Empidonax traillii (willow flycatcher): 114065121
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Entry
114065121 CDS
T05887
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl00310
Lysine degradation
etl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
114065121 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114065121 (PRDM2)
03036 Chromosome and associated proteins [BR:
etl03036
]
114065121 (PRDM2)
Enzymes [BR:
etl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
114065121 (PRDM2)
Transcription factors [BR:
etl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
114065121 (PRDM2)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
114065121 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-H2C2_2
zf-C2H2_ZNF462_1st
zf-C2HE
zf-C2H2_11
zf-MYST
PyrI_C
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
114065121
NCBI-ProteinID:
XP_027754571
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MNQNTTESPVTVETLDDVPEHVLRGLPEDVRLFPSAVDKTRLGVWATKSILKGKKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPEKGNWLRYINWARSGKEQNLFPLEINR
TIYYKSLKPIAAGEELLVWYNGEDDPAIAAAIEEERASARSRRHSPKARRGKKKTQEGKN
KGKKAADTKQKKTDLDSTSADMKDSKEGHKEEDETPSVSAVLSLEQTAVIQEMVNQDVLP
KLMIPSPTNEPQVVTEDKQGEAINCASDDLDDDEEEEDEEEEDEEEMEDANMPKENAEMP
LMCEEKLDSLEEQKSTSEESPENSPKKKLVVKIPKARGESNGDVQETFMFPCQHCERKFT
TKQGLERHMHIHISTLNHAFKCRYCGKAFGTQINRRRHERRHEAGPRRKPFLTLTSSQHP
DNVADNQVIVDDGLKDDLNVPGLAQDSVVLDSEKASQETSNSTFAEENKEPKELHPCKYC
KKVFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPPLPTEPAPAVQSVYIASTEIEEE
GEVDDVYIMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTV
EISSNIKVTQTHVSEPPKEPSSSGSNESKKRRTASPPLVPKIKTEIEPEPITPTSSLNLP
LSISTEGLSFHKEKGVYLSSKLKQLLQTQDSKKITPSGEIPKLGLSVTSSPILPPVSSRF
KRRTSSPPSSPQHSPVLRDFVKSGEGKSVWNDNIRGSKMPKLESHSSSSPAWSVTGREDK
ETLSPHCFDEYKISKDWTAAPTFGNVCNQQPLDLSSGVKQRSDVKSKTQVPWESVLDLSV
HKKPCSDAEARECKENSTQPTCSGVKKKKPTTCMLQKVLLNEYNGTEAAQDGAPGVNSSA
SPGKAPEPQAEPDVDPGLSASSPTDAQPLSSSASPVPQAPAAPPVCQLPPLLTPTNPPSP
PPCPPVLTVATSPPPLLPTMPLPIPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPS
PSPVPSVEPLISAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNL
ESSLPIIKQEEAENEQQKAREDPHTSSDSGVVQETFNKSFVCNVCESPFLSIKDLTKHLS
VHAEEWPFKCEFCVQLFRDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLH
PDKECTHHEFESGTLRPQNFTDPSKANVEHMQSLPEDSLEPSKEEEDEDLNDSSEELYTT
IKIMASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTA
IRCTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKN
AFRRMGQPKRLNFNVEISKMSSNKLKISALKKKNQLVQKAILQKKKSAQQKAEMKNNPSE
SDPHICPYCNREFTYIGSLNKHASYSCPKKPISPSSKKNSSKKSASSSPASSDKGGNQRR
RTADAEIKMQSTQPHLGKTRARTSGPAQLQLPSASFKSKQSVKFVPSMRSKKPNSSSSLR
NSSPVRVSKMSHVEGKKTKVVTKNSSAGMPSKASRKLHVRIQRNNKAVLPSKSAVASKKK
ADRFSVKSRERIGGPITRSLQQAANAEAAENKRDESSTKQELKDFRNLL
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaactgagtctcctgtcactgtggagaccttggatgatgtacctgag
catgtgcttaggggccttcccgaggatgtgaggctcttcccatctgctgtggacaagaca
aggctcggtgtctgggcaacaaaatcaattttaaaaggcaagaagtttggaccatttgtt
ggtgacaagaaaaaaagatctcaagtcaagagcaacgtgtacatgtgggaggtgtattac
cccaacctgggctggatgtgtgtggatgcaacggacccagagaagggcaactggctccga
tacatcaactgggcacgttctggcaaggagcagaatctgtttcctctggagatcaacagg
accatatactacaagagcctaaagccaatcgcggcgggcgaggagctgttggtgtggtac
aatggcgaggacgacccggccatagcggccgcgatcgaggaggagcgagcgagcgcccgc
agccgccggcactccccgaaggcccgcagaggaaagaaaaagactcaggaaggtaaaaac
aagggaaagaaggcagcagatacaaaacagaaaaagactgatttggattctacttctgca
gatatgaaggattctaaagagggtcataaagaggaagatgaaacgccttctgtttctgcc
gtgctctccctggaacaaacagctgtgattcaggaaatggtaaatcaagatgtgcttcca
aagctgatgatccccagtccgaccaacgaaccacaggtggtaactgaagacaaacaagga
gaagcaataaactgtgcatcagatgatttagatgacgatgaagaggaggaggatgaagaa
gaggaagatgaggaggagatggaagatgccaacatgcctaaagaaaatgctgaaatgcct
ctgatgtgcgaagaaaagttggactctctggaagaacaaaagagcacgtcggaggagtcg
ccggaaaactctccaaagaaaaagctggtggtgaaaatcccgaaagcaagaggtgaatcc
aacggtgacgttcaggaaacgttcatgtttccctgtcagcactgtgagaggaagttcaca
acaaaacaagggctcgagcgccacatgcacatccacatatccaccctcaaccacgccttc
aagtgccggtactgcgggaaggccttcggcacccagattaaccggcgaaggcacgagcga
cgccacgaggctgggcccagacggaaacccttcctaaccctgacgtcgtcacaacacccg
gataacgttgctgataaccaggtaatcgtggatgacggtcttaaagacgacctgaacgtt
cccggcctcgcgcaggactccgttgtcttggattctgagaaagcctcccaagaaacgtcc
aactcgacgttcgctgaggagaacaaggagcccaaagaattgcacccctgcaaatactgc
aagaaagtgtttggaactcacaccaacatgaggaggcaccagcgcagggttcatgagcgg
catcttattcccaaaggggtccggagaaaaggattcttcaccgaggagccgccgcttccc
acggagccggcccccgcagtgcagagtgtgtacatagccagcacggagatcgaggaggag
ggggaagtagatgatgtctatattatggatatttccagcaatatctctgagaatttaaat
tattacattgatgggaaaatccagtccaacagcagcacgagcaattgtgatgtgattcag
atggagtccaactctgcagacctgtatgggttgaattgcatcatcagtccggtcacagtg
gaaatttcctccaatataaaggttacacaaacacatgtgagtgaacctcctaaggaaccc
tctagcagtgggagcaacgaatccaaaaagagaagaactgccagccctcctcttgtacca
aaaataaaaactgaaatagagccagaacctataactcctacaagttctttaaatcttcct
cttagcatttcaacagaaggcttatcttttcataaagaaaaaggggtttatttgtcatca
aaattaaagcagcttcttcagacccaggacagtaagaagataactccatcaggtgaaatc
cctaaactaggactttctgttacatcgtcacctattttgcctccagtatccagcaggttt
aaaagaaggaccagctctcctcccagttctccacagcacagtccggtgcttcgagacttt
gtcaaatcaggggagggaaaatctgtgtggaacgataatatccggggctcaaaaatgcca
aagttagaaagccacagcagcagctcacctgcttggagcgtgactggaagggaggacaaa
gagactctgagccctcactgctttgacgaatacaaaatatcaaaagactggacggcagct
ccaacatttggcaacgtgtgcaaccagcagcccctggatttatccagtggtgtgaaacaa
aggtctgatgtcaaaagtaagactcaggtcccctgggagtccgttttagacttgagcgtg
cataagaagccctgcagtgatgccgaggctcgggaatgcaaagaaaactccacacagcca
acgtgtagtggtgttaagaagaagaaaccgaccacgtgcatgttacagaaggtgctgctg
aacgagtacaacgggacagaggcggcccaggacggcgcgccgggggtgaacagcagtgcc
agccctggcaaagccccggagccccaggcagagcccgacgtggatcccgggctctcggca
tcctctcccactgacgctcagcccctcagttcctccgcctcccctgtgccacaggcaccc
gctgccccccccgtgtgccagctgccccccttgttaacccccaccaaccccccctccccg
ccgccctgcccgcccgtgctaacagtcgctacatcgcctcctcccctgctcccaaccatg
cccttacccattccagatgtctctgccagtgccactaacacctcctcctgtccgtcaccg
ctctccaacactactacccagtccccactaccggttctttcacctacggtttctccttct
ccgtcccctgttccttctgttgaacctcttatttctgctgcctcacctggccctcctaca
ctctcttcctcctcttcctcctcctcttcctcctctttctcctcctcctcatcttcatca
tctccatctccgcctcctctttcagtagtttcttctgttgtttcctctgctgataatctt
gaaagttctctcccaataataaaacaggaagaagctgaaaatgagcagcagaaagccaga
gaagatcctcacacttccagtgactcgggagtggtgcaggagaccttcaataagagcttt
gtgtgcaatgtctgcgaatccccttttctttccattaaagacctaacgaagcatttatct
gttcatgctgaagaatggcccttcaaatgtgaattctgtgtccagcttttccgggataaa
acagacctgtcggaacatcgctttctgctccacggagtggggaatatcttcgtttgctcc
gtctgtaaaaaggaattcgcttttttgtgcaatttgcagcagcatcagcgagatctccat
ccagacaaagagtgcacgcaccatgagtttgaaagtgggactttgagaccccagaatttt
actgatcccagtaaggccaacgtggagcacatgcagagcctgccagaagattccctggaa
ccttctaaagaggaggaagatgaagatctaaatgattcctctgaagagctttataccacg
ataaaaataatggcttctggcgtgaaatctaaagatccagatgttcgtatgggcctcaat
caacactacccgagctttaaaccacctccctttcagtatcaccaccgcaatcccatgggc
atcggggttactgccacgaacttcactacccacaatattcctcagacttttactactgcc
attcgatgcacaaaatgtgggaaaagtgttgataacatgcctgagttacacaaacacata
ctggcctgtgcctctgccagtgataaaaagagatacacacctaaaaaaaatccagtgccc
ctcaaacagacagtgcagcctaagaatggcatggtggttatagctgggcctgggaagaac
gccttcagacgaatgggtcagcccaaaagactcaatttcaatgttgagattagcaaaatg
tcctccaacaaactaaaaataagtgcattgaaaaagaaaaaccagcttgtccagaaagct
atcctgcagaaaaagaaatctgcccagcagaaggcggagatgaaaaacaatccatccgag
tcggaccctcacatctgcccctactgcaacagagagttcacctacatcggcagtttgaac
aagcacgcctcatacagctgtcccaaaaaacccatctctccctcctctaaaaagaattct
tccaaaaaaagcgccagctcctcccccgcgagcagcgacaagggcggcaaccagcgccgg
cgaacggcggacgcggaaatcaagatgcagagcactcagccccacctgggcaagacccga
gcacggacctcggggccggcccagctccagctcccctcggcctccttcaagtccaagcag
agcgtgaaattcgtcccttccatgcgctccaaaaagccaaattcctcttcgtccctgagg
aactctagccccgtgagagtgtctaaaatgtcccacgtggaggggaaaaaaactaaggtg
gtcactaagaacagctccgctggaatgcccagcaaagcgtcccgcaaattgcacgtcagg
atacagaggaataacaaagctgttctgccaagcaaatctgctgtggcaagtaaaaaaaag
gcagacaggttcagtgtaaagtctagagagaggattgggggacccatcacacggagcctg
cagcaggcagcaaacgcagaggcagcagaaaacaaaagagatgaaagcagtacaaagcaa
gagctaaaagatttcaggaatctcctgtaa
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integrated database retrieval system
