacggcagcaccgagaggaacatccgcagcaactacccc
gacatgcacacccacatggtcaagtacaaccagcgctctgtggaggacgctctcaccagc
ctcaaaatggggaagctggacgccttcatctacgacgcagcggtgctgaactacatggcg
ggcaaggacgagggctgcaagctggtgaccatcggcagcgggaaggtgtttgccaccacg
ggctacggcattgccctgcagaaggactcgcgctggaagcgggccatcgacctggccctg
ctccagttcctgggagacggtgagacccagaagctggagacagtttggctgtcggggatc
tgccagaatgagaagaatgaggtgatgagcagtaagctggacatcgacaacatggccggg
gttttctacatgctgctggtggccatggggctgagcctgctggtctttgcctgggagcac
ctcgtctactggaagctgcgtcactccgtccccaagtcccacaagcttgacttcctcctg
gccatcagcaggggcatctacagctgcttcaatggggtgcagaccatggggagccctggg
cgggcgcccacacccgatgtcacggccagctcggcccaggccaacgtgctgaagatgctg
caggcggccaaggagatggtgaacacgaccagcgtgggtggctccctggagcaggccacc
cgcaccatcgaggactggagcaaccacagcgagcgcctccagaccaccttctccctgagg
acaccccagctcgtggtgcagaacagcaccggcgcacaccgggccccctcctctggcccg
caccccaccgagaggatggggagagcctacactaccaagggtgctcccccggggctgccg
ctgccccagcccatccccgtggactcccggctgcacggggaggagaactggagaggggca
aacgagcacccccgcctgctacaccccgtgaagttttggggtggttgtgcaggagacgaa
gccctcacaggattcccccacctcttggtgaagacttccacagggagggattatggggag
caggtgctggtggggaaccatatcggggctcccctcccgccccccacgtcccccagggac
ctcccaccgccggacatctacagggagcacaagcggccgtcggggcggggggaccggctg
caaaacaaccccctgctccagggggacgggggacacgggggctcgggaacactgccccgg
ctgctgtcggcagcggagaagaagcgggatgcgggcagcctgcctccatcctgctctcgc
ggagccttcccgaaagtcaccaggacttgcagagccaggggcgagccggcgcggctggag
gcggagcgggagaagctgagccggtgggcgagctcggccagggctcccggggagcggggc
gagaagcggcgtcccggggggctgcggcgctgcggtgccactcgcccgcccgcccgcgcc
gacgtgcccgacctgttccccgaggccgagcccggctacggctgcggcccccgttgcccg
caggccgccggccggctggcaccgcgctcgcccgtgaccaggctgccgtcctaccgggag
gcttgccggcagaacccccgcggcaccgccaccgcggcccacgcctgcatgaactcctac
gccaacctgcccctcttcgtggggcacctctcgcaggggtccccgccgccccgggagcac
cccgggctgcacccctgcggccggggggccgggcgctgggacggcggctgcagagactgc
gggaggcgcggggagctggccttgctgcgggcggtgggcgcggagaggagggacctgctg
gtggcccgcggggtggcgagtccctgcgccggcgggtcctggcggcgggtctccagcctg
gagtcggaggtgtga
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