Empidonax traillii (willow flycatcher): 114064839
Help
Entry
114064839 CDS
T05887
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04517
IgSF CAM signaling
etl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
114064839 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114064839 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
etl04812
]
114064839 (SPTBN1)
Cytoskeleton proteins [BR:
etl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
114064839 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
114064839 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
114064839
NCBI-ProteinID:
XP_027754020
LinkDB
All DBs
Position
Unknown
AA seq
2360 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASQLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLTGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLIVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPT
PEPGPKAEDADSQQQWDGTKGEQVSQNGLPSDQESPRVAETADTNEMVNGAAEQRTSSKE
SSPVPSPTSDRKAKTAVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWH
NVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGN
EYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGK
REKDKEKDKEKRFSLFGKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacggtagcgacagactacgacaacattgagatccaacagcagtacagcgat
gtcaacaaccgctgggatgtggacgactgggacaacgagaacagctctgctcgcctgttc
gagcgctcccgcatcaaggccctggctgatgaacgtgaggcggttcagaagaagaccttc
accaagtgggtgaactcccacttggcacgtgtgtcgtgccggattacagacctgtacact
gaccttcgggatgggaggatgctcatcaagctgctggaagttctctcaggagagagactc
cccaaaccaactaaaggaaggatgcgcatccattgcctggagaacgtggataaagccctc
cagttcctgaaagagcaaagagtgcacctggaaaacatgggatctcatgatattgtggat
gggaatcacaggctgactctgggccttatctggactattatcctgagattccagatccaa
gatatcagtgttgaaactgaggacaacaaagagaagaaatctgctaaagatgctttgctt
ctgtggtgccagatgaaaacagctggttaccccaacgtcaacatccacaacttcacgaca
agctggagggacgggatggccttcaacgcactgatacacaagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaacgcttttaacctt
gcagagcaacaccttggtcttaccaagctcctggaccccgaggatatcagtgtcgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacctattaccactacttctccaagatg
aaagctctagctgttgaaggaaaacgtatcggcaaggtgctcgacaatgccatcgagacg
gagaagatgatcgagaaatacgagtcgctggcctccgacctgctggagtggatcgagcag
accatcatcatcctcaacaaccgcaagttcgccaattccctggtgggggtgcagcagcag
ctgcaggccttcaacacctaccgcaccgtggagaaaccccccaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaggtg
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaacgagctcatcagacaagagaaactg
gaacaactcgcgcggagattcgatcgcaaggcggccatgagggagacctggctgagcgag
aaccagcgcctcgtgtcccaggacaactttggctttgacctgccggcggtggaggctgcc
accaagaaacacgaggccattgagacggacatcgcggcctacgaggagcgcgtccaggcc
gtggtggcggtggccaaggagctggagaccgagaactaccacgacatcaagcgcatcacc
gccaggaaggacaacgtcatccgcctctgggagtacctgctggagctgctgcgcgcgcgc
agacagcggctcgagatgaacctcggcctgcagaagatcttccaggagatgctgtacatc
atggactggatggacgagatgaaggtgcttctgctgtcccaagactacggcaaacatttg
ttgggagttgaagacctgctgcagaaacatgctctggtggaggctgacattggcatccag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccaccgatggagaaggg
tacaagccgtgtgacccgcaggtgatccgggaccgcgtggcacacatggagttctgctac
caggagctgtgccagctcgcggccgagcgccgggcacgcctcgaggagtcccggcgcctc
tggaagttcttctgggagatggctgaggaggagggttggatcagggagaaggagcagatc
ctgtcgtccgacgactacggcaaggatctcaccagcgtggtccgactcctgagcaaacat
aaggcgtttgaggacgagatgagtggccgcagtggccacttccagcaggcgataaaagaa
ggtgaagacatgatcgcggaagagcactttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggccaacctggagcagttatctgccatcaggaagaagcgcctg
gaggaagcctcccagcttcaccagttccaggctgacgccgacgatatcgacgcgtggatg
ttggacatcctcaaaattgtgtccagcaacgacgtcggccacgacgagtactccactcag
tccttggtcaagaagcacaaggatgtggccgaggagatcgccagctaccggcccaccatc
gactcgctgcacgagcaggccaaggccctgccgcaggagcacgccggatccccggatgtg
cagggaaggctgaccggaatcgaggagagatacaaagaggtcgctgagctcactcggctg
cgcaagcaggccctgcaggacaccctggctctttataagatgttcagcgaggcagatgct
tgtgagctttggattgacgagaaggagaagtggctgaataacatgcagattccagagaag
ctggaggacctggaagtgatccagcacaggtttgagagcttggaaccggagatgaacaac
caggcgtcccgcgtggccgtcgtgaaccagatcgccaggcagctgatgcacagcggccac
cccagcgagaagatcaaagcacagcaagataaactcaacaccaggtggagccagttcaga
gaactggtggataggaagaaggatgctctgctctccgctctcagcatccagaactaccac
cttgaatgtaacgaaaccaaatcctggatcagggaaaagaccaaagtgatcgagtccacc
caagacctgggtaacgacctggcgggggtgatggccctgcagaggaagctgacgggcatg
gagcgggacctggtggccatcgaggccaagctcagcgacctgcagaaggaggcggagaag
ctggagtctgagcaccctgaccaggcacaggccatcctctcgcggctggcagaaatcaac
gacgtgtgggaggagatgaagaccaccctgaagaaccgggaggagtccctgggagaggcg
agcaagctgcagcagttcctgagggacctggatgacttccagtcgtggctctccaggacg
cagaccgccatcgcgtccgaagacatgcccaacaccctgacggaggccgagaagctgctc
acccagcacgagaacatcaagaacgagatcaacaactacgaggaagattaccagaagatg
agggacatgggggagatggtgacgcaggggcaaaccgacgctcagtacatgttcctgcgc
cagcgcctgcaagccttggacaccggatggaacgagctccacaagatgtgggagaacagg
cagaatctcctttcccagtctcatgcctaccaactgtttctcagagacaccaagcaagca
gaagcctttcttaataaccaggagtacgttctggcacacacagagatgcccaccaccttg
gaaggagcagaggctgccattaaaaagcaggaggacttcatgaccacgatggatgccaat
gaggagaagatcaatgcagttgtggagactggcaggaggctcgttagcgatgggaacatt
aactctgataaaatccaggagaaagtggactccattgatgacagacataggaagaaccgt
gaagcagccagtgagcttctgatgagactgaaggacaacagggacctccagaagttcctt
caggattgtcaagagctctccctgtggatcaatgaaaagatgcttacagcccaggacatg
tcctatgatgaggcaaggaacctgcacagcaaatggctgaagcaccaggcatttatggca
gagctcgcatccaacaaagagtggctggagaagattgagaaggagggaatgcagctcatt
gcagagaaaccggagaccgaggccgtggtgaaggagaagctgacgggtctccatcagatg
tgggacgagctggaatccaccacccagaccaaggcccagcgtctgttcgacgcaaacaag
gccgagctcttcacccagagctgtgctgacctggacaagtggctcaatggcctggagagc
caaattcagtccgatgactacgggaaggatctcaccagcgtcaacatcctgttgaagaag
cagcagatgctggagaatcaaatggatgtccgtaagaaggagatcgaggagctgcagagc
caggccagggctttgagccaggagggcaagagcacagatgaagtcgatggcaaacgcctt
attgtagaaaagaaattcttggagctgctggagcctctgaatgagagaaaagcaaacctg
ctggcctccaaagagatccaccagttcaacagggacgtggaagatgagattctgtgggtc
ggagagaggatgcccatagctacatccactgatcatggacacaacctccagactgtgcag
ctgctgataaagaagaaccagacccttcagaaagagatccagggccaccagcctcggatc
gatgacatttttgagaggagtcagaacatcatcacagagagcagccccaatgctgaagtg
atccagcagagactggcagacctgaagcagctgtggaacctcctcatcgaggagacggag
aagcgccacaagcgcctggaggagtctcacagggctcagcagtactacttcgatgcggcc
gaggccgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagccaag
gatgaacagagtgccgtgtccatgctgaagaaacaccagattttggaacaagctgtagaa
gactatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagacaac
cacccagaaagcgagcgcatcagcatgcggcagtccaaggtggacaagctgtacgccggc
ctcaaggacctggccgaggagaggagaggcaagctggacgagagacaccgcctgttccag
ctcaaccgcgaggtggacgacctggagcagtggattgcggagagggaggtggtggcggga
tcccacgagctgggccaggactacgagcacgtcacgatgctgcaggagcggttccgggaa
ttcgcccgagacaccgggaacattggccaggagcgtgtggacactgtgaaccacatggca
gacgaactcatcaactcgggacactcagatgctgccacgatcgcagagtggaaggacgga
ctcaatgaggcctgggctgacctcctggagctcatcgacacgagaacacaaatcctcgca
gcctcttacgaactgcacaaattttaccacgatgccaaggagatcttagggcgtattcaa
gacaaacacaagaaactgcccgaggagcttggcagagaccaaaacacagtggaaacacta
cagagaatgcacacgacgtttgagcacgatatccaggccctgggcacccaggtgaggcag
ctgcaggaggatgccgcgcgtctgcaggccgcctacgccggggacaaggccgatgacatc
cagaagagggagaacgaggtgctggaggcctggaaggcgctgctggacgcctgcgagggc
cgcagggtgcggctggtggacacgggagacaagttccgcttcttcagcatggtccgggac
ctcatgctctggatggaggacgtcatcaggcagatagaggcccaggagaagccgagggat
gtgtcgtctgtggagctgctgatgaacaatcaccagggtatcaaggcggagatcgatgca
cggaacgacagcttcaccacctgcatcgagctgggcaagtctctgctggccaggaaacac
tacgcctccgaggagatcaaggagaagctgctgcagctgacggaaaagagaaaagaaatg
attgacaaatgggaagacagatgggagtggctgagactgattctggaggtgcaccagttc
tccagagatgccagcgtggccgaggcctggctgctgggacaggagccctacctgtccagc
cgggagatcgggcagagcgtggatgaagtggagaagttaatcaagcggcacgaggccttt
gaaaagtccgcggccacctgggacgagaggtttgcagcgctggaaaggctgaccacgctg
gagctgctggaagtgcgtcggcagcaggaggaggaggagcggaagaggcagccgcccacc
ccggagcccggccccaaggcagaggatgcagactcccagcagcaatgggatgggacaaaa
ggagagcaggtttcccagaacggtttgccctcagaccaggagtctccacgggtggcagaa
accgcggacacaaacgagatggtcaatggagctgcggaacagaggacgagttccaaagag
tccagtccggttccttccccgacgtcagaccgcaaagccaagaccgctgttcaggcccag
actgctgctacccttccagccaaaacccaggagatcccttcagctcagatggagggcttc
ctacaccgcaagcacgagtgggagacacacagcaagaaagcctccagcaggtcatggcat
aacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggactccaaagctgct
gcctctggcatcccctaccacaacgagatccccgtgagcctgaaggacgcggtctgcgaa
gtggcggtcgactacaagaagaagaagcatgtgttcaagctcagattgaccgatggcaac
gaatacctcttccaagccaaagacgatgaggagatgaacacgtggatccaggccatcaca
tcagccatctcgtcggacaagatcgaggtgtccccgaccacccagagcactccagcctcc
agccgtgcccagaccctgcccgccagcgtcacaataaccagcgagtccagccctggcaag
cgggagaaggacaaggagaaagacaaagagaaaagattcagcctttttggtaaaaagaag
tga
DBGET
integrated database retrieval system
