Empidonax traillii (willow flycatcher): 114065233
Help
Entry
114065233 CDS
T05887
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114065233 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114065233 (HBS1L)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114065233 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GIP1_N
Motif
Other DBs
NCBI-GeneID:
114065233
NCBI-ProteinID:
XP_027754772
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSRHRNVRSYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFPEPLEEEYG
YEGTDDTADYFASSHQLTEVDRARLNSCLDQMREVLAESIPEQAMVQAVLDSNFDVQKAL
DLVLSQGSKQNVKTKNKDAVNLAKTTKGKTRDSESARVESEIVPKITKMTVSGKKQSMGF
EVPCAIAEENGHTNTPQKGLLPEDANVASGVLEAVSKSTLSPQVVRVSEEQNTVPTPAKK
SSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGKCLLEQIDSF
KPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEIPITKG
FPVLLHYQTVSEPATITRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcacaggaacgtccgcagctacaactacgacgaagattttgaagatgatgat
gtgtatggccaatctgtagaagatgattattgcatttctccttcaacagcagctcaattt
atctactccagacgagacaaaccggccacatttcctgagcctttggaagaagaatatggc
tatgaaggtaccgatgatactgctgattattttgcatccagtcatcagttgactgaagtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtccata
ccggaacaagcgatggtgcaagcagtactggatagtaactttgatgtacagaaggctttg
gatcttgtgctttcacaaggcagtaagcaaaatgtgaagaccaagaataaggatgctgtg
aatttagcaaagactacaaaagggaaaacgagggattccgagtcagccagagtggaatct
gaaattgtgccaaaaattaccaaaatgacagtgtctggaaagaaacaatctatgggattt
gaagttccatgtgcgattgctgaagaaaatggccatactaacacacctcagaaaggactg
ttacctgaagatgccaatgtagcttctggggtacttgaggctgtctcaaaatctactctt
tcaccccaagtagtacgggtttcggaagagcagaatacagtgcctactccagcaaaaaag
tcaagcaaggcaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggagga
aagcaactgcttaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatg
ggtcatttgctctaccttttgggaaatgtgaacaaaagaactatgcacaagtatgaacag
gaatccaagaaggccggtaaagcttcgtttgcctatgcgtgggtcttggatgaaactggt
gaagagagagaaaggggagttacaatggatgtgggtatgaccaaattcgagacaaaaact
aaagtaattacactgatggatgctccaggccacaaagacttcattccaaatatgatcacg
ggagctgcgcaggctgatgtggcaattttggttgtggatgctagcagaggagagtttgaa
gcagggtttgagacgggtggacaaactcgagaacatggactattagtgcgctctcttgga
gtgacacagctagctgttgcagtcaataaaatggaccaggtcaattggcaacaagaaaga
tttcaggaaattacgagtaagcttggccaatttcttaagcaagctggctttaaggaatca
gatgttgcttatatcccaacaagtggccttggtggtgaaaatctagtcacaaggggtcag
tcaagtgacctcacacagtggtataaaggaaagtgtttgttagagcaaattgattctttc
aagccaccacagagatcagtggataaaccatttaggctgtgtgttgctgatgtttttaaa
gaccaagggtcaggattttgtgtgactggtaaaatagaagcaggctatattcaagttgga
gaacgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacactgcat
gatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgtgggctgtgtattttgtgatcccaaagaacccattaaagtt
tgcactcggttcagagctcgggttctcatcttcaatattgagattccaatcactaaagga
tttcctgtgcttttacactatcaaacagtaagcgaacctgctactattacaagactgttg
agtgtcctgcacaaaagcactggtgaagtgacaaagaaaaaacctaagttcttgactaaa
ggacagaatgctctaatagaactacagactcaaagacctgttgctctagagttatacaaa
gatttcaaagagctggggagatttatgttacgctacagtggttccactattgctgcagga
gttgttacagagattaaggaatga
DBGET
integrated database retrieval system
