Empidonax traillii (willow flycatcher): 114064758
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Entry
114064758 CDS
T05887
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114064758 (CHD7)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114064758 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
114064758
NCBI-ProteinID:
XP_027753878
LinkDB
All DBs
Position
Unknown
AA seq
3011 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPMDQGFPSLQSSLHHPTAN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMISNAPGNGIASPHSQYHNPQVPHSSGAGGQM
GVYPGMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQQQPPQPTQPPQAPSGPP
GQGHPQHMQQMGNYMARGDFSMQQHSQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHLSH
VPQQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQ
TVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNS
GQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGS
AGIPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQNRPFMGMSSTPREMGGHMRP
NGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGIHHQSSPPPHPHHQ
PWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGPNTQLVKSDDYLPSIEPQPQ
QKKKKKKNNHIAAEGPSKGFGKEDFPGGLDSQNLSRNSVDCSQEEKKKKKKPKAKKEPKD
PKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKASNKKQDSETSAAKKKVNKGK
EGSENSDLEKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAG
RDSPSNTSQSEQQESADAEGPVVEKIMSSRSVKKKMENGEEVEIEEFYVKYKNFSYLHCQ
WASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDFSRSTDDNGE
PVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDWKKSESS
REYKNNNKLREYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIYLKGIHGPF
LVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHA
IITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQN
TVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLA
PKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLIN
GAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCL
DILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAAD
TCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVL
QSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTIT
IESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVR
KQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGWG
RWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRAL
VNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNKVL
LRVRMLYYLRQEVIGDQADKILEGADSSEVDVWIPEPFHAEVPADWWDKEADKSLLIGVF
KHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKP
TRTPFKDEIDEFANSPPEDKEESIEIHSNKHSESNADLGQLYWPNTSTLTTRLRRLITAY
QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVST
FGIIFDPVKHQFEWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPDLS
TMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKDL
LIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGTGNTNTVSSVNPLGAGCSQTPPIV
PSTPVQEEKTMEQTESKVEGSENPAAKEKPDIKEETDIADKDTKPDCDAETEPGSVKCEL
KDIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGAVSQGKNFDEESNASMST
ARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQ
MFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQASVSGSEDITASPRLSKEDALNLSVPR
QRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNF
SSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRRKN
VEGLDLLFMSNKRTSLTVEDAEVTKAFEEDMEALPARNIPSPGQLDPDTRIPVINLEDGT
RLVGEEAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLDI
NTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPES
MFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTSL
QNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLLNN
PITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTDTVSATDSANGSVSAAT
AATTAPATTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAG
LQNAVGSNEEKATEKTEGAAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSLDG
GEEIENNENDE
NT seq
9036 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatggtaatattttcagtgaaggg
ttggaaggtcttggagaatgtggatatcctgaaaatacagtgaatcctatggggcagcaa
atgcccatggatcaaggatttccctctttacagtcatctcttcatcatcccactgcaaat
caaaatcaagccaagttgacccattttgatcactataatcaatacgaacagcagaaaatg
cacctgatggatcagccgaacaggatgataagcaatgcccctgggaatggtatagcgtct
cctcattcgcagtatcacaaccctcaggttcctcacagcagtggtgctggtggtcagatg
ggagtctatcccggcatgcagaacgaaagacacgggcaacccttcgtagacagtggctcc
atgtggggaccacgggcagttcaagtgccagaccagataagagcaccgtaccagcagcaa
cagcagcagcagcagccgccgcaaccgacacagccgccccaggcaccctccggaccccct
gggcagggccatcctcagcacatgcagcagatgggaaactacatggctcgtggtgatttt
tcaatgcagcagcacagtcagccgcagcagcagaggatgaaccagttctctcaaggccaa
gaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttgtctcat
gtgccccagcagaatcccagtatggcaccttctttgcgacactcagtccagcaatttcac
caccatccccccactgctctccatggagaatcagtagcccacagtcccagattctcccct
aatcctccccagcagggtgctgttaggccgcaaacacttaattttagttctcggagccag
acggtaccctcacctactataaacaactcagggcagtattctcgatatccttacagtaac
cttaatcagggattagttaataatacagggatgaatcagaatttaggccttacaaataac
actccaatgaatcaatctgtaccaagatacccaaatgctgtcggatttccatcaaacagt
ggtcaaggactaatgcaccagcagcccatccaccctagtggctcacttaaccaaatgaac
acgcaaactatgcacccttcacagcctcagggaacttatgcctctccacctcccatgtca
cctatgaaagcaatgagtaatccagcaggtacacctcctccacaggttagacctggtagt
gctggaataccaatggaagttggcagttacccaaatataccccatcctcaaccgtcacac
cagccccctggtgccatgggaattggacaaaggaatatgggcccccgaaacatgcaacag
aatcgtccatttatgggtatgtcttcaacaccacgggagatgggtgggcacatgagacca
aatggttgtccaggtgttggccttgcagatccacaagcaatacaagagcgactaatatct
ggccagcaacttcctagtcaacagcagtcttttcaacagcaaatgccaacctgtcctccc
atgcagcctcatccagggatacatcaccagtcttcaccacctccacatcctcatcatcag
ccttgggcacagcttcaccagtcaccacaaaacacaccacaaaaagtgcctgtccttcag
cattctccgtcggaaccctttttagagaaaccagtgccggatatgactcaggttagtgga
ccgaatacccagctagtgaaaagcgatgattatctgccgtcaattgagccgcagccacag
caaaagaaaaagaaaaagaaaaacaatcacattgctgcagaaggtcccagcaaaggtttt
ggtaaggaggactttcctgggggacttgacagccagaatctaagcagaaattcagtggat
tgctcccaagaagagaagaagaaaaagaaaaagcccaaggcaaaaaaagaaccgaaggat
cctaaagaacccaaggaaaagaaggaacccaagacccccaaagtccctaagacccctaaa
gagccaaaggaaaagaaagcaaaaaatactacgccaaaacccaagaccagcaaaaaggct
agtaacaagaaacaagattcagaaacaagtgctgcgaagaaaaaggttaacaagggaaag
gaaggttcggaaaactcagatttggagaaaactccaccaccatcacctcatcctgaagat
gaagatgacccaggggttcagaagcgacgctccagtaggcaggtgaagaggaagcgttac
acagaagacctggagttcaagatttcagatgaggaggctgatgatgctgatgctgctgga
agagactctccttcaaatacttctcagtcagagcaacaggaatctgctgatgctgaaggt
cctgttgtggagaaaatcatgagtagccgttcagtgaagaaaaagatggagaacggagag
gaggtagaaatagaggaattctatgtaaagtacaaaaacttttcttaccttcactgtcag
tgggcatctgtggaagagctggataaagacaagagaattcagcagaagattaagcggttt
aaggcaaaacagggccagaacaaattcctttcagaaattgatgatgagctttttaatcca
gattatgtggaagttgatcgaatcatggatttttcacgtagcacagatgataatggagag
cctgtaacgcattatctggtgaaatggtgttcgcttccttatgaagacagcacttgggag
ctcaagcaagacatcgaccaagctaagatcgaagaatttgagaaactgatgtctagggag
ccagaaatggagcgtgtggagagacctcctgccgatgactggaagaaatcggagagttcc
agggagtataaaaacaataacaaactcagggaataccagttggagggagtaaactggctt
cttttcaattggtacaacagacgaaactgcattttagcagatgaaatggggttgggaaag
actatccagtccattacgtttctctatgagatatatttgaaaggaatccacggtcctttc
ttggttattgcaccgttgtccacaattcccaactgggaaagggagttccgcacctggaca
gagttaaatgtggttgtgtatcatgggagtcaagcaagtcgacggaccattcagttgtat
gaaatgtatttcaaagatccacagggtcgtgtgataaaggggtcctacaagttccatgcc
attatcacaacattcgaaatgatcttgactgactgcccggagctgcgtaacattccatgg
cgttgcgtggtcattgatgaggcccacaggctgaaaaacaggaactgtaagcttttggaa
ggactcaagatgatggacctggaacataaagtgctgcttactggaacccctttgcaaaat
actgtagaagagctatttagcttgcttcacttcttggaaccaggtcgcttcccatcagaa
accacattcatgcaagaatttggggatcttaaaactgaagagcaggtgcaaaaactccaa
gctatattgaagccgatgatgctgagacgtctcaaggaggatgtagaaaagaacctggcc
cccaaagaggaaactatcattgaagttgagctgacaaatattcagaagaaatactatcgt
gctattcttgaaaagaatttcacatttctttccaagggtggaggtcaggcaaatgtacct
aatcttttaaacactatgatggaactaagaaaatgctgcaatcatccataccttattaat
ggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctccagat
tttcagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctgctg
ccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttg
gacatactggaagactacctcattcaaagacggtacccatatgagcgaattgatggccga
gtaagaggcaacttgcgtcaggcagctattgacaggttttcaagacctgattctgatagg
tttgttttcctgctgtgtacaagggccggaggtttgggcattaatcttactgctgctgat
acctgcatcatttttgattcagactggaacccccaaaatgacctccaggctcaagcacga
tgtcacagaatagggcagagcaaatcagtgaaaatttacagattgataacaaggaattct
tatgaaagggaaatgtttgacaaagctagcttgaagttgggccttgataaggccgtgctg
caatctatgagcggaagagaaaacgctacaaatggggtgcaacagctttctaaaaaagaa
atagaagatcttcttcgaaagggggcatatggtgctctgatggatgaggaagatgaagga
tctaagttttgtgaagaggatattgatcagattctcttaaggcgaacacacacaattact
attgaatctgaaggaaaaggctcaacatttgcaaaggctagttttgttgcatctgggaac
aggacagacatttctttggatgaccctaatttttggcagaagtgggcgaagaaagctgag
ctggatattgatgctctaaatggaaggaataacctagttattgatacaccaagagtgaga
aagcaaaccagactctacagtgcagttaaagaggatgaactgatggagttttcagacttg
gaaagtgattctgaagaaaagcctagcacaaagccccgtaggcctcaggacaaatcacaa
ggttatgcaagaagtgaatgtttcagggtggagaagaacttgttggtttatggctggggt
cggtggactgacatcctctcacacgggcgctataaacgtcagctaacagaacaagatgtg
gaaaccatctgccggactatcttggtgtattgtcttaatcattacaaaggggatgaaaat
atcaaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcgagctttg
gttaatcattccggtctgtctgcaccagtgcccagagggaggaaagggaagaaagtaaaa
gcccagagttcacagccaatgctgcaagatgctgattggctcacaacctgtaatccagat
gtattatttcaggaagacagctataggaaacatctcaaacatcactgtaataaggtcctg
ctgcgtgtccgcatgctctactatctacgacaagaagttataggggaccaagcagacaag
atcttagagggtgctgactcaagtgaagtagatgtgtggatacctgagccattccatgcc
gaagttcctgcagactggtgggataaggaggcagataaatcccttttaattggagttttt
aaacacggttatgagaagtacaattctatgagagctgatccagcactgtgctttctggaa
cgggttggcatgcctgatgcaaaggccatagctgctgaacagagagggacagacatgtta
gcagatggcggtgatgggggtgaatttgacagagaggatgaagacccagaatataagcca
accagaactcctttcaaggatgaaattgatgaatttgcaaactcacctccagaagacaaa
gaagaatccatagaaatacactcaaataagcacagtgaaagcaatgctgacttaggccaa
ctctactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattactgcctat
cagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccgcagg
agacgtcggcctcgagaagaagtgagggcactagaagcagaaagggaagctataataact
gaaaaacgacaaaaatggacaagaagagaagaagctgatttttatcgtgtggtgtcaact
tttggaataattttcgatcctgtcaaacatcaatttgagtggaatcaattcagagcattt
gccaggcttgataaaaagtccgatgaaagcttggaaaagtattttaatggctttgtgaat
atgtgcagacgagtgtgccgaatgccagtcaaaccagatgatgaaccacctgatctttcc
acaatgatcgagccaatcacagaagagcgtgcttctagaactttatatcgcatagaactg
ttgcggaaaatccgtgaacaggttctccatcacccgcagctgggggagaggctaaaactt
tgccaaccaagtttggacctgccagagtggtgggagtgtggtaaacatgacaaagactta
ctgattggtgctgctaaacatggagtcagtaggacagattatcacattctgaatgatcct
gaactctcttttcttgaggctcacaagaactttgctcaaaacagagggacaggtaataca
aatactgtctcttctgtaaaccctctgggtgctggctgcagtcaaacaccacctattgtc
ccatccacaccagtacaagaagaaaagactatggaacaaacggagtctaaagttgaaggg
tctgaaaatccagcagccaaagaaaagcctgatatcaaagaggagactgatattgcagat
aaggacactaaaccagactgtgatgctgagactgagcctggctctgttaaatgtgaattg
aaagacatagaaatgagtacagatgtagatccaaaatctatttctgagaaaggttcagaa
gaagatgaagaggagaaactggatgatgatgataaatcagaagaatcctcccagcctgaa
gcaggagcagtttctcagggtaagaattttgatgaagaaagcaatgcctctatgagtact
gcaagggatgaaacacgtgatggattctacatggaagatggggatccctctgtggtgcag
ctgcttcatgagagaacatttgccttctctttctggcctaaggaccgagtaatgatcaac
cgattagacaacatctgtgaagcagtgctgaaagggaagtggccagtaaataggcgccag
atgtttgatttccaggggcttatacctgggtatactccaacagctgtggacagccctctg
caaaaaaggagctttgcagagctctccatggttggtcaagccagcgtcagtggcagtgaa
gatatcactgcttctcctcggttatcaaaggaagatgcactcaatttatcagttccacgt
cagaggaggaggagacgaagaaagattgaaattgaggctgagagagctgccaagaggaga
aatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcagaaaacggacaa
gaaaaggttgtagatttatcgaaggcctcacgagaggcaacaagttctacctcaaatttt
tcgtctgttacttcaaagtttatcttgcctaatgtctccacacccgtgtctgatgccttt
aaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcatctacta
aatggctctttaatagatggagaaccgcccatgaagaggaggagaggaaggaggaaaaat
gtagaagggcttgatctgttatttatgagcaacaaacggacatcgttgactgtagaggat
gcagaagtgaccaaagcttttgaagaagatatggaagccctaccagcaaggaacattcca
tctcctggtcaattagacccagacactcgcatccctgtaatcaatctagaggatgggacc
aggctggtgggagaggaggctccgaaaaacaaggatttagttgaatggcttaaattgcat
cctacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctgttttcc
ccatttcagaagccgaaacaaaaacgacacagatgtcgaaaccctaataaactggatata
aacaccttgacaggagaggaaagggtacctgttgtaaataaacgaaatggaaagaagatg
ggtggagctatggcccctccgatgaaggacttgccaagatggctggaagaaaatcctgaa
tttgctgttgctccagattggactgacattgttaaacagtctggttttgttccagagtcc
atgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcagaagagga
agaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagcatcaact
tcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcacaagcctc
cagaacctacagaacctgcagtctctccagctcgcaggcctcatgggctttccgccaggg
ctagcaacagctgctgctgctgggggggacgctaaaaatccggctgccatgttgcctctg
atgttgccagggatggcaggattgcccaatatgtttggactaagcggattgttgaataac
cccataacagctactactggaaatgccactactgcttccggtcaaggagagactgaggat
ggcgcttcaaaagctgaagagaagaaaaatgagaatgaagaggagaacaaagactctgag
aaaagcacagacactgtttctgctactgactctgcgaatggatctgtcagtgctgctact
gcggcaactaccgcccctgccaccactactaccaccaccaacactggattgcccacaaac
cctctggccttcaatccttttctgctgtctaccatggctcctggcctcttctatccatct
atgtttctacctccaggactgggaggattgactctgcccggcttcccagcactagcagga
cttcagaatgcagtgggctccaatgaagagaaggctactgaaaaaactgaaggagctgcc
tttaaagatgaagaaaatctcgaaggcagtgatgcagaggagagccttgataaaactgca
gattcctccgttttagaagatgaaatagcacagggtgaagaattagactcacttgatggg
ggggaagaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
