Empidonax traillii (willow flycatcher): 114064708 Help Entry 114064708         CDS       T05887                                  Symbol COL17A1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism etl  Empidonax traillii (willow flycatcher) Pathway etl04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:etl00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     114064708 (COL17A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen DUF4869 Motif Other DBs NCBI-GeneID:  114064708 NCBI-ProteinID:  XP_027753797 LinkDB All DBs Position Unknown AA seq 1539 aa AA seqDB search MRMLSFLFTLYNSICIETRDSLELCGGNDMDSVTKKTRQDGSEVTERLITETVTTRLTSL PPKGGSSSGLKTSSHTGGSGVEKRTYTHGSSYVTSSGSGRLNSTSSSSGYRQAQSPSSTL TKSPGSTFERKTYVSRHATYEGSSSANSSPEFPRKDFASASTRGRSQSRESEIRVRLQSA SPSGRWTELDDVKRLLKGSRSASCSPTRSPSSTLPIPKKAVVETKMVTESSQSVSGTYDT TILNTALPSYMWSSTLPAGSSLGGYHNSSSLINAMSHSTGSVFGVPNNLAPSNHTLNAGL SSSSTVFGVQNNLSPGSSAMTQNATAASAAYGMKNMSQSNTTAGTAVSASAGGTVISQGD DVLRKDCKFLLLEKDNAPAKEMELLVMTKDSGKVFNASATGLNGGSFADDTLKKEKQGFS SSYATDTGLKSDANGGLKSMPKRDKETYAEIRSGDVGGAIGSAPSWCPCGSCCTWWKWLL GLLLAWLFLLGLLFGLIALAEEVRKLKSRVEDLEKINGGLLAINQGNSKIEKDARIDFLH GISPSSTFPYENEESVWLMVKSRLNKEMERGYFRGEKGERGEKGDMGAQGPKGDRGLPGV PGIPGPIGHQGPEGPKGQKGSMGEPGMEGPMGQRGREGLPGPRGEPGPPGSGEKGDRGAI GEPGPPGPPGPPGSAGLKGLMGSPGPQGPPGPPGLQGFRGEAGLPGAKGEKGASGPPGPK GDQGEKGSRGMTGEQGSRGMPGPPGEPGAKGPAGQAGRDGQPGEKGEPGLMGMPGVRGPP GPSGDAGEPGLTGPQGPPGLPGNPGRPGAKGEPGAPGKVISAEGSSTITLPGPPGPPGPP GPTGPPGVPGPVGPAGLPGQQGPRGEKGSAGETVVETIRTEVSSLASQMLGDLQGRAGPP GPPGPPGESVQGPPGPRGPPGLPGPPGPPGRLGSSMSTSEAFFTGPPGPPGPPGPKGDQG ERGPRGLTGEPGEPGLSAFSSHGERVTIQGPPGPPGPPGPKGDAGVPGAPGIPGASRGGS RQIQGPPGPPGPPGPPGPGGSSSQEIQQYVTDYLKSDNVRHYLTGAQGPPGPPGPPGVIT TADGMTLDYAELATRVMSYMTSSSGRYESFASSVSTTSTLYQELLDLLRREEIRQYLIGP QGPPGPPGPGGGGTSLSLDYDELTRRFISYLTSSGMSIGLPGPPGPPGTPGISYSDLTAY LRNSEFSGLVGPPGPAGPPGPPGIPGTPGTSLEDVSAYLQNVGYSSVSGVRGPPGPPGPP GPPGFSGTGLLSYADITHSDEFRSELIQYLKSDEVRSYISGPPGPPGPRGPPGPKGDSGF MSGSLSSSYQGLRTSERSHGGSLGAEGSHGGSLGTGSSYGSSMSRVSSYHTSGGSDGTYG ASMGGEGTFDGLLTEEESHSRSAGSSRSYSSSFTGSLDYNELALRVSESLQSQGILQDLM TYTAQGPAGPPGPPGPPGISKVFAAYGNVTADLMDFFRTYGAIQGPPGEKGERGYPGPKG DPGPMGPPGRQGHRGPKGEKGEKGEQVYVGRRKRRSAGV NT seq 4620 nt NT seq  +upstreamnt  +downstreamnt atgaggatgctcagttttctcttcaccttgtataactccatctgtattgagaccagagac agtcttgaactgtgtggtggcaatgatatggattctgtaacaaagaaaacaagacaagat ggatcagaagttaccgaaagacttattacagagactgtaaccacaagactgacgtccttg ccacccaaaggagggagcagcagtgggctcaaaacatcatcccacactggagggagtgga gtggaaaagaggacttacacccatggcagcagctacgtgacctcaagtggaagtggtaga ctgaattcaacatcatcatcctctggctacagacaagcccagtctcccagctctactctc accaaatcacctggctcgacatttgaaaggaaaacctacgtcagccgccatgcaacttat gaagggagctccagtgccaactcttcccctgagtttcccagaaaagattttgcatctgcc tccacaagagggaggagccaaagtcgagagagtgaaatacgagtccggctgcagagtgca tctccctctggcagatggacagagttggatgacgtgaaacgtttgctgaaaggaagtcga tcagccagctgcagccccacgcgatcaccatcaagtacactcccgatcccaaaaaaggct gtggtggagacaaagatggtcactgagagctctcagtcagtgtcagggacatatgacaca accatactgaatactgccctcccttcatacatgtggtcctccactctgcctgctgggtct tcccttggtggataccacaacagctcctccttgatcaacgccatgtctcactccacagga tcagtctttggtgttccgaataacctggctcccagcaatcatactctgaatgcaggcctg agctcttcctctacagtgtttggagtacaaaacaacctgtctccaggctcttcagccatg acccagaatgctactgcagcctctgcagcatacgggatgaagaacatgtctcagagcaac accacggcaggtactgctgtgtctgcctcagcaggaggaacggtcatctcccagggagat gacgttctgcgcaaagactgcaagttcctgctgctggagaaggacaatgccccagcaaag gagatggagctcttggtcatgacaaaggacagtggcaaagtctttaatgcctctgccact gggcttaatggaggatcctttgccgacgataccttgaagaaggagaagcagggattttcc tcctcttatgctacagatactggcctaaaatcagatgcaaatggaggactgaaatccatg ccaaaaagggataaagaaacttatgcagaaatacgaagtggtgatgtggggggtgcaatt ggatcagcaccatcctggtgtccctgtggttcctgctgtacctggtggaaatggctcctg ggtttgcttctagcctggttgtttctccttggattgctctttggactcattgctctggcg gaagaagtgagaaagctgaaatctcgtgtggaagacctggaaaaaatcaatggtggcctc ctggcaattaaccaagggaattcaaaaatagaaaaggatgctagaatagactttcttcat ggtatctcaccctcctcaaccttcccttatgaaaatgaagagtcagtctggctgatggtg aagagcagactgaacaaggaaatggaacgaggctacttccgaggggagaaaggagaacgt ggtgagaaaggtgacatgggagcacaaggtccaaaaggagaccgaggacttcctggtgtc ccaggaattcctggtccaattgggcaccaaggaccagaaggaccaaaaggacagaaaggc agcatgggtgagcctggaatggaaggtcccatgggacaaagaggtcgagagggtctacca gggcctcgaggggagccaggaccacctggatcaggagaaaaaggagacagaggtgctatt ggtgagccaggtcctcctgggccacctggacccccaggttctgctggcctaaaaggtctg atgggttctccaggcccacaaggtcctccaggtcctcctggcctacaaggatttagagga gaagcaggtctcccaggtgccaaaggtgagaaaggagccagtggacctcctggacccaaa ggtgatcagggtgagaagggttctcgtggaatgacaggtgaacaaggctcaagaggaatg cctgggcctccaggagagccaggggctaaaggtcctgcaggacaagctggccgtgatgga cagccaggtgaaaaaggtgaaccgggtctgatgggaatgccaggtgtccgaggccctcca ggaccctctggagatgcaggagagccaggtctcacaggaccccaaggaccgccaggactt ccaggcaacccaggccgaccaggggctaaaggagaacctggagctccaggaaaagtcata agtgctgagggctcatcaactattaccctgccaggcccaccaggtcccccaggcccacct ggccccactggacctccaggtgttccaggtcctgttggcccagctggtctccctggacag caaggtccacggggtgagaagggatccgcaggtgaaactgtggtagaaactatcagaaca gaagtctcgtcattagcatctcaaatgcttggagatttacaagggcgagcaggaccacca ggtccccctggaccaccaggtgaatctgtgcagggaccccctggacctcgtggtccacca ggattgccaggacctccaggtccaccagggagactgggatcttccatgtccacctcagaa gcattcttcacaggcccaccaggtccaccaggaccaccaggcccgaagggagaccaaggt gaacgaggtccacgaggactcacgggagaaccgggtgaacccggcctttcagcattctcc tcccatggtgaaagagtcaccatacagggtcccccaggcccgccaggcccacctggacca aaaggtgatgcaggtgtcccaggtgctcccggcatcccaggagcatctcgaggtggatcc agacaaattcaggggcccccaggacctcctgggccacccggtcctcctggcccaggtgga agttcatctcaagagattcagcagtatgtcactgactacctgaagagtgacaacgtcaga cattatttgactggtgcccagggcccaccaggccctccaggcccacctggagtcatcacc actgcagatgggatgaccctggattatgcggagctggctacccgtgttatgagctatatg acaagctcttcaggtcgctatgagtcatttgccagctcagtgtcaacgacatccactttg taccaagaacttttggacctgctgaggagagaagaaattcgtcagtatctcattggacct cagggcccaccaggacctcctggaccagggggaggtggcacatctctgtcactggattat gatgagctgaccaggcggtttatcagctacttgacaagttctgggatgagcattggactt cctggaccacctgggcccccagggactcctggtatatcctacagtgacctgacagcatac ctgagaaactccgaattcagtggattggtcgggccccctggtcctgcaggacccccagga cctccagggatccctggaacaccaggcacctctttggaggacgtctctgcctacctacaa aatgtgggatactcttctgtttctggagtccggggcccacctggccctcctggccctcca ggaccaccaggcttctcaggaactggccttttgtcctatgctgacatcacccacagcgat gagttcaggagtgagctgatccagtacctgaagagtgatgaagttcgaagctacatctca gggccacctgggccccctgggccaaggggaccaccaggacccaaaggagacagtggcttc atgtctgggtctctgtcttcatcctaccaagggttacggacttccgagcgctcgcacgga ggatcccttggtgctgagggctcccacggggggtcactgggcacaggcagctcctacggc agctccatgagcagggtgtcctcttaccacacctcagggggcagcgatggcacttatggt gcctccatgggtggtgaggggactttcgatgggttgctgacagaggaggaatcccacagc aggtcagcaggttcgagcagatcctatagcagctccttcactggttccctggattacaac gagctggcactccgtgtgtcagagagcctacagagccaaggtattctccaggacctgatg acttacactgcacagggacccgcaggtcccccaggccctcctggtccccctggcatcagc aaggtctttgcagcctacggcaatgtcactgcagacctcatggacttctttagaacatat ggtgccatccaggggccacctggtgaaaaaggagagaggggttatcctggacccaaaggt gaccctgggccaatgggcccaccaggacgacaagggcacaggggaccaaaaggagagaag ggagagaaaggtgaacaagtgtatgttggcagaagaaaaagaagaagtgctggggtttaa

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