KEGG   Empidonax traillii (willow flycatcher): 114064715
Entry
114064715         CDS       T05887                                 
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
  KO
K24223  cilia- and flagella-associated protein 43
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:etl03037]
    114064715 (CFAP43)
Cilium and associated proteins [BR:etl03037]
 Motile cilia and associated proteins
  Tether/Tether head (T/TH) complex
   114064715 (CFAP43)
SSDB
Motif
Pfam: CC_Cfap43 Beta-prop_THOC3 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_IFT122_1st Beta-prop_EML CFAP43_N Beta-prop_WDR5 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_ACSF4 WDR55 Beta-prop_WDR3_1st CFAP251_N Beta-prop_VPS8 WD40 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 114064715
NCBI-ProteinID: XP_027753819
LinkDB
Position
Unknown
AA seq 1688 aa
MADAVAVARAGAAAAPGAMAAGPGSGRDALEVSWVQGFSNKNFGFINNQTVCYPRGNYIL
FLDLETKKTTALQCETGPVGAFAANASSEVVAFSDRKLNPIIHIHHFPELNKLTELKGSA
QLDYTLLAFSFTGPYLASYSSIPEFVLSVWNWQENILLCSESQPGITATSLSFNPINWQQ
LCFVGESSVTIWHIERIKDEHHLKRNPVELPDEQGSISPHEDLFFPVSRSDDPYHGPDLP
VSAIAGLVGDEAETFVPRNSIKTFVHPTAYCWTATSEIYMGCKEGYILAIDADKHSVSIL
QPKPPPEYMQKISDVVSYVRREVQKKKGGKLNDLQKPIFSMAFCNEGLYAAGRDGILLFY
HIKDLQYEMKVCADISQPISSLIFSPDYASLLLATDQGPVYSYKPAHSGEAVKLLDTCSS
CFLAADFLTPGNKYCVSVTVAGEVQVWLLEDGTCLGKLNLDTEATAMACCPSSNSVAVGT
RRGQIYFLDVTKAEAPRVVHRIFLSDFPVLSLHYDQSGQFLIARTTEGHVFILDARPSKL
FQVLGYIVLADEVLDLSVVSDFKNDLVEVMVLLNVAEVQRARLEIFCLSSAITTDNDKCV
NDQGMFNASVLKNKQYELDYPLRSAVKLKDNIVYGYCTCAPFICKYHLSEENMSEDPPVF
SSEQRIPSNQFGSGFLCVSPNSQWLAAAAKDGVLFIYNTSTMDILAQKHCHSYQGGGIRS
VTFSMDGNFILVNDANDGALVCLKWKKIKKTEVEEATFYWQSLLDTLNKSISDENVVLKS
MAEWQFDPGSTSKSLAEEKFKEASLKSPGVDGTEEDGNVTNTNDMTWIGQKIQKVIREET
QRFANQKEELQTGIKKLRKTIQKMMHENEQVPDIEKLEHQEFNLDMEEQEKLQAEAEQEV
ARARKEIEMENLANCYLQDFIKYECWDAMCVKGCAVKCFHMDCEVKNYPLQERSKEELET
LGKVLRLKDSETADLKVQKEDLEAEAETEEEGEKEAKAVADDGESFCLIGSLSSQYGGDT
SILYHQRDLHTKEQRVNQIVLLKDIIYKVKTAFNKEFDIVAQQKEQEIARVKERNLRIRE
ILEQLGLQVEVWEPTLTDDEMPERALTVQDSEIKAEKFLTQEEKEKAEMLAKLEMEKRLA
ATDDDRLRALDDMMGGVLEVRKEDILKMEIPPPPFISKPEDLWNDEEKRLFGEYERKVKE
LNEEKEEYKQTLENEWKKLEASIQETTRNFDETVCKLSERKVKSDMVIYQEELKIVNLTC
DLLLDEELDTREAGLYNCLTKKKKEKVKKAKTILTAKNKVDAYTATYKDAVDEEKNLERR
FPKQFADIPDDLFDELFQLYSSRPKNPRTEILLDTANPYGNCSDSEDYKDALTLLMKAMD
ELDSPEHMPEGLEQSTWEKFCQARRNKMESEELVKWKALKLAEMQAFFQRRTDENEKMKS
QIENIFKELTWLQEKKMKLQQNLIVQFVLKQGQVELKSTEIPDYSDAILIKKSVVEELNS
SILTQGEKKIAAIIEFKEFSRGIRQLEWEHKKMRMQIEDLKEKARDIVILPISKDCQLFL
TVLNYDSHIAQHIAGMEETLRFMDKLHKKNVKNHQKKIGELKKCIRLKEEANYELSLQLK
EMLVSVSERRNIFEAADTRDISEKITRQRYQEILKQKNLRDLIKEQKEEFESLQSELEIL
RARRPPHI
NT seq 5067 nt   +upstreamnt  +downstreamnt
atggcggacgccgttgctgttgccagggcaggggcggcagcggcgccgggggcgatggcg
gcggggccgggctccggccgggacgcgctggaagtgagttgggttcagggattctcaaac
aagaactttggctttatcaacaatcaaactgtctgctacccccgtggtaattacatcctc
ttcctggacctggaaacaaagaagacaacagcactacagtgtgagacaggccctgtggga
gccttcgcagcaaatgccagcagtgaagtggtggccttttccgaccggaagctgaatccc
atcatacatatccaccatttccctgaactgaataaactgacagaattaaaaggtagtgct
cagctggactacaccttacttgcgtttagtttcacaggcccatatctagccagttactcc
tccatcccagaatttgttctttcagtatggaactggcaagaaaatatcctcctgtgcagt
gagtctcagccagggataacagcaacctctttaagttttaaccctataaactggcaacaa
ctgtgttttgttggtgagagctccgttaccatctggcacattgaaaggattaaggacgag
catcaccttaagcgaaaccccgtggaactccccgatgaacaagggtccataagtcctcat
gaggatttgtttttcccggtttctcgtagtgatgatccataccatggccctgatttgcca
gtctcagccattgcaggactggtaggagatgaagcagaaacatttgtgcctagaaatagt
attaagactttcgtgcatcccactgcctactgctggactgcaacctcagaaatatacatg
ggctgtaaagaaggatatattttggcaattgatgctgacaaacacagcgtttctattctt
caaccaaaacccccacctgagtacatgcagaagatatcggatgtggtgtcatatgttcgt
agagaagtacaaaaaaagaaaggtggcaaactaaatgatctgcaaaaaccaatattttcc
atggcattctgtaatgagggattatacgcagctggaagggatggcattttattgttttat
cacatcaaagatctgcagtatgagatgaaagtctgtgctgatatctcacaacccatatct
agcctcatattctctcctgattacgccagtctgctgcttgccactgaccagggaccagtt
tatagttacaaacctgcccacagtggagaagctgtcaaactcctggacacatgcagcagt
tgttttctggcagctgattttcttactccagggaacaagtactgtgtgtctgtaacagtt
gcaggtgaagtacaagtttggctcctggaagatggaacttgccttggcaagctaaacctt
gatactgaggcaactgctatggcttgctgtccctcctccaacagtgttgctgtagggacc
agaagaggtcaaatctatttccttgatgttaccaaagctgaagctccacgggttgttcac
agaatttttctttccgactttccagtgctgtctttgcattatgatcagagtggccagttc
ctcattgcaagaactacagaaggacatgtctttattctagatgctcggccatcaaaatta
ttccaggttctgggatatatagtgttggcagatgaagtgcttgatctttctgtagtttct
gacttcaagaatgacttagttgaagtgatggtccttcttaatgtagcagaggtccaacga
gcacgactggaaattttttgtctctcttcggcaatcacaacagataatgataagtgtgtg
aatgaccaaggaatgtttaatgctagtgtccttaaaaacaagcagtatgagctggattac
cctttgagatcagcagtcaaattgaaggataacattgtgtatggctactgtacctgtgca
cctttcatctgtaaataccatctctctgaagagaatatgtcggaagatccaccagtattt
tcatcagaacagaggattcctagcaatcagtttggatcaggtttcctctgtgtatcaccc
aacagccagtggctggcagcagcagcaaaagacggcgttttatttatctacaatacttct
actatggatatacttgctcaaaagcattgtcactcatatcaaggaggaggaatcagatcc
gtgacattttcaatggatggcaatttcatccttgttaatgatgcaaatgatggtgctctg
gtgtgtctgaaatggaagaagataaagaaaaccgaagttgaggaagctactttttactgg
caatctcttcttgatacactgaacaagtctatttcagatgaaaatgttgttttaaaatct
atggcagaatggcagtttgacccaggatccacatcaaaatcgcttgcagaagagaaattt
aaggaggcatcactgaaatctcccggtgtagatgggacagaagaagatggaaacgtcaca
aataccaatgacatgacatggataggtcagaaaatacagaaggtcatcagagaagagact
cagaggtttgctaaccagaaggaagagctgcaaacgggaattaaaaagctgcgtaaaact
attcagaaaatgatgcatgagaatgagcaggtgccagacattgagaaactggagcaccag
gagttcaacctggatatggaagaacaggaaaaactgcaagcagaggctgaacaagaagtg
gccagggcgaggaaggagattgagatggagaatttagccaactgctatttgcaggatttc
atcaaatacgagtgctgggacgctatgtgtgtaaaaggatgtgcagttaagtgcttccat
atggattgtgaagtgaagaattatccactgcaggaacgtagtaaagaagagctggaaact
ttggggaaagttctccggttaaaggatagtgagacagctgatcttaaggttcagaaggaa
gatcttgaagctgaggctgagactgaggaagaaggagagaaggaagcaaaagctgtggct
gatgatggtgaatctttctgcctgattggaagtctgagctctcagtatggtggagacaca
tctatcctatatcaccaacgtgacttgcacaccaaggagcagagagtcaatcagatagta
ttattgaaggacatcatttacaaagtgaaaactgcttttaataaggaatttgacatagtt
gcacaacaaaaggagcaggagatagcacgagtgaaagaaagaaacctgaggatccgagaa
atcttggaacaactgggcctccaagtggaagtgtgggagccaactcttacagatgatgag
atgccagagcgagcactcactgttcaagattcagagattaaagctgagaaattcttgact
caagaggagaaagagaaagcagaaatgctggctaagctggaaatggaaaaacgccttgca
gctacggacgatgacagactgcgtgctcttgatgacatgatgggtggagtgctggaagtc
agaaaggaagacatcctgaaaatggaaattcctccacctccttttatatccaagcctgaa
gatctttggaatgatgaagaaaagagactatttggagaatatgagagaaaagtcaaggaa
ctgaatgaagagaaagaagagtacaaacaaacactggaaaatgaatggaagaaacttgaa
gcttccatccaggaaacaacacgaaattttgatgagactgtctgcaaactctctgaaagg
aaagtgaaatcagacatggtcatctaccaggaagaactcaaaatagtcaatctcacttgt
gatttactgttggatgaagagctggacactagagaagctggactttataactgccttaca
aaaaagaagaaagaaaaagtcaagaaggcaaaaacaatcctgactgcaaaaaataaagtt
gatgcttacacagccacctataaagatgcagtagatgaagagaagaatctggaacgccgt
tttccaaagcagttcgctgatattcctgacgatctctttgatgaacttttccaactttac
tcaagtcgaccaaagaacccaaggacagaaatactccttgacacagctaatccatatggg
aactgttcagactctgaggattacaaggatgcacttacccttttaatgaaagccatggat
gaactggatagtcctgagcacatgcctgaaggcttagaacagtctacatgggaaaaattt
tgtcaggcgagacgaaataaaatggagagtgaggagctggtgaaatggaaggcccttaaa
ctggcagagatgcaggcctttttccagagaagaacagatgaaaatgagaagatgaagtca
caaatagagaacattttcaaggaactcacttggctgcaggagaagaagatgaaacttcag
cagaatttgattgtccagtttgtgctaaaacaaggacaggtggaattgaaaagtactgag
atcccagactactctgatgctattctcattaaaaagagtgttgttgaagaactgaattcc
tctatcttgactcaaggagaaaaaaaaattgctgctataatagaattcaaagagttctct
agagggatacgtcagctggaatgggagcacaagaaaatgagaatgcaaatagaagatctg
aaagagaaggctcgggacattgtaatactacctatttcaaaagattgccagctattccta
actgtgctgaactacgacagccacatcgcccagcacattgcagggatggaggagactctt
cgcttcatggataagttgcacaagaagaatgtgaaaaaccatcagaaaaaaattggagag
ctgaagaagtgcatccgtttaaaagaggaagccaactacgagctgagcctgcagctgaag
gagatgcttgtctctgtttcagaaaggaggaatatctttgaggcagctgacacacgggat
atttctgaaaagattacaaggcagcgttaccaagagattttgaagcagaaaaacctacgg
gatcttataaaggaacagaaagaagagtttgaaagtctgcagtcagaacttgaaatactg
agagcaagaagaccccctcatatataa

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