Empidonax traillii (willow flycatcher): 114064230
Help
Entry
114064230 CDS
T05887
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
etl03037
]
114064230 (NPHP3)
Cilium and associated proteins [BR:
etl03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
114064230 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
TPR_10
NPHP3
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_19
NPHP3_N
TPR_11
NACHT
AAA_16
AAA_22
DUF2225
KAP_NTPase
AAA_19
14-3-3
TPR_6
AAA_14
Viral_helicase1
T2SSE
DUF627
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
114064230
NCBI-ProteinID:
XP_027752886
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MGTASSLVSPAGAVGEVIEDTYGGGEACEIPVEVKPKARLLRGSLRRVGGSRPGGLIGAS
FKSTASVQELECVAEYERLRKEYEIFRVSKNNEVASMVKKEAKLDRENKRLRAELQALQK
TYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKRELEA
KLQRLQAQGIQVFDPEESDSDDNCTDVTATGAQSEYWNGGALGSEPSMGSMMQLQQSFRG
PEFAHSSIDVEGPFANINRDDWDAAVASLLQVTPLFSHSLWSNTVRCYIISTDETQPEVN
ILIRNYSPKLQRVCETMGYFFQVVHFSSENERPLQDVRKWEIEKSSIVILLLHLTLPSCL
LEDCEEAFLRNPEEKPRLIYLRKEDDRVSSVSVQQLIEQISYVNKAKIIDHVGGVEEGAY
EIYSCVEKIIKQVEYMMHFYFERLNDLVAASAPIPPLLVSGGPGSGKSLLLSKWIQLQQK
HSPNTLILYHFVGRPMSTSSESALIIKRLTLKLMQHSWLVSPLTFDPAKLLEEFPRWLEK
LSARHHGSIIIIIDSIDQIQQAEKHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHL
DPLNFKDVKALISAECSSANVKLTKEQEKKLERHCRSATTCNALYVTLLGKTIACVGNTG
NIDEILQQCCQCQDTVSLYRLVLRSIQESLQSDKEKGLLREILCVIGVSHNGVSESELME
LYPELTSAVLASLLHSLHKMCLLTYGCGLLKFQHLQAWEMVKLEYMEEGENVISAYRQKL
VEYFTMQLSRDRVTWRSADELPWLFQQQNDKQKLHKCLLNLFVSQNLYKRGHFAELLSYW
QLVGKDKSSMAAEYFDSLKEYEKNCEGEESMICLADLYETLGRFLKDLGLLSQAVAPLQR
SLEIRETALDPDHPRVAQSLHQLAGVYVQWKKFGNAEQLYKQALEISENAYGAEHPRVAR
ELDALATLYQKQNKYEQAEQLRKKSFKIRQRAARQKGSLCGFALLRQRALQLEELTLGKD
TPDNARTLNELGVLYYLQNNLEAAELFLKRSLEMRERVLGSDHPDCAQSLNNLAALYNEK
KYYDKAEELYEKALDIRRRALAPDHPSLAYTVKHLAVLYKKMGKLDKAVPLYELAVEIRQ
KSFGPKHPSVATALVNLAVLYCQMKKQVEALPLYERALKIYEDSFGHMHPRVGETLKNLA
VLSYERGDFEKAAELYKRAMEIKEAETLLIGGKATSRHSSSGDTFSLKSALSPNIFLEHG
QR
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgtcgtccctggtgagcccggcgggcgcggtcggggaggtgatcgaggac
acgtacggcggcggcgaggcctgcgagatcccggtggaggtgaagcccaaggcgcggctg
ctgcgcgggtccctgaggcgcgtcggcggctcccggcccggcgggctcatcggcgccagc
ttcaagtccacggcctcggtgcaggagctggagtgcgtggccgagtacgagcgcctgagg
aaggagtacgagatcttccgcgtcagcaagaacaacgaggtggcctccatggtgaagaag
gaggccaagctggacagggagaacaagcggctgcgcgccgagctgcaggcccttcagaaa
acttaccagaaaatacttagggagaaggaaagtgccttagaagctaaataccaagcaatg
gagagagctgctacttttgaacatgatcgagacaaggtcaaaaggcaattcaagattttt
agagaaactaaagaaaatgagattcaggacttactgagggccaaacgagagctagaagca
aaactccagaggctccaggcccaaggaatccaagtgtttgatcctgaagagtctgattct
gatgataattgtacagatgttacagctactggggcacaatctgaatactggaatggagga
gcgttgggaagtgagccatccatgggtagtatgatgcaacttcagcagtctttcagaggg
cctgaatttgcccatagctccatagatgtggagggaccatttgcaaatataaacagagat
gattgggatgctgctgttgccagtttattacaggttactcctctgttttcccattctcta
tggagtaacacagtaagatgttacattattagtactgatgagactcaaccagaagtgaac
atccttattagaaactactctccaaaacttcaaagagtctgtgaaacaatggggtacttc
tttcaagttgttcatttttcatcagaaaatgaaaggcctcttcaggatgtaagaaaatgg
gaaattgaaaaaagttcgatagtcattttgctcctgcatttaactttgccaagttgtttg
ttggaggactgtgaagaagccttcttgagaaatccagaagaaaaaccccggttaatttac
ctcagaaaggaggatgacagagtcagttcagtctcggtgcaacagttaatcgagcaaatt
tcttacgtgaacaaagcaaagattattgaccacgttggaggtgtggaggaaggagcatat
gaaatctatagttgtgtggaaaaaataattaaacaggtagagtatatgatgcatttttat
tttgaacgtctaaatgacctagtagctgcatcagcaccaattccaccgctgcttgtatca
ggaggaccaggctctgggaaatctctcctcctgtcaaaatggattcaattacaacagaag
cattcaccaaacactctaattctttatcactttgttgggaggcccatgtctactagttca
gaatctgcgctgataattaaacgccttactttgaagcttatgcaacactcttggttagtg
tcacctctgacttttgatccagctaaacttctggaagaatttccccgttggctggaaaaa
ctttctgcacgccatcatggcagcattattataattattgattctattgaccaaatacag
caagctgagaagcatatgaagtggttgatagatccactgccagtgaacgtgagagtgatt
gtgtcagtgaatgtagaaacgtgtccccaggcctggaggttatggcccactcttcatctt
gatccactgaatttcaaagatgttaaagctctcattagtgcagaatgtagctctgcaaat
gttaaattgactaaagagcaggagaagaagcttgagagacactgtcgttctgccacaact
tgcaatgctttgtatgtcactctcttgggcaaaaccattgcttgtgttggaaatacagga
aatattgacgaaatccttcagcagtgttgccaatgtcaagacacagtgtcattgtacagg
cttgttctgagatcaattcaagaatcattgcagagtgataaagagaaaggtcttttgaga
gagatactgtgtgtcatcggtgtcagccacaacggcgtgagtgagtcagagctgatggag
ctttatcctgagctgacttctgcagtcttagcctcactccttcacagcctgcacaaaatg
tgtttgctgacatatggctgtggtttgctgaagttccagcacctccaggcttgggagatg
gtgaaactagagtatatggaagaaggtgaaaatgttatttctgcctatagacagaaacta
gtggagtatttcaccatgcagttaagtcgagaccgagtgacttggagaagcgcagatgaa
cttccctggctcttccaacagcagaatgataagcaaaagctacacaagtgtcttttgaat
ctctttgtatcccaaaacctttacaaaaggggacattttgcagaattgctgagttactgg
cagctggttgggaaagataagagctctatggcagctgagtattttgactctctgaaagaa
tatgaaaaaaactgtgagggagaggaaagtatgatctgcctggctgatctttatgagacc
ctgggacggtttcttaaggacctaggtcttctcagtcaggctgtagctcctctgcagcga
tctctggagattcgagagactgcgctggatccagaccaccccagggtggcacagtcactt
caccagctagcaggagtgtatgttcagtggaagaagtttggaaatgctgagcagctgtat
aaacaggcactggaaatctctgaaaacgcatatggagctgaacaccctcgtgtagcccgt
gaacttgatgcgcttgcgaccttgtaccaaaagcagaacaaatatgaacaggctgagcag
ctgaggaaaaagtccttcaaaatacggcaaagagcagcaaggcagaaaggcagtttgtgt
ggctttgctctcctgcgtcaaagagccctgcaattggaagagctcacgctgggcaaggac
acaccagataatgctcgaacccttaatgagcttggagtcctctactacctgcagaacaat
cttgaggcagcggagcttttcctgaagcgctccttggaaatgcgagagagagtcctggga
tccgaccacccggactgtgcacagtctttgaacaatctggcagccctgtacaatgagaag
aagtactatgacaaggccgaggagctctatgagaaagccttggacatcaggaggagagcg
ttagctccagatcatccctccttggcttacactgtgaaacacctggcggtgctgtacaaa
aaaatgggaaaacttgacaaggctgttcctctgtatgagctagcagttgaaattcgacag
aagtcatttggcccgaaacaccccagtgtagcaactgctctggtaaatctggctgtcctt
tattgtcagatgaaaaaacaggttgaagctttgcctctttacgaacgtgcattaaagatt
tatgaagacagctttggccacatgcatcctcgtgtgggggaaacactgaaaaacttggct
gtgctaagctatgaaagaggagactttgagaaggcagctgaactttacaagagagctatg
gaaataaaagaagcagagactttgttgataggtggtaaagcaacttctcgacattcatcg
agtggagacacattcagcttaaaaagtgcattatcaccaaatattttcctggaacatgga
caaaggtga
DBGET
integrated database retrieval system
