KEGG   Empidonax traillii (willow flycatcher): 114064964
Entry
114064964         CDS       T05887                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:etl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114064964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:etl03041]
    114064964
   03036 Chromosome and associated proteins [BR:etl03036]
    114064964
Spliceosome [BR:etl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    114064964
 Complex B
    114064964
 Complex C
   U2 SnRNP specific factors
    114064964
Chromosome and associated proteins [BR:etl03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    114064964
SSDB
Motif
Pfam: SF3b1
Other DBs
NCBI-GeneID: 114064964
NCBI-ProteinID: XP_027754281
LinkDB
Position
Unknown
AA seq 512 aa
MAKIAKTHEDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKK
HRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERDT
PGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTP
AMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVP
IRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVD
ESTLSPEEQKERKIMKLLLKIKNGTPPMRKVR
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggcgaagatcgccaagacccacgaagatattgaagcacaaattcgagaaattcaagga
aaaaagcctgctcttgatgaagcacaaggagtaggccttgattccacaggatattatgat
caagaaatttatggtggcagtgacagcaggtttgctggatatgtcacttctattgcagca
actgaattggaagatgatgatgatgactacccttccaccagtttgctcgggcagaagaag
ccagggtaccacgctccagtggcattgctcaatgacatcccacagtccactgaacagtat
gatccttttgcagaacaccgtcctcaaaagattgcagatcgggaagatgagtacaaaaag
cacaggcggatgatgataatttcccctgagcgtcttgatccttttgcagatggagggaag
actccagatcctaaaatgaatgccagaacatacatggatgttatgcgtgaacagcattta
acgaaagaagagagggaaattaggcaacaactagctgaaaaagctaaagctggagagctt
aaagtcgtcaatggagccgcatctcagccaccttcaaaacgcaaacggcgttgggatcag
acagctgatcagacccctggtgctacacctaaaaaattatccagttgggatcaagcagag
actccaggacataccccatctctgcgatgggatgagactccaggccgtgcaaagggtagc
gaaactcctggtgccaccccaggctcgaaaatatgggatccaactcccagtcacacaccg
gcaggagcagcaacacccggccgggacacgcctggtcacgcaacaccaggccatggaggt
gccacttccagtgcacgtaaaaatcgatgggatgaaacgccaaaaacagaaagagatacc
ccgggccacggcagtggatgggctgagacacctcgcacagacagaggtggtgactccatt
ggtgagaccccaaccccaggagccagcaaaaggaaatcccgatgggatgaaacgcccgcg
agccagatgggtggcagcactcctgtcctgacacctggcaaaacacccattgggacacca
gctatgaacatggcaacacctacgccgggtcatatcatgagcatgactcctgaacagctg
caggcttggcgttgggaaagggaaattgatgagagaaacagacccctttcagatgaggaa
ttggatgccatgtttccagaagggtataaggttcttcccccaccagctggttacgttcct
attcgcaccccagctcggaaacttacggcaactccaacacctttgggagggatgactgga
ttccacatgcagacagaagaccggactatgaagagcgttaatgaccagccatctggaaat
ctgccattcctaaaaccggatgatatccagtactttgataaactgctggttgatgttgat
gaatcaactctgagtcctgaggaacagaaggagagaaaaataatgaaattacttctgaaa
ataaagaatggcacacctcccatgcgaaaggtgagatga

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