Empidonax traillii (willow flycatcher): 114063991
Help
Entry
114063991 CDS
T05887
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114063991 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114063991 (ATRX)
03036 Chromosome and associated proteins [BR:
etl03036
]
114063991 (ATRX)
Transcription factors [BR:
etl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
114063991 (ATRX)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
114063991 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
114063991
NCBI-ProteinID:
XP_027752433
LinkDB
All DBs
Position
Unknown
AA seq
2428 aa
AA seq
DB search
MTAEPVSESKLNTLVQKLHDFLAHSSEESEDANSPPALSINKSIGKRREPKGTPASMENN
RDEGSSSSERTKSLGLSRSKRKPTVVTKYVGSDEEQVVDETVNEDVSNENSENDVDMKSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEVPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKIK
VESEKSKIYDHAVKCSPKKNNANCNGEEKKLDNSYSGSLTYSYKALMVPKDLLKKTKKLV
ETTANLNSSFVSFLRNAAENVEISPAVRLCQLKAFKSVLSDMKKAHLALEEGLNVEIQAV
NVKIKDKNTKDKKTEVRSEKNEVKKDEGKEHVALKEDGTVQTPKKVVSEQADSEPMDQSV
PAVEQTDDKPTSGEEKKAGRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQ
MPSDEQDAGNTGTDHETPNSNTKSTTPVKDAKGSSKLKSSAKGTKELIVKLTPVSLSEAT
VKTEDRGNSSEKGNKDVHAKPRAENCDPVKQNHSAGSEPSTENEAAPVEDSDLRRSPRVK
TTPLRRPTDMSPLTSNSEEDSNDPSNEKRKGKPAKQPRRKNEKRNPPDGAADGPNPDNLS
KSEQPYVLDQSSDSEEMPAVLKEAGMMSRSSSDIDSNSEAPANDQKASGFPKNQPVKDEN
GKRKRKSSSSGSDLDAKRGKSAKNAAAAKKKRQNYSDSSNYDSELEKEIKMLSKIEAAKK
PKKKFSRKEDSYDSSEEEQRKKVSSKRKANWKKKKGKSSEEDDVEKSSPEKEMNHSSKDK
KVGKRSSAKEKITRDSKEKSPKGKRDEYSDAEKSSVEKEESSPEGNKEKDLKKKKAQEDS
SSESTEKSAKKEPKFESPKDRLKNKKGSESKAKKSDKLQKKSFKKEQDDSSSDGDKSSPE
KGSCNSSENDKIKKEPVFTEKRKLRERVAKKVNIDLSSDTEKSPQKEESSSEDATQRKKR
TETKEKKKISHKKKISKKEQNDSSSSDEESYEDSKKKTKRGPVKESKRGSLKKKVSKKKV
VVTSTSSSDKEENDEQNSTGDGSSDEQKIRPVTESLMLSAGAGFCQSSGDEGEALSRTIP
MEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDTSSDEEPEEGKKKPAKQTENTGDDGE
NEKEDNKSEKEESNSESDSEEEESSKKPRYRHRLLRHKLSMSEGESGEDKKVVKPKEKKE
GGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKK
RRRIRVQEDSSSENDNKSNSENEDNDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEE
RRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKP
HQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTA
LVVCPLNTALNWLNEFEKWQEGLEDEERLEVCELATVKRPQERSYMLQHWQDEGGVMIIG
YEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRR
RIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLADVRVMKK
RAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGGGNE
GGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSEETSVSL
SSDDYSKKKKSKGKKVKKESSSSESGSDNDVEVIKVWNSRSRGGGEGNAEDLSNNPSSTK
SDEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQ
SLISLDLIEDFLELANREKSDRDKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFN
DETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVY
RFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKK
KKRDTPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKK
GITMRFNMPAGTNVIPTNFNSQTYIPYNLGALSAMSNQQLEDLINQGREKVVEATNSVAA
ARIQPLEDIISSIWKENVTLTESQVQALALNRQASQELDVKRREAIYNDVLGKQQMLIGC
VQRILMNRRLQHQYNQQQQQQMSYQQAAMGHLMMPKPPNLIMNPSSFQGIDVRGMYQSVS
GGMQPPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7287 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagcccgtgagtgaaagcaagttgaacacattggtgcagaaactccatgac
ttcttggctcactcgtcagaagaatctgaggacgcaaactctcctccagcattgtctata
aacaaaagcataggtaaaagaagagaacctaaaggaactccagcttcaatggagaacaat
agagatgagggcagtagttcttcagaaagaaccaaatccttaggattatcccgttccaaa
aggaaacctacagttgtaacaaaatacgttgggtcagacgaggaacaagttgtagatgaa
actgtaaatgaagatgtttcaaacgagaactcagagaacgatgtagatatgaaaagcttg
cctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaagttcccaaaaag
cgtggagaggaaggactacatggaattgtaagctgtacagcttgtgggcagcaggtgaat
cattttcaaaaggattcaatctacagacatcctacactgaaagttcttatttgtaagact
tgctacaagtattacatgagcgatgacatcagccgtgattccgatgggatggacgaacag
tgtaggtggtgtgctgaaggtggaaatctgatttgctgtgacttttgccataacgccttc
tgtaaaaagtgcattttgcgcaacctgggtcgaaaggagctctcgactatcctggatgaa
aataaccagtggcactgctatatttgccatccagagcctttattggacttggtcactgcg
tgtgacagtgtctttgaaaatttagaacagttacttcaacaaaacaaaaaaaagatcaaa
gttgaaagtgaaaaaagtaaaatatacgaccacgcagtcaagtgttctccaaagaaaaat
aatgcaaactgtaatggtgaagaaaaaaaactagataattcatattcaggttcactaaca
tattcttataaagcactaatggtgccaaaagacttgcttaagaaaacaaaaaagctggtt
gaaactacagcaaatctcaactctagctttgtaagctttttgagaaacgctgcagaaaat
gtagaaataagcccagctgtgcgactgtgccagctgaaagcttttaaatctgtgctgagt
gacatgaaaaaagctcatctggcactagaagaaggtctgaacgtggagattcaagcagtg
aatgttaaaatcaaagataaaaataccaaagacaaaaaaactgaggttagatcagaaaaa
aatgaggtgaaaaaagatgaaggaaaggaacacgtggcattgaaagaggatggcactgta
cagacgcccaaaaaagttgtatcagaacaggctgacagtgagcccatggatcaaagtgtt
ccagcagtggaacagactgatgacaaacccacttctggggaagagaaaaaggctggcaga
aacgaagaacctcagtacgaaccgaacagtacagaggccttggacatggatatcgtgtcc
attccctcgtctgttcctgaagacatttttgagactctggaatctgctatggagattcag
atgccatcagatgagcaggacgctggaaatacaggaacggatcacgagactccaaattca
aacacaaaatcgaccactcccgtgaaagatgccaaaggcagtagcaagttaaaatcatcg
gcgaaaggaacgaaagaactgatcgtaaaattgactcctgtttccctctcagaggctaca
gtgaaaactgaagatcgaggcaacagttcagagaagggaaataaagacgttcacgcaaag
cctagggcagaaaactgtgatcccgtgaaacaaaaccacagcgccggcagcgaaccctcc
acggagaacgaggccgcgcccgtggaggactccgatctgcggaggtcgccccgcgtgaaa
accacccccctgaggcgccccacggacatgagccctctgacatccaactcggaggaggac
agcaacgaccccagcaacgagaagcgcaagggaaaaccggccaagcagccccggaggaaa
aacgagaagagaaatcctccggacggcgccgctgatggccccaaccccgataacctgtcc
aaatccgagcaaccgtacgttctggatcagagctcggattctgaggagatgccagctgtt
cttaaagaggcagggatgatgagtcgcagctcctcagacattgacagcaatagtgaggcg
ccagcaaacgatcagaaggcttcgggttttcccaagaatcagccggtcaaggatgaaaat
ggaaagcgaaaaagaaaaagctccagttctgggtcggatttagacgctaaaagaggcaaa
tcagctaaaaacgccgctgccgctaaaaagaagcggcaaaactattcggactcttcaaac
tatgattctgagttagaaaaggagataaaaatgttgagtaaaattgaggctgcgaaaaag
cctaagaaaaaattttcccgaaaagaggatagttatgattcctctgaggaagagcagagg
aagaaagtcagcagtaaaagaaaggcaaattggaagaaaaagaaaggtaaatcttctgaa
gaggatgatgttgaaaagtcttccccagagaaggaaatgaaccattcttctaaagataaa
aaagtgggtaagaggtcgtctgctaaggaaaagataaccagggactcaaaagaaaaatcc
ccgaagggaaaacgcgatgagtattctgatgccgagaagtcttcagtggagaaagaggaa
agttctcctgaaggtaacaaagagaaggatttgaaaaagaaaaaggcacaagaagattct
tcttcagagagcactgagaaatctgcaaagaaagagcccaagtttgagtctccaaaggac
aggctcaagaacaagaaaggatcggaaagcaaagcgaagaaatctgataaactgcaaaag
aaaagtttcaagaaagagcaggatgattcctcgtctgatggtgacaagtcctctccagag
aaaggaagttgcaattcttctgaaaacgacaaaattaaaaaggaacctgtgtttacagaa
aagagaaaattgagagagagagtagctaaaaaggtaaacattgatttatcctctgatact
gagaaatctccccaaaaagaggagagctcttctgaagatgccacgcagcgtaaaaaacgg
actgaaactaaagaaaagaaaaaaataagtcacaaaaagaaaatttccaagaaagagcag
aacgattcgtcctcttctgatgaggagtcttacgaagacagtaagaaaaagactaaaagg
gggccagtgaaagaaagtaaaaggggtagcttgaaaaagaaagtgtcaaaaaagaaggtg
gttgtcacttccacttcctcatctgataaggaagaaaacgatgagcagaattccacgggc
gatggaagcagcgacgagcagaagatcaggccggtgacggagagcttgatgctgtctgct
ggtgcaggattctgtcagtcatcaggagatgagggagaggctctatcaaggactattccc
atggaggaggaggaagatgatgatgatgacgaccctgagaatagaattgccaagaaaatg
cttttagaagaaatcaaagccaatctttcctctgatgaggatacatcttcagacgaagag
ccggaggaagggaagaagaaacctgcaaagcagactgagaacacgggagatgatggagag
aatgagaaggaagataataagtctgagaaggaagaaagtaattctgagtcggattcagag
gaagaagaatcatccaagaagcccagatacaggcacagactgctgaggcacaagctctcc
atgagtgagggggaatctggtgaagacaaaaaggtggtgaaaccaaaagagaaaaaagaa
ggggggaagcgtagaaatagaaggaaagtgagcagcgatgattccaatgactcggagttc
cacgagtccgcggtgagcgaagaggtcagcgagtctgaagatgaccagcgtccaaggaca
agatctgccaagaaagccgaagcagaagaaaaccagcgcagctacaaacagaagaagaaa
cgaaggcgaatcagggttcaggaggactcgtccagtgaaaatgacaataagagtaattct
gagaatgaggacaatgatgactcaaaatctcctggaaaaggcaggaagaaaataaggaaa
attattaaagatgataagctgagaacagaaacccagaatgcacttaaagaagaagaagaa
agaagaaaacgaatagcagagagagaacgggagagagagaaactgagagaggtgatagag
atagaagatgcttcacctctgaaatgtcccattacaaccaagctggttttagatgaagat
gaagaaaccaaagaaccattagtgcaggttcacaggagtatagttaccagactgaagcca
caccaagtagatggtgttcagttcatgtgggattgctgttgtgaatctgtaaaaaaaacc
aagacgtctcctggttctgggtgcattcttgctcactgtatgggcctggggaaaacgtta
caggtagtaagttttcttcacactgtcttgctgtgtgacaagctggattttcggacagct
ctggttgtgtgcccgctgaacactgccttgaactggctgaatgagtttgaaaaatggcaa
gaaggtttagaagacgaggaaagactagaggtctgtgagctggcgactgtgaagaggcct
caggagaggagctacatgctgcagcactggcaggacgaagggggggtgatgatcatcggc
tacgagatgtaccgaaacctggcccaaggcaggaatgtgaagagcagaaaacttaaagag
atattcaataaagctttggttgacccaggccctgactttgtggtttgtgatgaaggacac
attctgaagaacgaagcgtctgctgtctcgaaggcaatgaactctattcggtccaggaga
agaataattcttacaggaacaccactgcaaaataatcttatagaatatcactgcatggtt
aactttattaaggagaatttacttggttcaattaaggagttccggaatcggttcattaac
ccgatccagaacgggcagtgcgcagactccaccctggcagacgtcagggtgatgaagaaa
cgtgcccacatcctctatgagatgttggctggatgtgttcagaggaaagattacacagca
ttaacgaaattcctgcctccgaaatacgagtacgttctggaggttcggatgacacccatc
cagtgcaaactgtaccagtactacttggatcatctgacaggtgtaggtggtggcaatgaa
ggtggaagaggcaaagctggagctaagctgttccaggatttccagatgttgagcaggatc
tggactcacccctggtgtttgcagctggactatattagcaaagaaaataagggctatttt
gatgaagacagcatggatgacttcatagcttcagattcggaagaaacttcagtgagctta
agttctgatgattattcaaagaaaaaaaaatccaaggggaaaaaggtgaagaaagagagt
agctcaagtgaaagtggcagtgataatgatgttgaagtcattaaagtctggaattcaaga
tctcgtggagggggagaaggaaatgcagaagatctttcaaacaacccttcatcaacaaag
tcagatgaaggcaaagctacatcctcttccaaccctggcagcccagcaccagattggtac
aaagattttgtcactgatgcagatgctgaagtgttggaacattctgggaaaatggtgctt
ctctttgaaattcttcgaatggcagaggagcttggagacaaagtcctagtgttcagccag
tccctgatatctctggatttgatagaggatttcctggagctggctaacagggaaaaatct
gacagagataaacctcctatctataagggtgagggaaaatggttcagaaacatcgattac
tatcgcttggatggctcaactacagctcagtcaagaaagaaatgggctgaagaatttaat
gatgaaactaatgtgaggggccgcctgtttattatctccactaaagcaggttcccttgga
ataaacctggtggctgccaacagagtcatcatctttgatgcctcttggaacccatcctac
gacatccagagtattttcagggtctatcgttttgggcagaacaaacctgtgttcgtgtac
aggtttttggctcagggcacgatggaggacaagatctacgaccggcaggtgaccaagcag
tcgctgtcattccgcgtggtggaccagcagcaggtggagcggcacttcaccatgaacgag
ctcaccgagctctacaccttcgagccggacctgctggacgatcccaactcggagaagaag
aagaagagggacacgccgatgctgcccaaggacaccatcctggcagaattgctgcagatc
aacaaagagtacatcgttgggtatcacgaacatgattcactcctggaccacaaggaggaa
gaggagctcactgaggaagaaaggaaggcagcctgggcagaatatgaagcagagaagaag
ggcatcactatgcgtttcaacatgccagctgggaccaacgtgatccccacgaacttcaac
tctcaaacatatattccctacaatttgggtgctctgtcagccatgagtaaccagcagctg
gaggaccttataaatcaaggaagagagaaggtggtggaagcaaccaacagtgtggctgca
gcaagaattcagccccttgaggacatcatttcaagcatatggaaagaaaacgtaaccctc
acagagagccaagtgcaggccctggcactgaacagacaggcgagccaggagctggatgtc
aagcgccgagaagccatttacaacgacgtcctggggaaacagcagatgctaatcggttgt
gtccagaggatcctgatgaacaggcggctccagcaccagtacaaccagcagcagcagcag
cagatgtcctaccagcaagcagccatgggccacctcatgatgccaaagcctcccaattta
atcatgaatccttccagcttccaagggatagatgtgagaggaatgtatcagtcagtgtct
ggtgggatgcagccaccacccttacaacgagcaccacccccaatgagaggcaaaaatcca
gggccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
