Empidonax traillii (willow flycatcher): 114064335
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Entry
114064335 CDS
T05887
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114064335 (RBBP6)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114064335 (RBBP6)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
U-box type E3
114064335 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
114064335
NCBI-ProteinID:
XP_027753080
LinkDB
All DBs
Position
Unknown
AA seq
1787 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETTFRSRSEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQQQQQQ
LPPPPPPPPPPLMRQTITRNLQPLLRPAMARQQDPLMIPLASLASRSALSSLGPGPSMAA
GLPVNPSSVVVSDLPPAVSLSLRGEKPDGPFRDADAVLPPLMAAAELSKSSPLSISSLLE
EKGYQVPVLRQPAIPSLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQA
PSLPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYSVPPPGYPP
APANMSSAWVPTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFA
KELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRS
YSRSPPYQRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVP
QGDAEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVG
AQPRPPVNRENFSPERFGPPGTRRENSPYARGRREEYAAGQSHRNRNIAGNYPEKPGRES
HGIKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPDAELLEGVRKPREPVPTE
DAKTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKIEKTKRKVEVAA
APKKDNVVKPAKASQEKLDPDREKSPRAEPPVKKPKEELPKTDSVKTSSSQKDEKALGTP
RKVHPKVAKDHPETRPAKEEKAKKEHPKEAKSEKPSSKEDKSKKPAEKSKPSDAKPEKRK
RKAEEKVDKEHEATSAKTSKPETAESKTSPKGKGEPEGEKGERTPEKDKAAFLNNPSKKI
KLNRETGKKIVSGENVPPGKEAVEKPESSSSKVKPEKTKGKARRKVTTADGASSTLVDYT
STSSTGGSPVRKPEEKPDTKRTVIKTLEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESE
EEDIKSTAQVPPTVGKPASVIKPVSVKTPNPLKHTEKEMEPLEKTQKAAKEASYESAQHD
AKSSKSSVSSEKGKTKDRDHSLSDKDTSEKRKSSVQPEKEHSERVAEQGNGKTISQSSKD
GRCSEKHDGGRGSAAKDFTPNRDKKADHDGSREHSSSKRRDEKSESARRKESPSRNRDST
AAQKSKPREEPPKKGPVEPKRSSYSPPRERKPAEHKAVHDSKRPGEEHKPPEKNPGKDKD
KDKDKEKHLPEVKSNKEKEAGGNKAPVKQESPEVKAEKETAAGQSAPGAAKPKPPVSSAA
RLSSDLTRETDEAAFVPDYNESDSESNVSAKEEEAAGKTPKEVKEKAVEKAKEEAAAPAP
AEQPEPGRSQSQSSPSVSRSRSHSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKH
KKHKKHKKHMGNEPELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtccactacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctccacatctccctgagcgacctcaagcgccagatcatgggccgggagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagagtacactgatgat
agtgccctgattcccaagaactcatcggtgattgtgaggagaatccccattggaggagtt
aaagccacaagcaaaacatacgttatgactcctaaatcgcacaaaatcctagaaactact
ttcagaagtcgaagtgagccagtgagtgggacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgag
gaggataaaataaaagctatgatgacacagtctggccatgaatatgatccagtcaattac
atgaagaaacctgtggggccacctccaccctcctatacctgctttcgctgtggcaaacct
gggcactacataaagaactgtccaacaaacggggacaaaaatttcgagtctgttcccaga
attaaaaaaagcacaggaattccaagaagttttatgatggaggtgaaggaccccaacaca
aagggtgccatgttgaccaacactgggaaatacgcaattccaaccatagatgcggaagct
tatgctataggaaagaaggagaagcctcccttcctacccgaggagccgtcctcctcctcg
gaagaggatgatcctattccagatgagctgttgtgtctcatctgtaaggatataatgacg
gatgcggttgttattccctgctgtggaaacagttactgtgatgaatgtattagaacagca
ttgctggagtctgaggaacacacatgcccaacctgccatcagacagatgtttctcctgat
gctttaatcgccaacaagttcctgcgccaggctgtgaacaacttcaaaaatgaaacgggc
tacacgaaaaggctccgtaagattcagcagcagcaacagcagcagcagcagcaacagcag
ctgcccccgccaccccctccaccgccaccccccctcatgaggcaaacgataacgcgcaac
ctgcagccgctgctccgcccggccatggcccggcagcaggatccactcatgatccctctg
gcgtccctggcttcccgctctgccctctcatccttgggccctgggccgtccatggcagct
gggctgccagtgaatccgtcttctgtggttgtctctgatctccctccagcagtgtccctc
tctctccgtggggaaaagccggatggaccttttcgcgatgccgatgctgtgttgcctcct
ctgatggctgcggctgagctttccaaatcgtcccctttgtcaatcagcagtttgttggaa
gagaagggctatcaggttcctgtactaagacaaccagcgataccaagtcttctgggccct
caaggacaatcaatacccacaactggtcatccaatgagagctggtgcacttcgcagacca
ggctgggaactttcaaatcgaggacgcccgcacagtgaccgtgcccaaaggactcaggcc
ccatcactgccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtatcct
ccaccaccccatgcacttcctcttcctccgggggtaccaccaccacagtttcctcctcag
tttccacctgggcagcctccatccgctgggtactctgtcccccctcccggatatccccca
gctcctgcaaacatgtcatcagcttgggtcccaacagcagtgccagcggctcattcaaac
accatcccaacgacacaagcacctcctctctctagggaggagttttacagagagcagcgg
aggcttaaagaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgct
aaggaattgatggaatataaaaagattcaaaaggagcgtaggcgttcgttttccaggtcc
aagtctccctatagcgcttcatcttactctagaagctcgtacacctactcgaagtcacgc
tcaggttcctcccgctctcgctcctactcgcgctcctttagccgttcccattcccgttcc
tactcgcggtcgccgccgtatcagaggagaggcaaagggaagagccggaactaccgctcc
aggtcccggtcccacgggtaccaccgctcgcgctcacgctcccccccgtacaggcggtac
cactcccgctccaggtccccggtgttcaggggccagtctcccacgaaacggactgtcccg
cagggggacgcggagcgggagtacttcaaccgctaccgggaggtccccccgtacgacatg
aaggcttactatgggcgctcagtcgacttccgagacccctttgagaaggagagatacaga
gagtgggagaggaactacagagagtggtatgagaagttctacaagggctatgccgtgggc
gctcagccacggcctccggtgaacagagagaacttctctccagaaaggtttggcccacct
ggcaccagacgagagaattcaccgtatgctcggggacggagggaggagtatgctgctggg
cagagccacagaaatcgtaatattgctggaaactaccctgaaaagcccgggagagagagc
catggcatcaaagatcctacaaaatcgaaagagaaggaggtggaaaatccactgggagat
ggcaaaggcaataaacataaaaaacaccgaaagagaagaaaaggggatgagaatgaagga
tttcccgatgctgagctgttagaaggggtgagaaaaccaagagagccagttcctacagaa
gatgctaaaacagactctctgttcatgctgccaagcagggatgatgccacccccgtgagg
gatgagcccatggaagcagattctattgctttcaaaccagtgtctgaaaaggagaaaaaa
gagaaggataagccaaaagcaaagatcgagaagacaaagcggaaagtagaagtggcggct
gctccaaagaaagacaacgtggtgaaaccagctaaggcttcccaggagaagctggacccc
gatcgcgaaaaatctcctcgagcagaaccgcccgtgaaaaaaccgaaggaggagctgcca
aagacagacagtgttaaaacctcttcctcacagaaagatgagaaagctcttggtacccca
cggaaagttcaccccaaagtggcaaaggatcacccagaaaccagaccggccaaggaggag
aaagcaaagaaagagcatccgaaagaagccaagtcagagaagccctccagcaaggaggac
aagtcaaaaaaacctgccgagaagagcaaaccttccgatgccaaacctgagaaaagaaaa
agaaaagcagaggaaaaggttgataaagaacatgaagccacttctgcaaaaacctctaaa
cccgaaactgcggaatcgaaaacatcacccaaggggaagggtgagcccgagggggagaaa
ggagagcgaacaccagagaaggataaagctgcttttcttaacaacccctccaaaaagatt
aaacttaaccgagaaactggaaaaaagattgtgagtggagaaaatgtgccacctggaaaa
gaagctgtggagaaacctgagtccagcagcagcaaagttaaaccggaaaagacaaaggga
aaagcgagaaggaaagtgacaacagctgatggagcaagttcaactctcgtagattacacc
agcacgagttctactgggggaagccccgtcaggaagcctgaggagaagccagacaccaaa
cgaactgtcattaagaccctggaggagtataacaacgacataacagcccctgctgaggat
gtcattatcatgatccaggtccctcagtccaagtgggataaagacgactttgaatctgaa
gaggaggacatcaaatccaccgcccaggtgcccccaactgtaggaaaacccgccagtgtt
atcaaacccgtgagtgtgaagacaccaaaccccctcaaacacaccgaaaaggagatggag
cctctggagaaaacacagaaagctgcgaaagaggcgagttatgagagcgcccagcatgat
gccaagagttccaaaagttccgtgtccagtgaaaaaggcaagaccaaagaccgggatcat
tctttgtcagacaaggacacttctgagaagaggaagagcagtgttcagccagaaaaagag
cactcagagcgtgtggccgaacaaggaaatggaaaaaccatttctcagtcttccaaagat
ggcagatgttcggagaaacacgacggtggccgtggctcggctgcaaaggacttcactccc
aaccgggacaagaaggctgaccacgacggcagcagggagcattcgagctccaagcgcagg
gatgagaagagcgagtcagcgcggaggaaagagtccccgtcccggaacagagactccaca
gcggcgcagaagagcaaacccagggaggagccgcccaagaagggccccgtggagcccaag
cgcagcagctacagccccccccgcgagcgcaaacccgcggagcacaaagccgtgcacgac
tccaaacgccccggcgaggaacacaaacctccggagaaaaaccccggcaaggacaaggac
aaggacaaggacaaagagaagcacctaccagaagtcaagagtaataaggagaaagaagcg
ggtgggaataaagcacctgtgaaacaggaatcgccggaagtcaaggcggagaaggagacg
gcggcggggcagagcgctccgggcgcggccaagcccaagcccccggtgagcagcgccgcc
cgcctctcgtccgacctcacccgcgagaccgacgaggccgcctttgtgccagactacaac
gagagcgacagcgagagcaacgtgtctgccaaggaggaggaggctgcagggaaaacgccg
aaagaagtgaaggaaaaggccgtggagaaggcaaaagaggaagcggcagccccggctccc
gctgagcagccggagcccggcaggagccagagccagagcagccccagcgtgagccgcagc
cgcagccacagcccctccgagagccagacccgcagccacagcagcagtgccagctcaggg
gagagtcaggacagcaagaaaaagaaaaagaagaaagagaagaagaagcacaagaagcac
aagaaacataagaagcataagaaacatatgggaaacgaaccagaattggaaaagagccaa
aaacacaaacacaagaagaaaaaatcgaagaagagcaaagataaagagaaagacgaccaa
aaagtgaaatctgtcacgacataa
DBGET
integrated database retrieval system
