Empidonax traillii (willow flycatcher): 114063433 Help Entry 114063433         CDS       T05887                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism etl  Empidonax traillii (willow flycatcher) Pathway etl03040   Spliceosome Brite KEGG Orthology (KO) [BR:etl00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     114063433 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:etl03021]     114063433 (SF3B3)    03041 Spliceosome [BR:etl03041]     114063433 (SF3B3)    03036 Chromosome and associated proteins [BR:etl03036]     114063433 (SF3B3) Transcription machinery [BR:etl03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      114063433 (SF3B3) Spliceosome [BR:etl03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     114063433 (SF3B3)  Complex B     114063433 (SF3B3)  Complex C    U2 SnRNP specific factors     114063433 (SF3B3) Chromosome and associated proteins [BR:etl03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      114063433 (SF3B3)     TFTC complex      114063433 (SF3B3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  114063433 NCBI-ProteinID:  XP_027751495 LinkDB All DBs Position Unknown AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgttcctgtacaacctgacgctgcagcgtgccactggcatcagctttgccatccatggc aatttctcgggaaccaaacagcaagaaatcgtcgtttcccggggcaagatcctggagctg ctgcgccccgaccccaacacggggaaggtccacacgctgctgaccgtggaggtgttcggg gtcatccgctccctcatggccttcaggctgacggggggcaccaaggactacatcgtggtg ggcagtgactcggggcgcatcgtcatcctggagtaccagccctccaagaacgtcttcgag aagatccaccaggagaccttcggcaagagcggctgccgcaggattgtgccgggccagtac ctggctgtggacccgaagggccgcgctgtcatgatcagtgccatcgagaagcagaagctg gtgtacatcctgaacagagatgctgctgctcgtctcaccatttcctccccgctggaagcc cacaaggccaatactttggtgtaccacgtggtgggagtcgatgtggggtttgaaaacccc atgtttgcatgtctggaaatggattatgaggaagcagacaatgatccaacaggagaagct gcagccaacacacaacagacgctgacattttacgagctggacctgggtttgaaccacgtc gttaggaaatacagtgagcccctggaggagcacggcaacttcctcataacagttcctggt ggttctgatggccctagtggggtgctgatctgttctgaaaactacattacctacaaaaac ttcggcgaccagcctgacatcagatgcccaattcccaggaggaggaacgacttggatgac ccagagagaggtatgatttttgtctgctctgctacacacaagaccaagtccatgttcttc ttcctggcccagacagagcagggggacatcttcaaaattaccctggagactgatgaagac atggtgacagagattcgactgaagtactttgacactgttcctgtggctgctgccatgtgt gtgctgaaaacgggatttctcttcgtggcgtctgaatttggaaaccattacctgtaccag atcgctcacctgggggacgatgatgaggagccagagttttcctctgccatgcctctcgag gaaggagacacgttcttcttccagccacggcctctcaagaacctggtgctggtggatgag ttggacagtttgtctcctattctgtgctgtcagatagcagatttggccaatgaagacaca ccccagttgtacgtggcttgtggtcgggggcccaggtcgtctctgagagttttaagacac ggacttgaggtctctgaaatggctgtctcagagctgcctggtaaccccaatgctgtgtgg actgtcaggagacatgttgaagatgaattcgatgcctacatcatcgtgtccttcgtgaac gccaccctggtgctctctatcggagagactgtagaagaagtgactgactctggattcctg ggtaccacacccaccttgtcctgctctcttcttggtgatgatgctttggtgcaggtctat ccagatgggatccggcacatccgagcagataagagagtaaatgaatggaagacaccaggg aagaaaaccattgtgaaatgtgctgtgaaccagagacaagtagtgatagcactgactgga ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtacacagagaga aaggagatgtcggctgacgtcgtttgcatgagtctggccaacgttccccccggggagcag cgctcccgcttccttgctgttgggttggtggacaacactgtcagaattatctcccttgac ccttcggattgtttacagccgctgagcatgcaggcgctgcccgcgcagcctgagtcgctg tgcatcgtggagatgggcggcacggagaagcaggacgagctgggggagaggggctccatt ggctttctgtacctcaacatcggcctgcagaacggtgtgctgctgaggactgtcctggat cctgtcaccggtgacctctccgacaccaggaccaggtacctcggctcacggcccgtcaag ctcttccgtgtccgaatgcagggccaggaggcggtgctggccatgtccagccgctcctgg ctgagttattcctaccagtctcgcttccacctgacccccctgtcctacgagaccctggag tttgcatctggttttgcttccgagcagtgcccggagggcatcgtggccatctccacaaac acactgaggattttggccctggagaagctgggagcagtcttcaaccaggttgccttcccg ttgcagtacacaccccgaaaatttgtcattcacccagagagcaacaacctgatcatcatt gagacagaccacaatgcttacactgaggccaccaaggcacagaggaagcagcaaatggct gaggaaatggtggaggctgcaggtgaggatgagagggagctggctgctgagatggctgca gcctttctcaacgagaacctccccgagtccatcttcggtgctcccaaggcagggaatgga cagtgggcctctgttatcagggtgatgaaccccatccagggaaataccttagatctggtc cagctggagcagaacgaagctgccttcagcgtggccgtgtgccgcttctccaatactggg gacgagtggtacgtgctggtgggagtcgccaaggacctgatcctcaacccgcgctccgtt gccggggggtttgtctacacgtacaagctggtgaacagtggtgagaagctggagttcctg cacaagacccccgtggaggaggttcctgcagccattgccccgttccaaggccgagtgtta attggagttggaaagctcttgcgtgtgtacgacctcggcaagaagaaactgcttcggaaa tgtgagaataagcacattgccaactacatctgcgggatccaaaccatcgggcacagggtg attgtttctgacgttcaggagagtttcatctgggtgcgttacaaaaggaacgagaaccag ctcatcatcttcgccgatgacacctatccccgctgggtcaccacagcaaccctcctggat tatgacaccgtggctggagcagacaagtttggtaacatctgcgtggtgagattgcctccc aacaccaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacagaggg cttcttaatggagcatcacagaaggctgaagtgattatgaattaccacgtgggagagacg gtgctttccctgcagaagaccacgctgatcccgggaggctccgagtctcttgtctacacc accctgtcggggggcataggaatcttggtccctttcacttcccacgaggatcacgacttc ttccagcacgtggaaatgcacttacggtctgagcaccctcctctctgtggccgagaccat ctcagcttccgctcctactacttcccagtgaagaacgtgatagatggggacctgtgtgag cagttcaactccatggagccaaacaaacagaagaatgtggctgaggagctggaccggacc ccacccgaggtatccaagaagctggaagacatccgcacacgctacgctttctga

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