Empidonax traillii (willow flycatcher): 114064880
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Entry
114064880 CDS
T05887
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etl03016
]
114064880 (TARBP1)
03036 Chromosome and associated proteins [BR:
etl03036
]
114064880 (TARBP1)
Enzymes [BR:
etl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
114064880 (TARBP1)
Transfer RNA biogenesis [BR:
etl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114064880 (TARBP1)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114064880 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
Cut8
Ric8
Motif
Other DBs
NCBI-GeneID:
114064880
NCBI-ProteinID:
XP_027754099
LinkDB
All DBs
Position
Unknown
AA seq
1584 aa
AA seq
DB search
MEVVLADTLLSRCGDRAALLRAVCAPLSAERAEALRLLLQRLAAGGPPPPGEAEALRRAA
WEVALERCRPLLRGGDGAAGCGERLRAARAARGALRHCVQLCGAPLADRLARDALAELAA
GGGAGAEEAAVEALVAAAPRLEEPELVARCVAAALALVREEGEGEAAATLVAGRLLPALG
ANGAALPRVWEGLLGEGGTPRAGRALLALSALADALLPRGPPGPGPGLDARLCPRFWRVV
QEGLTERDGLCRKRARYLLKRALDLSSGQRAELRCPPDGGHEPSLFWWSAEKNEQLLQFW
ETYILIMETLEGNQIHVIKPVLPKLNSLYEHAISQDKGCWLFHPSWHMCVYKRMFESENK
TLTKEGILHFLELYETKHLPNSLGFLEFVIGPLMDALSESSLYSRTPSQLIGACPPLGMR
LQKFLATYFMLLPEEEKGSFLLKFIQKMTSRHWCAVPILFLSMALASIPACKVLGVEGLH
ALRNVLQCTMITHQILLRGAAQCYLLQTTMHLTDEEKVSLPEVASFLLSLRPEESLRRDT
LLWTELCSWLQVNDTCFRKSVTSDFEHQETSSLCQYVRSLVEKYFKTPPSERESCFMPDW
FEAKLVATMILLAADVEQMKNKYSGKTNIEWIELEAFLNPLLDVLMKLGSNAYIPTLKTD
KSLQLLLKLLQTRSLKCSNTQDDRVLIFIWKSLLTPVESILEFILRRLTTDELSTVGDLD
RCDLYLALIPEIVRLCLEVDWKKMTPIKNFISSLTNASICNLQERNSEKEPKVKEQIKKV
ASMASLTAVCEIMDQKLEAHLESLPSVDALKKFIFFSQFNEVLKKPSYIEEKSGLCEETT
SQGWGKIVARYLRDQWICLRFILNSFPTLAQGCEETSGMSLSTERSKKILQSALEALTIL
PSDQVLPVFDCMKVLVPKLLDSSESLCIEAFDLAWKIISSLSNTQLIFWSNLKAFVQFIF
DVEVLAVAAIAKGQVYAKIKEIIFKLIDLSTTKTGVFNVVLSHCCQSWMFPSVDERSALK
NAFLNAGNYCELITEACVFGTVFRKDQRLIQDVHAFVENLGEKCAANIVTESTNRDDHYV
RVCAIKFLCLLDGSNMLHKTFMEDIFIKLLDKDEVVSRSRTRYYANSLQHRIKNRIWQTL
LVLLPKLNQNFLCGTLDKVFQAGFSNNQASVKYLIEWIVILSLHKYPQFLNKFWDCFCYD
EEKLKTSICTFLSVLSHFDIILQNTSEKRPALKKALVVVLQWCFNHNFSVRLYALVALKK
IWGMCRMLRVEEFEALTPVIESSLQQVENMHGTGNARRNWQRIQDHFFFATFHPLEDYSL
ETIFYTLPRLAELAEDEWIPLSKFDRFTDIPLPPAFQWYHSRTELRDLKPSDWSQQDMGS
HSAETDSQTEWTDVQKKIIPWKNSTPSLDLEMAFQDRAAKLGKSNSRLIVVASLIDKPTN
LGGLCRTSEIFGASALVVGSLHYIQDKQFQHLSVSAEQWLPLVEVKPCQLVDYLQQKKTE
GYTIIGVEQTAKSYDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLN
VHVSGALLIWEYTRQQVIKQKQQK
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggcggacacgctgctgtcccgctgcggggaccgcgccgcgctgctg
cgggcggtgtgcgcgccgctctccgccgagcgggcggaggcgctgcgcctgctgctgcag
cgcctggccgcgggcgggccgccgccgccgggcgaggcggaggcgctgcggcgggcggcc
tgggaggtggcgctggagcggtgccggccgctgctgcgcggcggggacggggcagcgggg
tgcggggagcggctgcgggcggcgcgggcggcgcggggcgcgctgcggcactgcgtgcag
ctgtgcggggcgccgctggccgacaggctcgcccgcgacgcgctggccgagctggcggcg
ggcggcggggcgggcgcggaggaggcggcggtggaggcgctggtggcggcggcgccgcgg
ctagaggagccggagctggtggcgcggtgcgtggcggcggcgctggcgctggtgcgggag
gagggcgagggcgaggcggcggcgacgctggtagccgggcggctgctgccggcgctgggc
gcgaacggcgcggcgctgccccgcgtctgggaggggctgctgggcgagggcgggacgccg
cgggccgggcgggcgctgctggcgctgagcgccttggcggacgcgctgctgccgaggggt
ccgcccgggccggggccggggctggacgcgcggctgtgcccgcggttctggcgggtggtg
caggagggcctgacggagcgggacgggctgtgccgcaagcgggcccgctacctgctgaag
cgagcgctggacctgagcagcggccagcgcgccgagctgcgctgccccccggacggcgga
cacgagccgagtctgttttggtggtctgctgagaagaatgagcaactcctgcagttttgg
gaaacttatattttgataatggaaactttggaaggaaaccagatccatgtcataaagcca
gtattaccaaaactaaacagtttatatgagcatgccatatcacaggacaaaggttgttgg
ctgtttcacccatcgtggcacatgtgcgtttataaacgaatgtttgagagtgagaataaa
acactgacaaaggaaggcattcttcattttctggagctttatgaaacaaagcatcttcca
aattcacttggtttcttggagtttgttattggaccattaatggatgccctgtcagaaagt
tccctctacagcaggacaccgagtcagttaataggagcctgtcctcctttgggaatgagg
ctacagaagtttttggctacttatttcatgcttcttccagaagaagaaaaaggtagcttc
ttgttaaaatttattcagaagatgacaagtaggcattggtgtgctgttcccattttgttt
ctttctatggctctggcatctatccctgcatgtaaagtacttggcgttgaaggacttcat
gctttaagaaatgtcctccaatgtactatgattacacatcagattttgttgcgtggagct
gctcagtgctatcttcttcaaacaactatgcatttgacagatgaggagaaagtgtctctc
ccagaagttgcaagctttcttctgtcccttagaccagaggagtccctaaggagggatact
ttgttatggacagagctttgcagttggttgcaagtgaatgacacatgcttcagaaagtct
gtaacttctgattttgaacatcaagagacgtcatcattatgtcaatatgtacgcagtctc
gtggaaaagtactttaaaacaccaccatctgaaagagaaagttgctttatgcctgactgg
tttgaagctaaacttgttgcaaccatgattctgttggctgctgatgtggagcagatgaag
aataaatacagtggaaaaaccaacatagaatggattgaactagaggctttcttgaaccct
cttctggatgtcttgatgaaacttggcagtaatgcttacataccaactctgaaaacagat
aaaagcctacagcttctcttgaagttattgcagacccgttcgttaaaatgttccaatacg
caagatgatagggtattgattttcatctggaaatctctcctgacacctgtggagagtatt
cttgaatttattctccgacgtcttactacagatgagctaagcactgttggcgacctggat
cgttgtgatctgtacttagctttaattccagagatagtgcgtttgtgcttggaagtcgac
tggaagaaaatgacacctatcaagaatttcatttcatccctgacaaatgcatctatttgt
aatcttcaggagagaaattccgaaaaggagccgaaggttaaagaacaaattaaaaaagta
gctagcatggcttcacttacagcagtatgtgagataatggatcagaagctggaagcacac
ctggaatccctgccttctgtggatgctctgaagaaatttattttcttttctcaattcaat
gaagtattaaagaaaccatcttatattgaagaaaaaagtggcttatgtgaagaaacaaca
tctcaaggatggggaaaaattgttgcacgctatcttcgtgaccagtggatttgccttcgt
ttcattttaaattcatttccaacactggctcaagggtgtgaagaaacttcaggaatgtca
ttatctacagaaaggtccaaaaaaattctccagtctgcactagaagccctaactattctt
ccttcagaccaagttttacctgtgtttgactgcatgaaagtccttgttccaaagcttctg
gactcatcagagtctctctgcatagaagcatttgatttggcttggaaaattatatcctct
ttgagcaatacacagctaatattttggtccaatctaaaagcttttgttcagttcatcttt
gatgtcgaggtcctcgctgttgctgcaattgcaaagggtcaagtgtatgctaaaataaaa
gagataattttcaagctcatagatctgtccactacaaagactggagtcttcaatgtagtc
cttagtcattgttgtcaatcttggatgtttcctagtgttgatgagagaagtgccttgaaa
aatgctttcttaaatgctggaaattattgtgagcttatcactgaggcttgtgtctttgga
actgtatttaggaaagatcagagacttattcaggatgtgcatgccttcgtagaaaatctt
ggagaaaaatgtgcagcaaacattgttacagaaagtacaaatcgagatgatcactacgtt
cgtgtttgtgctattaaatttctgtgcttgttggatggatcaaatatgttgcataagacg
tttatggaagacattttcatcaaactacttgataaagatgaagtggtatccagatctaga
acacgctattatgcaaactccttacagcatagaattaaaaaccgcatatggcagacgctc
ttagttcttcttccaaagcttaaccagaattttttgtgtggaacccttgacaaagttttt
caggctggattcagtaataatcaggcatctgtgaaatacttgatagaatggattgttatc
ttgagtctacataaatacccccaattcctgaataaattctgggattgcttttgctatgat
gaagaaaagcttaaaacaagcatctgcacatttttatcagtgttatctcactttgacatc
attcttcaaaatacctcagagaagaggccagctttgaagaaagctctcgtagttgttcta
cagtggtgtttcaaccataatttcagtgttcgactttatgcattagttgcccttaaaaaa
atctggggtatgtgcagaatgctgcgtgtagaagaatttgaagctctgacaccagttatt
gaatctagccttcagcaagtggaaaacatgcatggcacagggaatgctagaaggaactgg
cagcgaattcaggatcacttcttctttgcaacatttcatccacttgaggattacagtcta
gagacgatattttacactcttccccgccttgcggaacttgctgaagatgaatggatccca
ctctctaaatttgacagattcactgacattcccttgccaccagcatttcagtggtatcat
tctcgaacggaacttcgtgatctgaaaccaagtgactggtctcagcaagacatgggttca
cattcagctgaaacagatagccagacagaatggactgatgttcagaaaaaaattataccc
tggaaaaacagtactcctagtttagacttggaaatggcatttcaggatcgtgctgctaaa
ctcggtaaatcaaacagcagattgatcgtggtggcttcacttattgataaacctaccaac
ttaggaggtttatgtcgtacaagtgaaatatttggggcatctgcattagttgtcggcagt
cttcattacatacaggataagcagttccagcatcttagtgtttctgcagagcagtggctc
cccctggttgaggtgaaaccgtgtcagcttgttgattatttacagcagaagaaaacagag
ggctacactattattggtgtggagcagacagctaaaagttatgatcttacagaatattgc
ttcccagagaagtcactattattgctgggaaatgaacatgaaggaatcccagcaaacctg
attcaccatctggatgtctgtgtggaaattcctcagcagggtattattcgatcactcaat
gttcacgtaagtggagctctgctgatctgggagtacacaaggcaacaagtgatcaagcaa
aaacaacaaaaataa
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integrated database retrieval system
