Empidonax traillii (willow flycatcher): 114063678
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Entry
114063678 CDS
T05887
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04510
Focal adhesion
etl04520
Adherens junction
etl04810
Regulation of actin cytoskeleton
etl04820
Cytoskeleton in muscle cells
etl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114063678 (VCL)
04520 Adherens junction
114063678 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114063678 (VCL)
04810 Regulation of actin cytoskeleton
114063678 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114063678 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
etl04812
]
114063678 (VCL)
04147 Exosome [BR:
etl04147
]
114063678 (VCL)
Cytoskeleton proteins [BR:
etl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
114063678 (VCL)
Exosome [BR:
etl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114063678 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
114063678
NCBI-ProteinID:
XP_027751914
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAI
RQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGGTPMAMQKAQQVSQG
LDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMAEARKVA
ELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNR
AVANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQ
DLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKTRMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAAKLGATAEKAAAVGTANKTTVE
GIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE
PDFPPPPPDLEHLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMM
MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASD
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacgcgcaccatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcatgaggagggggaggtggacggcaaggccatcccggacctc
accgcccccgtgtcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaggag
actgtgcagacaacagaagaccagatcttgaaaagggatatgccaccagcgtttatcaag
gtggagaatgcctgcactaaacttgttcgggcagcccagatgctgcaagcagatccttat
tcagtaccagctcgtgactatctaattgatggatcaagaggcatcctttctggaacatca
gacttgctgctgacatttgatgaagcggaggtccgtaaaatcatccgtgtctgcaaagga
atattggaatatctgactgtggcagaagtggtagagacaatggaggatttggtgacatac
acgaagaatctggggccaggaatgacaaagatggccaaaatgattgacgagagacaacag
gaattaactcatcaggaacacagggttatgctggtaaactccatgaataccgtgaaggag
ctgttgccagtacttatttcagctatgaagatttttgtaactacaaaaaattctaaaagc
cagggaatagaagaggccttgaaaaatcgcaatttcacagtagagaaaatgagtgctgag
ataaatgaaataatccgtgtattgcagctcacttcctgggatgaagatgcctgggcgagc
aagaaggacactgaagccatgaaaagagcattagccttaatagattcaaagatgaatcag
gcaaaaggttggctgagggatccaaatgcacctccaggggatgctggtgagcaagcaata
aggcagatccttgatgaagctggaaaagcaggagaactgtgtgcaggcaaagaacgcaga
gagattctgggaacctgcaaaactctggggcagatgacggaccagctggctgacctgcga
gccagaggacagggtggcacacccatggccatgcagaaagcacagcaggtgtcccaaggt
ctggacttgctcactgcaaaagtggagaatgcagcccgcaaactggaggccatgacaaac
tctaagcaggcaattgctaagaagattgatgctgctcagaattggcttgcagatcctaac
gggggcagtgaaggagaagaacatatccgaggaattatggctgaagcaaggaaagttgca
gaactgtgtgaggagcccaaagaaagagatgatatccttcgttccttgggggaaatctct
gctctgacagccaagctgtcagatctgcgacgacatgggaaaggtgactctcctgaggcc
cgtgcattggctaagcaaatagctacatcacttcagaatttacagtccaaaacaaacagg
gctgtggcaaatactaggccagttaaagcagctgtccatttggagggcaagattgaacaa
gctcaaaggtggatagacaatcctacagttgctgatcggggagtagggcaggcagcaatc
cggggtctggttgccgaaggtcgccgtttggccaatgtcatgatgggcccttaccggcaa
gatctgcttgccaagtgtgaccgtgtggaccagctggctgctcagctcgctgacctcgct
gccagaggggagggggagtctcctcaggccagggcaatcgctgctcagcttcaggactcg
ctgaaggatcttaaaacacggatgcaagaggcaatgacccaggaagtttctgatgtcttt
agtgacaccacaactcctattaaactgttagcagttgcagccactgctccctctgatgct
cccaacagagatgaggtgtttgatgaaagagcagcaaactttgaaaaccatgctgctaaa
ctcggagctacagcagaaaaagcagctgcagttggaactgcaaataaaactactgtggag
ggcattcaggcaacggtgaaatcagcaagggaacttaccccccaggtagtatcagctgct
cgtatcctcctgagaaatcctgggaatcaagctgcttatgaacattttgagaccatgaaa
aaccaatggattgataatgtagaaaaaatgacagggttggtggatgaagccattgacact
aaatctctgttggatgcatcagaagaggctattaagaaagatcttgataagtgtaaagtt
gcaatggccaacatgcagcctcagatgctggtagctggtgccaccagcattgcaaggcga
gcaaaccgcatcctgctggtggcaaagagggaggtggaaaattccgaagaccctaaattt
cgggaggctgttaaagcagcctctgatgagctaagcaaaactatatcacccatggtaatg
gatgctaaagctgtggcaggaaacatttctgatcctggtttgcagaagagtttcttggat
tctggatacagaattctgggagctgtggccaaagtcagagaagccttccagcctcaggaa
ccagattttccccctcctcctcctgatcttgagcaccttcatctgactgatgagcttgct
cctccaaaaccaccacttccagaaggtgaggttcctccacccagaccaccaccacctgaa
gaaaaggatgaagagttcccagagcagaaagcaggagaagcaattaatcagcccatgatg
atggctgccagacagctgcacgatgaagcccggaaatggtctagtaagggcaacgacatc
atcgcggccgcgaagcggatggcgctgctcatggccgagatgtcgcgcctggtgagaggc
ggcagcggcaacaagcgggccctcatccagtgcgccaaggatatcgccaaggcgtccgac
gaggtcacgcggctggccaaggaggtggcgaagcagtgcacggacaagcgcatcagaaca
aacctcctgcaggtctgtgagcgaatcccaaccatcagtacacagctgaaaattctctcc
actgtcaaagctaccatgctgggcagaactaatatcagtgatgaagagtcggaacaggca
actgagatgttggttcataatgcccagaatctcatgcagtctgtgaaggaaactgtgaga
gaagctgaagcagcatccattaagataagaacagatgctggattcactcttcgctgggtc
agaaaaaccccatggtatcagtaa
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integrated database retrieval system
